RNA–Protein interactions for RNA: YJR092W

BUD4, Transcript of Anillin-like protein involved in bud-site selection, yeast

Gene BUD4, Length 4,344 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD4	YJR092W	RTT109	Q07794	436 aa		3.15	□□□□□ -1.91
BUD4	YJR092W	YLL054C	Q12244	843 aa		3.15	□□□□□ -1.91
BUD4	YJR092W	CMR1	Q12510	522 aa	Known RBP	3.15	□□□□□ -1.91
BUD4	YJR092W	SPS1	P08458	490 aa		3.15	□□□□□ -1.91
BUD4	YJR092W	SEC63	P14906	663 aa		3.15	□□□□□ -1.91
BUD4	YJR092W	YDJ1	P25491	409 aa	Known RBP	3.15	□□□□□ -1.91
BUD4	YJR092W	BUD14	P27637	709 aa		3.15	□□□□□ -1.91
BUD4	YJR092W	DBF4	P32325	704 aa		3.15	□□□□□ -1.91
BUD4	YJR092W	YME1	P32795	747 aa		3.15	□□□□□ -1.91
BUD4	YJR092W	COX13	P32799	129 aa		3.15	□□□□□ -1.91
BUD4	YJR092W	TEF4	P36008	412 aa	Known RBP	3.15	□□□□□ -1.91
BUD4	YJR092W	LDH1	P38139	375 aa		3.15	□□□□□ -1.91
BUD4	YJR092W	THO1	P40040	218 aa	Known RBP	3.15	□□□□□ -1.91
BUD4	YJR092W	UTP18	P40362	594 aa	Predicted RBP	3.15	□□□□□ -1.91
BUD4	YJR092W	ROG3	P43602	733 aa		3.15	□□□□□ -1.91
BUD4	YJR092W	CHA4	P43634	648 aa		3.15	□□□□□ -1.91
BUD4	YJR092W	ALF1	P53904	254 aa		3.15	□□□□□ -1.91
BUD4	YJR092W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	RIP-Chip
BUD4	YJR092W	SRL4	Q03085	281 aa		3.15	□□□□□ -1.91
BUD4	YJR092W	SPC19	Q03954	165 aa		3.15	□□□□□ -1.91
BUD4	YJR092W	MLH2	Q07980	695 aa		3.15	□□□□□ -1.91
BUD4	YJR092W	COQ4	O13525	335 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	SUP45	P12385	437 aa	Known RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	SNT1	P25357	1226 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	RPC19	P28000	142 aa	Known RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	NOP4	P37838	685 aa	Known RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	PFF1	P38244	976 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	YHL041W	P38730	149 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	VAC8	P39968	578 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	MIC19	P43594	170 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	YPT11	P48559	417 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	SPC105	P53148	917 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	GOR1	P53839	350 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	GTR1	Q00582	310 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	MDM1	Q01846	1127 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	RPT6	Q01939	405 aa	Known RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	UTP6	Q02354	440 aa	Known RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	FMP25	Q08023	583 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	ATG9	Q12142	997 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	CBS2	P14905	389 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	GAP1	P19145	602 aa	Predicted RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	OSM1	P21375	501 aa	Known RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	GIC1	P38785	314 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	APE4	P38821	490 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	TIF4631	P39935	952 aa	Known RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	ATG3	P40344	310 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	NMD5	P46970	1048 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	MCM6	P53091	1017 aa	Known RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	CUS1	Q02554	436 aa	Predicted RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	JIP4	Q03361	876 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	BUL2	Q03758	920 aa	Known RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	DPL1	Q05567	589 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	RSC3	Q06639	885 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	NOB1	Q08444	459 aa	Known RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	APL4	Q12028	832 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	RIM20	Q12033	661 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	TRP2	P00899	507 aa	Known RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	TUF1	P02992	437 aa	Known RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	CBP2	P03874	630 aa	Predicted RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	POL3	P15436	1097 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	HSP60	P19882	572 aa	Known RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	RPS5	P26783	225 aa	Known RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	PRM9	P39551	298 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	FTR1	P40088	404 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	YFH7	P43591	353 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	ARC1	P46672	376 aa	Known RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	YJR079W	P47126	109 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	UTP8	P53276	713 aa	Known RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	MRS2	Q01926	470 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	SHR3	Q02774	210 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	TIM50	Q02776	476 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	SPP1	Q03012	353 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	PRP42	Q03776	544 aa	Known RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	ITT1	Q04638	464 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	RSA3	Q05942	220 aa	Known RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	RRP9	Q06506	573 aa	Known RBP	3.14	□□□□□ -1.91
BUD4	YJR092W	APC11	Q12157	165 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	NCR1	Q12200	1170 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	ADF1	Q2V2Q1	113 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	LAG2	Q92325	660 aa		3.14	□□□□□ -1.91
BUD4	YJR092W	NMT1	P14743	455 aa		3.13	□□□□□ -1.91
BUD4	YJR092W	MIH1	P23748	554 aa		3.13	□□□□□ -1.91
BUD4	YJR092W	CMK1	P27466	446 aa	Known RBP	3.13	□□□□□ -1.91
BUD4	YJR092W	TCA17	P32613	152 aa		3.13	□□□□□ -1.91
BUD4	YJR092W	RPN10	P38886	268 aa	Known RBP	3.13	□□□□□ -1.91
BUD4	YJR092W	SHE4	P51534	789 aa		3.13	□□□□□ -1.91
BUD4	YJR092W	RRT6	P53117	311 aa	Predicted RBP	3.13	□□□□□ -1.91
BUD4	YJR092W	YNL058C	P53947	316 aa		3.13	□□□□□ -1.91
BUD4	YJR092W	RPS15	Q01855	142 aa	Known RBP	3.13	□□□□□ -1.91
BUD4	YJR092W	YPL109C	Q02981	657 aa		3.13	□□□□□ -1.91
BUD4	YJR092W	PPN1	Q04119	674 aa		3.13	□□□□□ -1.91
BUD4	YJR092W	VTA1	Q06263	330 aa		3.13	□□□□□ -1.91
BUD4	YJR092W	PSR2	Q07949	397 aa		3.13	□□□□□ -1.91
BUD4	YJR092W	RKM4	Q12504	494 aa		3.13	□□□□□ -1.91
BUD4	YJR092W	RAD61	Q99359	647 aa		3.13	□□□□□ -1.91
BUD4	YJR092W	RPO21	P04050	1733 aa	Known RBP	3.13	□□□□□ -1.91
BUD4	YJR092W	SPT2	P06843	333 aa	Predicted RBP	3.13	□□□□□ -1.91
BUD4	YJR092W	SIT4	P20604	311 aa		3.13	□□□□□ -1.91
BUD4	YJR092W	HES1	P35843	434 aa		3.13	□□□□□ -1.91
BUD4	YJR092W	TRZ1	P36159	838 aa	Predicted RBP	3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 80.6 ms