RNA–Protein interactions for RNA: YIL167W

SDL1, Transcript of Open reading frame unlikely to produce a functional protein in S288C, yeast

Gene SDL1, Length 633 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDL1	YIL167W	MPH2	P0CD99	609 aa		4.28	□□□□□ -1.72
SDL1	YIL167W	RFA1	P22336	621 aa	Known RBP	4.28	□□□□□ -1.72
SDL1	YIL167W	SED4	P25365	1065 aa		4.28	□□□□□ -1.72
SDL1	YIL167W	PMI40	P29952	429 aa	Known RBP	4.28	□□□□□ -1.72
SDL1	YIL167W	STE14	P32584	239 aa		4.28	□□□□□ -1.72
SDL1	YIL167W	RSP5	P39940	809 aa	Known RBP	4.28	□□□□□ -1.72
SDL1	YIL167W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
SDL1	YIL167W	ENV7	Q12003	364 aa		4.28	□□□□□ -1.72
SDL1	YIL167W	TUB2	P02557	457 aa	Known RBP	4.27	□□□□□ -1.73
SDL1	YIL167W	TOP3	P13099	656 aa		4.27	□□□□□ -1.73
SDL1	YIL167W	GAL11	P19659	1081 aa		4.27	□□□□□ -1.73
SDL1	YIL167W	URA1	P28272	314 aa	Predicted RBP	4.27	□□□□□ -1.73
SDL1	YIL167W	TYE7	P33122	291 aa	Predicted RBP	4.27	□□□□□ -1.73
SDL1	YIL167W	ERT1	P38140	529 aa		4.27	□□□□□ -1.73
SDL1	YIL167W	CHZ1	P40019	153 aa	Predicted RBP	4.27	□□□□□ -1.73
SDL1	YIL167W	NIT3	P49954	291 aa		4.27	□□□□□ -1.73
SDL1	YIL167W	YKR011C	Q02209	353 aa		4.27	□□□□□ -1.73
SDL1	YIL167W	WHI4	Q07655	649 aa	Known RBP	4.27	□□□□□ -1.73
SDL1	YIL167W	CDC53	Q12018	815 aa	Known RBP	4.27	□□□□□ -1.73
SDL1	YIL167W	CAN1	P04817	590 aa		4.26	□□□□□ -1.73
SDL1	YIL167W	DEF1	P35732	738 aa	Known RBP	4.26	□□□□□ -1.73
SDL1	YIL167W	EMC3	P36039	253 aa		4.26	□□□□□ -1.73
SDL1	YIL167W	SDP1	P40479	209 aa		4.26	□□□□□ -1.73
SDL1	YIL167W	DAM1	P53267	343 aa		4.26	□□□□□ -1.73
SDL1	YIL167W	NOG2	P53742	486 aa	Known RBP	4.26	□□□□□ -1.73
SDL1	YIL167W	HDA1	P53973	706 aa		4.26	□□□□□ -1.73
SDL1	YIL167W	SSL1	Q04673	461 aa	Predicted RBP	4.26	□□□□□ -1.73
SDL1	YIL167W	YOR131C	Q12486	218 aa		4.26	□□□□□ -1.73
SDL1	YIL167W	TOM70	P07213	617 aa	Known RBP	4.25	□□□□□ -1.73
SDL1	YIL167W	PFK1	P16861	987 aa	Known RBP	4.25	□□□□□ -1.73
SDL1	YIL167W	KAR4	P25583	335 aa		4.25	□□□□□ -1.73
SDL1	YIL167W	BET3	P36149	193 aa		4.25	□□□□□ -1.73
SDL1	YIL167W	CTF8	P38877	133 aa		4.25	□□□□□ -1.73
SDL1	YIL167W	YIL108W	P40483	696 aa	Known RBP	4.25	□□□□□ -1.73
SDL1	YIL167W	RPN4	Q03465	531 aa		4.25	□□□□□ -1.73
SDL1	YIL167W	SRP40	P32583	406 aa	Predicted RBP	4.24	□□□□□ -1.73
SDL1	YIL167W	CEP3	P40969	608 aa		4.24	□□□□□ -1.73
SDL1	YIL167W	ALG2	P43636	503 aa		4.24	□□□□□ -1.73
SDL1	YIL167W	PHO23	P50947	330 aa		4.24	□□□□□ -1.73
SDL1	YIL167W	RTA1	P53047	317 aa		4.24	□□□□□ -1.73
SDL1	YIL167W	YGR283C	P53336	341 aa	Predicted RBP	4.24	□□□□□ -1.73
SDL1	YIL167W	PPM2	Q08282	695 aa		4.24	□□□□□ -1.73
SDL1	YIL167W	PUS9	Q12069	462 aa		4.24	□□□□□ -1.73
SDL1	YIL167W	RPS9A	O13516	197 aa	Known RBP	4.23	□□□□□ -1.73
SDL1	YIL167W	RPD3	P32561	433 aa		4.23	□□□□□ -1.73
SDL1	YIL167W	MSE1	P48525	536 aa		4.23	□□□□□ -1.73
SDL1	YIL167W	ATP25	Q03153	612 aa		4.23	□□□□□ -1.73
SDL1	YIL167W	REH1	Q06709	432 aa		4.23	□□□□□ -1.73
SDL1	YIL167W	CYS3	P31373	394 aa	Known RBP	4.22	□□□□□ -1.73
SDL1	YIL167W	AIM39	Q08223	395 aa		4.22	□□□□□ -1.73
SDL1	YIL167W	LAS17	Q12446	633 aa		4.22	□□□□□ -1.73
SDL1	YIL167W	TRP4	P07285	380 aa	Predicted RBP	4.21	□□□□□ -1.74
SDL1	YIL167W	SEC21	P32074	935 aa	Known RBP	4.21	□□□□□ -1.74
SDL1	YIL167W	YHR078W	P38799	552 aa		4.21	□□□□□ -1.74
SDL1	YIL167W	MSS4	P38994	779 aa		4.21	□□□□□ -1.74
SDL1	YIL167W	AIM21	P40563	679 aa		4.21	□□□□□ -1.74
SDL1	YIL167W	BUD6	P41697	788 aa		4.21	□□□□□ -1.74
SDL1	YIL167W	GYP8	P43570	497 aa		4.21	□□□□□ -1.74
SDL1	YIL167W	PUS2	P53167	370 aa		4.21	□□□□□ -1.74
SDL1	YIL167W	SLU7	Q02775	382 aa	Known RBP	4.21	□□□□□ -1.74
SDL1	YIL167W	YDR514C	Q04408	483 aa		4.21	□□□□□ -1.74
SDL1	YIL167W	SWM1	Q12379	170 aa		4.21	□□□□□ -1.74
SDL1	YIL167W	PNS1	Q12412	539 aa		4.21	□□□□□ -1.74
SDL1	YIL167W	DAL7	P21826	554 aa		4.2	□□□□□ -1.74
SDL1	YIL167W	HRR25	P29295	494 aa	Known RBP	4.2	□□□□□ -1.74
SDL1	YIL167W	YKL091C	P33324	310 aa	Known RBP	4.2	□□□□□ -1.74
SDL1	YIL167W	SPC29	P33419	253 aa		4.2	□□□□□ -1.74
SDL1	YIL167W	KTR4	P38131	464 aa		4.2	□□□□□ -1.74
SDL1	YIL167W	GDH3	P39708	457 aa		4.2	□□□□□ -1.74
SDL1	YIL167W	SUN4	P53616	420 aa		4.2	□□□□□ -1.74
SDL1	YIL167W	PEX19	Q07418	342 aa		4.2	□□□□□ -1.74
SDL1	YIL167W	TRM11	Q12463	433 aa		4.2	□□□□□ -1.74
SDL1	YIL167W	TUB3	P09734	445 aa	Known RBP	4.19	□□□□□ -1.74
SDL1	YIL167W	CAD1	P24813	409 aa	Known RBP	4.19	□□□□□ -1.74
SDL1	YIL167W	EFT1	P32324	842 aa	Known RBP	4.19	□□□□□ -1.74
SDL1	YIL167W	CTF13	P35203	478 aa		4.19	□□□□□ -1.74
SDL1	YIL167W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
SDL1	YIL167W	CHS7	P38843	316 aa		4.19	□□□□□ -1.74
SDL1	YIL167W	BUL1	P48524	976 aa		4.19	□□□□□ -1.74
SDL1	YIL167W	TAD1	P53065	400 aa		4.19	□□□□□ -1.74
SDL1	YIL167W	DUS1	P53759	423 aa	Known RBP	4.19	□□□□□ -1.74
SDL1	YIL167W	ERG5	P54781	538 aa		4.19	□□□□□ -1.74
SDL1	YIL167W	MET7	Q08645	548 aa		4.19	□□□□□ -1.74
SDL1	YIL167W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
SDL1	YIL167W	SET5	P38890	526 aa	Known RBP	4.18	□□□□□ -1.74
SDL1	YIL167W	OSW7	P43611	510 aa		4.18	□□□□□ -1.74
SDL1	YIL167W	ZDS1	P50111	915 aa	Known RBP	4.18	□□□□□ -1.74
SDL1	YIL167W	CTF4	Q01454	927 aa		4.18	□□□□□ -1.74
SDL1	YIL167W	KIN4	Q01919	800 aa		4.18	□□□□□ -1.74
SDL1	YIL167W	THI21	Q08975	551 aa		4.18	□□□□□ -1.74
SDL1	YIL167W	HAL9	Q12180	1030 aa		4.18	□□□□□ -1.74
SDL1	YIL167W	YTA7	P40340	1379 aa		4.17	□□□□□ -1.74
SDL1	YIL167W	RAD53	P22216	821 aa		4.17	□□□□□ -1.74
SDL1	YIL167W	NGG1	P32494	702 aa		4.17	□□□□□ -1.74
SDL1	YIL167W	ASI2	P53895	289 aa		4.17	□□□□□ -1.74
SDL1	YIL167W	LRS4	Q04087	347 aa	Known RBP	4.17	□□□□□ -1.74
SDL1	YIL167W	FPR4	Q06205	392 aa	Predicted RBP	4.17	□□□□□ -1.74
SDL1	YIL167W	YLR125W	Q12138	136 aa		4.17	□□□□□ -1.74
SDL1	YIL167W	YOR022C	Q12204	715 aa		4.17	□□□□□ -1.74
SDL1	YIL167W	YBR182C-A	Q8TGU6	64 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms