RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT23	YKL020C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
SPT23	YKL020C	CCT3	P39077	534 aa	Known RBP	4.19	□□□□□ -1.74
SPT23	YKL020C	RGA1	P39083	1007 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	MBP1	P39678	833 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	NUP85	P46673	744 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	MDR1	P53258	950 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	UBP2	Q01476	1272 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	TFB2	Q02939	513 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	CWC15	Q03772	175 aa	Known RBP	4.19	□□□□□ -1.74
SPT23	YKL020C	YPL191C	Q08930	360 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	TRM8	Q12009	286 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	URB1	P34241	1764 aa	Known RBP	4.19	□□□□□ -1.74
SPT23	YKL020C	BUD3	P25558	1636 aa		4.18	□□□□□ -1.74
SPT23	YKL020C	VAS1	P07806	1104 aa	Known RBP	4.18	□□□□□ -1.74
SPT23	YKL020C	DAL80	P26343	269 aa		4.18	□□□□□ -1.74
SPT23	YKL020C	RIB7	P33312	244 aa		4.18	□□□□□ -1.74
SPT23	YKL020C	CSE4	P36012	229 aa		4.18	□□□□□ -1.74
SPT23	YKL020C	TRS85	P46944	698 aa		4.18	□□□□□ -1.74
SPT23	YKL020C	MDV1	P47025	714 aa		4.18	□□□□□ -1.74
SPT23	YKL020C	VIP1	Q06685	1146 aa	Known RBP	4.18	□□□□□ -1.74
SPT23	YKL020C	KSS1	P14681	368 aa		4.18	□□□□□ -1.74
SPT23	YKL020C	RPC19	P28000	142 aa	Known RBP	4.18	□□□□□ -1.74
SPT23	YKL020C	ATO2	P32907	282 aa		4.18	□□□□□ -1.74
SPT23	YKL020C	JNM1	P36224	373 aa		4.18	□□□□□ -1.74
SPT23	YKL020C	HSE1	P38753	452 aa		4.18	□□□□□ -1.74
SPT23	YKL020C	CCC2	P38995	1004 aa		4.18	□□□□□ -1.74
SPT23	YKL020C	POP2	P39008	433 aa		4.18	□□□□□ -1.74
SPT23	YKL020C	GVP36	P40531	326 aa	Known RBP	4.18	□□□□□ -1.74
SPT23	YKL020C	ROK1	P45818	564 aa	Predicted RBP	4.18	□□□□□ -1.74
SPT23	YKL020C	APT1	P49435	187 aa	Known RBP	4.18	□□□□□ -1.74
SPT23	YKL020C	UBP15	P50101	1230 aa		4.18	□□□□□ -1.74
SPT23	YKL020C	DON1	Q05610	365 aa		4.18	□□□□□ -1.74
SPT23	YKL020C	SYO1	Q07395	620 aa		4.18	□□□□□ -1.74
SPT23	YKL020C	RTT109	Q07794	436 aa		4.18	□□□□□ -1.74
SPT23	YKL020C	YOR296W	Q08748	1289 aa		4.18	□□□□□ -1.74
SPT23	YKL020C	YMR084W	A2P2R3	262 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	PGK1	P00560	416 aa	Known RBP	4.17	□□□□□ -1.74
SPT23	YKL020C	ADE8	P04161	214 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	YML002W	P0CF17	737 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	ITR2	P30606	609 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	AFR1	P33304	620 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	FYV10	P40492	516 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	YIL055C	P40523	627 aa	Known RBP	4.17	□□□□□ -1.74
SPT23	YKL020C	MDJ2	P42834	146 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	MIC19	P43594	170 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	POL31	P46957	487 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	YGR067C	P53243	804 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	YKR005C	Q02203	525 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	TFB3	Q03290	321 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	WAR1	Q03631	944 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	TAF11	Q04226	346 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	DYN3	Q04949	312 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	YCG1	Q06680	1035 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	YOL036W	Q08206	761 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	ALR1	Q08269	859 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	RTT10	Q08924	1013 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	RRP6	Q12149	733 aa	Known RBP	4.17	□□□□□ -1.74
SPT23	YKL020C	RSC6	P25632	483 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	GRX4	P32642	244 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	STO1	P34160	861 aa	Known RBP	4.17	□□□□□ -1.74
SPT23	YKL020C	PRX1	P34227	261 aa	Known RBP	4.17	□□□□□ -1.74
SPT23	YKL020C	CTM1	P38818	585 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	YEL023C	P39992	682 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	ALD5	P40047	520 aa	Known RBP	4.17	□□□□□ -1.74
SPT23	YKL020C	RET2	P43621	546 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	RAT1	Q02792	1006 aa	Known RBP	4.17	□□□□□ -1.74
SPT23	YKL020C	MCP2	Q06567	569 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	NOP12	Q08208	459 aa	Known RBP	4.17	□□□□□ -1.74
SPT23	YKL020C	YPR089W	O13585	888 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	RSR1	P13856	272 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	CKA2	P19454	339 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	ALG14	P38242	237 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	REV7	P38927	245 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	SCS2	P40075	244 aa	Known RBP	4.17	□□□□□ -1.74
SPT23	YKL020C	PCL10	P53124	433 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	YDR286C	Q05530	114 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	TMA16	Q08687	178 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	OCA6	Q12454	224 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	TUS1	Q06412	1307 aa		4.17	□□□□□ -1.74
SPT23	YKL020C	YRF1-2	P40105	1681 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	ILS1	P09436	1072 aa	Known RBP	4.16	□□□□□ -1.74
SPT23	YKL020C	DSF1	P0CX08	502 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	YNR073C	P0CX09	502 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	POL4	P25615	582 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	URA1	P28272	314 aa	Predicted RBP	4.16	□□□□□ -1.74
SPT23	YKL020C	DOM34	P33309	386 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	PEX6	P33760	1030 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	UTP11	P34247	250 aa	Predicted RBP	4.16	□□□□□ -1.74
SPT23	YKL020C	ATP3	P38077	311 aa	Known RBP	4.16	□□□□□ -1.74
SPT23	YKL020C	PTC4	P38089	393 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	ATG32	P40458	529 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	ALB1	P47019	175 aa	Predicted RBP	4.16	□□□□□ -1.74
SPT23	YKL020C	BBC1	P47068	1157 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	GIM3	P53900	129 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	FDC1	Q03034	503 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	HAS1	Q03532	505 aa	Known RBP	4.16	□□□□□ -1.74
SPT23	YKL020C	MCD1	Q12158	566 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	PHM7	Q12252	991 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	REP1	P03871	373 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	GPA1	P08539	472 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 75.8 ms