RNA–Protein interactions for RNA: YML092C

PRE8, Transcript of Alpha 2 subunit of the 20S proteasome, yeastyeast

Gene PRE8, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE8YML092C YDL177CQ12257 170 aa3.68□□□□□ -1.82
PRE8YML092C CSR2Q12734 1121 aa3.68□□□□□ -1.82
PRE8YML092C DBP5P20449 482 aaKnown RBP3.67□□□□□ -1.82
PRE8YML092C AIM3P38266 947 aaKnown RBP3.67□□□□□ -1.82
PRE8YML092C RGD1P38339 666 aa3.67□□□□□ -1.82
PRE8YML092C PIK1P39104 1066 aa3.67□□□□□ -1.82
PRE8YML092C HXT13P39924 564 aa3.67□□□□□ -1.82
PRE8YML092C GNP1P48813 663 aa3.67□□□□□ -1.82
PRE8YML092C HXT17P53631 564 aa3.67□□□□□ -1.82
PRE8YML092C HXT15P54854 567 aa3.67□□□□□ -1.82
PRE8YML092C RMD1Q03441 430 aa3.67□□□□□ -1.82
PRE8YML092C CDA2Q06703 312 aa3.67□□□□□ -1.82
PRE8YML092C LYS2P07702 1392 aa3.66□□□□□ -1.82
PRE8YML092C YER152CP10356 443 aa3.66□□□□□ -1.82
PRE8YML092C KRE2P27809 442 aa3.66□□□□□ -1.82
PRE8YML092C RER2P35196 286 aa3.66□□□□□ -1.82
PRE8YML092C APE3P37302 537 aaKnown RBP3.66□□□□□ -1.82
PRE8YML092C RPN3P40016 523 aaKnown RBP3.66□□□□□ -1.82
PRE8YML092C SEC26P41810 973 aaKnown RBP3.66□□□□□ -1.82
PRE8YML092C YFL054CP43549 646 aa3.66□□□□□ -1.82
PRE8YML092C ZDS2P54786 942 aa3.66□□□□□ -1.82
PRE8YML092C TMA46Q12000 345 aaKnown RBP3.66□□□□□ -1.82
PRE8YML092C RRG1Q12167 365 aaPredicted RBP3.66□□□□□ -1.82
PRE8YML092C SSK22P25390 1331 aaPredicted RBP3.66□□□□□ -1.82
PRE8YML092C CBP1P07252 654 aa3.65□□□□□ -1.83
PRE8YML092C TSA1P34760 196 aaKnown RBP3.65□□□□□ -1.83
PRE8YML092C HNT2P49775 206 aa3.65□□□□□ -1.83
PRE8YML092C RRT6P53117 311 aaPredicted RBP3.65□□□□□ -1.83
PRE8YML092C YVH1Q02256 364 aaKnown RBP3.65□□□□□ -1.83
PRE8YML092C TIF35Q04067 274 aaKnown RBP3.65□□□□□ -1.83
PRE8YML092C PDS5Q04264 1277 aa3.65□□□□□ -1.83
PRE8YML092C CRF1Q04930 467 aa3.65□□□□□ -1.83
PRE8YML092C FIG2P25653 1609 aa3.65□□□□□ -1.83
PRE8YML092C FLO11P08640 1367 aa3.64□□□□□ -1.83
PRE8YML092C RPS13P05756 151 aaKnown RBP3.64□□□□□ -1.83
PRE8YML092C SNF5P18480 905 aa3.64□□□□□ -1.83
PRE8YML092C BAS1P22035 811 aa3.64□□□□□ -1.83
PRE8YML092C TOD6P34219 525 aa3.64□□□□□ -1.83
PRE8YML092C BAP2P38084 609 aa3.64□□□□□ -1.83
PRE8YML092C RFC5P38251 354 aa3.64□□□□□ -1.83
PRE8YML092C RRP46P53256 223 aaPredicted RBP3.64□□□□□ -1.83
PRE8YML092C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
PRE8YML092C RSM24Q03976 319 aa3.64□□□□□ -1.83
PRE8YML092C SPP382Q06411 708 aaPredicted RBP3.64□□□□□ -1.83
PRE8YML092C SVS1Q12254 260 aa3.64□□□□□ -1.83
PRE8YML092C PMD1P32634 1753 aa3.63□□□□□ -1.83
PRE8YML092C CYC1P00044 109 aaPredicted RBP3.63□□□□□ -1.83
PRE8YML092C TRP2P00899 507 aaKnown RBP3.63□□□□□ -1.83
PRE8YML092C INO1P11986 533 aa3.63□□□□□ -1.83
PRE8YML092C LYP1P32487 611 aa3.63□□□□□ -1.83
PRE8YML092C SPL2P38839 148 aa3.63□□□□□ -1.83
PRE8YML092C MXR1P40029 184 aa3.63□□□□□ -1.83
PRE8YML092C MPH1P40562 993 aa3.63□□□□□ -1.83
PRE8YML092C MAD1P40957 749 aa3.63□□□□□ -1.83
PRE8YML092C GSM1P42950 618 aa3.63□□□□□ -1.83
PRE8YML092C TYW3P53177 273 aa3.63□□□□□ -1.83
PRE8YML092C RIM8P53179 542 aa3.63□□□□□ -1.83
PRE8YML092C ENV11P53246 860 aa3.63□□□□□ -1.83
PRE8YML092C CWC24P53769 259 aa3.63□□□□□ -1.83
PRE8YML092C FCP1Q03254 732 aa3.63□□□□□ -1.83
PRE8YML092C ROT1Q03691 256 aa3.63□□□□□ -1.83
PRE8YML092C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
PRE8YML092C VPS64Q03944 604 aa3.63□□□□□ -1.83
PRE8YML092C SPO20Q04359 397 aa3.63□□□□□ -1.83
PRE8YML092C RBA50Q04418 439 aa3.63□□□□□ -1.83
PRE8YML092C GNT1Q12096 491 aa3.63□□□□□ -1.83
PRE8YML092C VPS13Q07878 3144 aa3.63□□□□□ -1.83
PRE8YML092C CDC34P14682 295 aa3.62□□□□□ -1.83
PRE8YML092C CMP2P14747 604 aa3.62□□□□□ -1.83
PRE8YML092C PRP6P19735 899 aaPredicted RBP3.62□□□□□ -1.83
PRE8YML092C APL1P27351 700 aa3.62□□□□□ -1.83
PRE8YML092C SPT20P50875 604 aa3.62□□□□□ -1.83
PRE8YML092C MTC3P53077 123 aa3.62□□□□□ -1.83
PRE8YML092C RPT4P53549 437 aaKnown RBP3.62□□□□□ -1.83
PRE8YML092C YNL050CP53952 270 aa3.62□□□□□ -1.83
PRE8YML092C NSE3Q05541 303 aa3.62□□□□□ -1.83
PRE8YML092C SGD1Q06132 899 aa3.62□□□□□ -1.83
PRE8YML092C JIP5Q06214 492 aaPredicted RBP3.62□□□□□ -1.83
PRE8YML092C ESC8Q08119 714 aa3.62□□□□□ -1.83
PRE8YML092C YPL277CQ08989 487 aa3.62□□□□□ -1.83
PRE8YML092C RPL11AP0C0W9 174 aaKnown RBP3.61□□□□□ -1.83
PRE8YML092C KIN2P13186 1147 aaKnown RBP3.61□□□□□ -1.83
PRE8YML092C YKL107WP34251 309 aa3.61□□□□□ -1.83
PRE8YML092C MNR2P35724 969 aa3.61□□□□□ -1.83
PRE8YML092C YGL176CP46945 554 aa3.61□□□□□ -1.83
PRE8YML092C GDE1Q02979 1223 aa3.61□□□□□ -1.83
PRE8YML092C PRP42Q03776 544 aaKnown RBP3.61□□□□□ -1.83
PRE8YML092C RPL11BQ3E757 174 aaPredicted RBP3.61□□□□□ -1.83
PRE8YML092C SOD2P00447 233 aa3.6□□□□□ -1.83
PRE8YML092C CLN2P20438 545 aa3.6□□□□□ -1.83
PRE8YML092C RPS7AP26786 190 aaKnown RBP3.6□□□□□ -1.83
PRE8YML092C MGM1P32266 881 aa3.6□□□□□ -1.83
PRE8YML092C DUT1P33317 147 aa3.6□□□□□ -1.83
PRE8YML092C LAM1P38851 1228 aa3.6□□□□□ -1.83
PRE8YML092C EEB1Q02891 456 aa3.6□□□□□ -1.83
PRE8YML092C YLR225CQ05948 407 aaKnown RBP3.6□□□□□ -1.83
PRE8YML092C VTS1Q08831 523 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
PRE8YML092C BMS1Q08965 1183 aaKnown RBP3.6□□□□□ -1.83
PRE8YML092C ACM1Q08981 209 aa3.6□□□□□ -1.83
PRE8YML092C GAL10P04397 699 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms