RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C ALT2P52892 507 aa3.95□□□□□ -1.78
VPS53YJL029C SDA1P53313 767 aaKnown RBP3.95□□□□□ -1.78
VPS53YJL029C YNL115CP53925 644 aa3.95□□□□□ -1.78
VPS53YJL029C YRR1Q12172 810 aa3.95□□□□□ -1.78
VPS53YJL029C OSW2Q12202 724 aa3.95□□□□□ -1.78
VPS53YJL029C PTC5Q12511 572 aa3.95□□□□□ -1.78
VPS53YJL029C SUP45P12385 437 aaKnown RBP3.94□□□□□ -1.78
VPS53YJL029C GLN3P18494 730 aa3.94□□□□□ -1.78
VPS53YJL029C DBP5P20449 482 aaKnown RBP3.94□□□□□ -1.78
VPS53YJL029C YSC83P32792 385 aa3.94□□□□□ -1.78
VPS53YJL029C PRX1P34227 261 aaKnown RBP3.94□□□□□ -1.78
VPS53YJL029C MAL33P38157 468 aa3.94□□□□□ -1.78
VPS53YJL029C YHL026CP38740 315 aa3.94□□□□□ -1.78
VPS53YJL029C PGA2P53903 129 aa3.94□□□□□ -1.78
VPS53YJL029C YNL034WP53963 612 aa3.94□□□□□ -1.78
VPS53YJL029C YNL018CP53976 612 aa3.94□□□□□ -1.78
VPS53YJL029C DOT1Q04089 582 aaKnown RBP3.94□□□□□ -1.78
VPS53YJL029C YLH47Q06493 454 aa3.94□□□□□ -1.78
VPS53YJL029C NOB1Q08444 459 aaKnown RBP3.94□□□□□ -1.78
VPS53YJL029C YLR422WQ06409 1932 aa3.94□□□□□ -1.78
VPS53YJL029C RAS1P01119 309 aa3.94□□□□□ -1.78
VPS53YJL029C HIP1P06775 603 aa3.94□□□□□ -1.78
VPS53YJL029C YEL076C-AP0CX16 216 aa3.94□□□□□ -1.78
VPS53YJL029C YLR464WP0CX17 216 aa3.94□□□□□ -1.78
VPS53YJL029C PDR1P12383 1068 aa3.94□□□□□ -1.78
VPS53YJL029C CDC48P25694 835 aaKnown RBP3.94□□□□□ -1.78
VPS53YJL029C DRE2P36152 348 aa3.94□□□□□ -1.78
VPS53YJL029C YHR202WP38887 602 aa3.94□□□□□ -1.78
VPS53YJL029C YEL076CP39971 216 aa3.94□□□□□ -1.78
VPS53YJL029C LAM5P43560 674 aa3.94□□□□□ -1.78
VPS53YJL029C VID30P53076 958 aa3.94□□□□□ -1.78
VPS53YJL029C CUL3P53202 744 aa3.94□□□□□ -1.78
VPS53YJL029C RTT102P53330 157 aa3.94□□□□□ -1.78
VPS53YJL029C DIP5P53388 608 aa3.94□□□□□ -1.78
VPS53YJL029C IES4Q08561 116 aa3.94□□□□□ -1.78
VPS53YJL029C DAP1Q12091 152 aa3.94□□□□□ -1.78
VPS53YJL029C LSP1Q12230 341 aaKnown RBP3.94□□□□□ -1.78
VPS53YJL029C YMR084WA2P2R3 262 aa3.93□□□□□ -1.78
VPS53YJL029C UBP13P38187 747 aa3.93□□□□□ -1.78
VPS53YJL029C UBX7P38349 436 aa3.93□□□□□ -1.78
VPS53YJL029C YHR131CP38835 850 aa3.93□□□□□ -1.78
VPS53YJL029C UBA2P52488 636 aa3.93□□□□□ -1.78
VPS53YJL029C SPO71Q03868 1245 aa3.93□□□□□ -1.78
VPS53YJL029C TFB4Q12004 338 aa3.93□□□□□ -1.78
VPS53YJL029C RPS9AO13516 197 aaKnown RBP3.93□□□□□ -1.78
VPS53YJL029C HXK1P04806 485 aaKnown RBP3.93□□□□□ -1.78
VPS53YJL029C ISY1P21374 235 aaPredicted RBP3.93□□□□□ -1.78
VPS53YJL029C URA1P28272 314 aaPredicted RBP3.93□□□□□ -1.78
VPS53YJL029C CYS3P31373 394 aaKnown RBP3.93□□□□□ -1.78
VPS53YJL029C HIR1P32479 840 aa3.93□□□□□ -1.78
VPS53YJL029C VPH1P32563 840 aaKnown RBP3.93□□□□□ -1.78
VPS53YJL029C YFL052WP43551 465 aa3.93□□□□□ -1.78
VPS53YJL029C ACF4P47129 309 aa3.93□□□□□ -1.78
VPS53YJL029C MNP1P53163 194 aaPredicted RBP3.93□□□□□ -1.78
VPS53YJL029C VPS20Q04272 221 aa3.93□□□□□ -1.78
VPS53YJL029C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
VPS53YJL029C CDC53Q12018 815 aaKnown RBP3.93□□□□□ -1.78
VPS53YJL029C YDR034W-BQ6Q5X2 51 aa3.93□□□□□ -1.78
VPS53YJL029C HIS4P00815 799 aaKnown RBP3.92□□□□□ -1.78
VPS53YJL029C TUF1P02992 437 aaKnown RBP3.92□□□□□ -1.78
VPS53YJL029C PHO8P11491 566 aa3.92□□□□□ -1.78
VPS53YJL029C BIK1P11709 440 aa3.92□□□□□ -1.78
VPS53YJL029C PFK1P16861 987 aaKnown RBP3.92□□□□□ -1.78
VPS53YJL029C ELM1P32801 640 aa3.92□□□□□ -1.78
VPS53YJL029C MNN4P36044 1178 aa3.92□□□□□ -1.78
VPS53YJL029C INP51P40559 946 aaKnown RBP3.92□□□□□ -1.78
VPS53YJL029C MVP1P40959 511 aaKnown RBP3.92□□□□□ -1.78
VPS53YJL029C YNL146WP53906 100 aa3.92□□□□□ -1.78
VPS53YJL029C NIS1P53939 407 aa3.92□□□□□ -1.78
VPS53YJL029C EIS1Q05050 843 aaKnown RBP3.92□□□□□ -1.78
VPS53YJL029C NOC3Q07896 663 aaPredicted RBP3.92□□□□□ -1.78
VPS53YJL029C YPR015CQ12531 247 aa3.92□□□□□ -1.78
VPS53YJL029C PRT1P06103 763 aaKnown RBP3.92□□□□□ -1.78
VPS53YJL029C ATP1P07251 545 aaKnown RBP3.92□□□□□ -1.78
VPS53YJL029C CAD1P24813 409 aaKnown RBP3.92□□□□□ -1.78
VPS53YJL029C PAT1P25644 796 aaKnown RBP3.92□□□□□ -1.78
VPS53YJL029C URK1P27515 501 aa3.92□□□□□ -1.78
VPS53YJL029C MMS4P38257 691 aa3.92□□□□□ -1.78
VPS53YJL029C BDH2P39713 417 aa3.92□□□□□ -1.78
VPS53YJL029C FMP10P40098 244 aa3.92□□□□□ -1.78
VPS53YJL029C EMI2Q04409 500 aaKnown RBP3.92□□□□□ -1.78
VPS53YJL029C DNL4Q08387 944 aaPredicted RBP3.92□□□□□ -1.78
VPS53YJL029C YPL277CQ08989 487 aa3.92□□□□□ -1.78
VPS53YJL029C RAD59Q12223 238 aa3.92□□□□□ -1.78
VPS53YJL029C HAP2P06774 265 aa3.91□□□□□ -1.78
VPS53YJL029C SPT16P32558 1035 aaKnown RBP3.91□□□□□ -1.78
VPS53YJL029C KDX1P36005 433 aa3.91□□□□□ -1.78
VPS53YJL029C HMT1P38074 348 aa3.91□□□□□ -1.78
VPS53YJL029C NPP2P39997 493 aa3.91□□□□□ -1.78
VPS53YJL029C NPA3P47122 385 aa3.91□□□□□ -1.78
VPS53YJL029C HST1P53685 503 aa3.91□□□□□ -1.78
VPS53YJL029C VTC3Q02725 835 aa3.91□□□□□ -1.78
VPS53YJL029C DON1Q05610 365 aa3.91□□□□□ -1.78
VPS53YJL029C ADY4Q05955 493 aa3.91□□□□□ -1.78
VPS53YJL029C ETT1Q08421 412 aaKnown RBP3.91□□□□□ -1.78
VPS53YJL029C TCO89Q08921 799 aa3.91□□□□□ -1.78
VPS53YJL029C SPE3Q12074 293 aaKnown RBP3.91□□□□□ -1.78
VPS53YJL029C PUS1Q12211 544 aaKnown RBP3.91□□□□□ -1.78
VPS53YJL029C MAK16P10962 306 aaPredicted RBP3.9□□□□□ -1.78
VPS53YJL029C RDS1P25611 832 aa3.9□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 86.7 ms