RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C OSW2Q12202 724 aa5.54□□□□□ -1.52
VPS71YML041C RIB2Q12362 591 aaKnown RBP5.54□□□□□ -1.52
VPS71YML041C YBR182C-AQ8TGU6 64 aa5.54□□□□□ -1.52
VPS71YML041C YCL002CP25565 263 aa5.53□□□□□ -1.52
VPS71YML041C CCR4P31384 837 aaKnown RBP5.53□□□□□ -1.52
VPS71YML041C SAF1P38352 637 aa5.53□□□□□ -1.52
VPS71YML041C NAB3P38996 802 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
VPS71YML041C OAF1P39720 1047 aaPredicted RBP5.53□□□□□ -1.52
VPS71YML041C TAD1P53065 400 aa5.53□□□□□ -1.52
VPS71YML041C NOG2P53742 486 aaKnown RBP5.53□□□□□ -1.52
VPS71YML041C LRS4Q04087 347 aaKnown RBP5.53□□□□□ -1.52
VPS71YML041C SIZ1Q04195 904 aa5.53□□□□□ -1.52
VPS71YML041C GUP2Q08929 609 aa5.53□□□□□ -1.52
VPS71YML041C YTM1Q12024 460 aaPredicted RBP5.53□□□□□ -1.52
VPS71YML041C FBP1P09201 348 aa5.52□□□□□ -1.53
VPS71YML041C MSB1P21339 1137 aaKnown RBP5.52□□□□□ -1.53
VPS71YML041C DAL7P21826 554 aa5.52□□□□□ -1.53
VPS71YML041C PLC1P32383 869 aa5.52□□□□□ -1.53
VPS71YML041C SEC6P32844 805 aa5.52□□□□□ -1.53
VPS71YML041C PMC1P38929 1173 aaPredicted RBP5.52□□□□□ -1.53
VPS71YML041C AKR1P39010 764 aa5.52□□□□□ -1.53
VPS71YML041C CCT5P40413 562 aaKnown RBP5.52□□□□□ -1.53
VPS71YML041C GZF3P42944 551 aaKnown RBP5.52□□□□□ -1.53
VPS71YML041C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
VPS71YML041C NHX1Q04121 633 aa5.52□□□□□ -1.53
VPS71YML041C RSB1Q08417 382 aa5.52□□□□□ -1.53
VPS71YML041C TMA7Q3E764 64 aaKnown RBP5.52□□□□□ -1.53
VPS71YML041C NOT3P06102 836 aaKnown RBP5.51□□□□□ -1.53
VPS71YML041C PRP19P32523 503 aaKnown RBP5.51□□□□□ -1.53
VPS71YML041C STE13P33894 931 aa5.51□□□□□ -1.53
VPS71YML041C GPP2P40106 250 aaKnown RBP5.51□□□□□ -1.53
VPS71YML041C RLP7P40693 322 aaKnown RBP5.51□□□□□ -1.53
VPS71YML041C NIT2P47016 307 aa5.51□□□□□ -1.53
VPS71YML041C MSC2Q03455 724 aa5.51□□□□□ -1.53
VPS71YML041C NBA1Q08229 501 aaKnown RBP5.51□□□□□ -1.53
VPS71YML041C THI21Q08975 551 aa5.51□□□□□ -1.53
VPS71YML041C SLX4Q12098 748 aa5.51□□□□□ -1.53
VPS71YML041C GLT1Q12680 2145 aaKnown RBP5.51□□□□□ -1.53
VPS71YML041C URA1P28272 314 aaPredicted RBP5.5□□□□□ -1.53
VPS71YML041C SWE1P32944 819 aa5.5□□□□□ -1.53
VPS71YML041C NIT1P40447 199 aa5.5□□□□□ -1.53
VPS71YML041C MNN11P46985 422 aaKnown RBP5.5□□□□□ -1.53
VPS71YML041C YPL034WQ03083 165 aa5.5□□□□□ -1.53
VPS71YML041C SND1Q04007 877 aa5.5□□□□□ -1.53
VPS71YML041C CDA1Q06702 301 aa5.5□□□□□ -1.53
VPS71YML041C YLR122CQ12312 125 aa5.5□□□□□ -1.53
VPS71YML041C ATP4P05626 244 aa5.49□□□□□ -1.53
VPS71YML041C RFC5P38251 354 aa5.49□□□□□ -1.53
VPS71YML041C HXT6P39003 570 aaKnown RBP5.49□□□□□ -1.53
VPS71YML041C HXT7P39004 570 aa5.49□□□□□ -1.53
VPS71YML041C ORC3P54790 616 aa5.49□□□□□ -1.53
VPS71YML041C ECM9Q02202 377 aa5.49□□□□□ -1.53
VPS71YML041C VMS1Q04311 632 aaKnown RBP5.49□□□□□ -1.53
VPS71YML041C YPR196WQ06595 470 aa5.49□□□□□ -1.53
VPS71YML041C TRE2Q08693 809 aa5.49□□□□□ -1.53
VPS71YML041C LPX1Q12405 387 aaKnown RBP5.49□□□□□ -1.53
VPS71YML041C PIF1P07271 859 aa5.48□□□□□ -1.53
VPS71YML041C CYS3P31373 394 aaKnown RBP5.48□□□□□ -1.53
VPS71YML041C HSL7P38274 827 aa5.48□□□□□ -1.53
VPS71YML041C PTC7P38797 343 aa5.48□□□□□ -1.53
VPS71YML041C ALY2P47029 1046 aa5.48□□□□□ -1.53
VPS71YML041C YNL034WP53963 612 aa5.48□□□□□ -1.53
VPS71YML041C YNL018CP53976 612 aa5.48□□□□□ -1.53
VPS71YML041C YKR011CQ02209 353 aa5.48□□□□□ -1.53
VPS71YML041C SSY1Q03770 852 aa5.48□□□□□ -1.53
VPS71YML041C SPS1P08458 490 aa5.47□□□□□ -1.53
VPS71YML041C GCD1P09032 578 aaPredicted RBP5.47□□□□□ -1.53
VPS71YML041C RFA1P22336 621 aaKnown RBP5.47□□□□□ -1.53
VPS71YML041C DPB3P27344 201 aa5.47□□□□□ -1.53
VPS71YML041C RPN10P38886 268 aaKnown RBP5.47□□□□□ -1.53
VPS71YML041C GTS1P40956 396 aa5.47□□□□□ -1.53
VPS71YML041C RET2P43621 546 aa5.47□□□□□ -1.53
VPS71YML041C RAI1P53063 387 aaKnown RBP5.47□□□□□ -1.53
VPS71YML041C PEX14P53112 341 aa5.47□□□□□ -1.53
VPS71YML041C ENV11P53246 860 aa5.47□□□□□ -1.53
VPS71YML041C CEF1Q03654 590 aaPredicted RBP5.47□□□□□ -1.53
VPS71YML041C APM4Q99186 491 aa5.47□□□□□ -1.53
VPS71YML041C HSF1P10961 833 aa5.46□□□□□ -1.54
VPS71YML041C APL1P27351 700 aa5.46□□□□□ -1.54
VPS71YML041C HEM12P32347 362 aaPredicted RBP5.46□□□□□ -1.54
VPS71YML041C DAL3P32459 195 aa5.46□□□□□ -1.54
VPS71YML041C AIM26P32858 118 aa5.46□□□□□ -1.54
VPS71YML041C DID4P36108 232 aa5.46□□□□□ -1.54
VPS71YML041C PEA2P40091 420 aa5.46□□□□□ -1.54
VPS71YML041C BNA2P47125 453 aa5.46□□□□□ -1.54
VPS71YML041C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
VPS71YML041C UBC9P50623 157 aaPredicted RBP5.46□□□□□ -1.54
VPS71YML041C HFI1Q12060 488 aa5.46□□□□□ -1.54
VPS71YML041C YLR149CQ99296 730 aa5.46□□□□□ -1.54
VPS71YML041C DIF1O13577 133 aa5.45□□□□□ -1.54
VPS71YML041C RPD3P32561 433 aa5.45□□□□□ -1.54
VPS71YML041C TFC4P33339 1025 aa5.45□□□□□ -1.54
VPS71YML041C VPS24P36095 224 aaKnown RBP5.45□□□□□ -1.54
VPS71YML041C CEP3P40969 608 aa5.45□□□□□ -1.54
VPS71YML041C SSL1Q04673 461 aaPredicted RBP5.45□□□□□ -1.54
VPS71YML041C MPD2Q99316 277 aa5.45□□□□□ -1.54
VPS71YML041C SST2P11972 698 aaKnown RBP5.44□□□□□ -1.54
VPS71YML041C KIN2P13186 1147 aaKnown RBP5.44□□□□□ -1.54
VPS71YML041C CHS2P14180 963 aa5.44□□□□□ -1.54
VPS71YML041C AEP2P22136 580 aa5.44□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 102.4 ms