RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C YBL111CQ3E7Y5 667 aa9.29□□□□□ -0.92
SSL2YIL143C RPL8AP17076 256 aaKnown RBP9.29□□□□□ -0.92
SSL2YIL143C BAS1P22035 811 aa9.29□□□□□ -0.92
SSL2YIL143C UBP1P25037 809 aa9.29□□□□□ -0.92
SSL2YIL143C VPS35P34110 944 aa9.29□□□□□ -0.92
SSL2YIL143C BCH2P36122 765 aa9.29□□□□□ -0.92
SSL2YIL143C TIF4631P39935 952 aaKnown RBP9.29□□□□□ -0.92
SSL2YIL143C ATG1P53104 897 aa9.29□□□□□ -0.92
SSL2YIL143C YMR187CQ03236 431 aa9.29□□□□□ -0.92
SSL2YIL143C VPS16Q03308 798 aa9.29□□□□□ -0.92
SSL2YIL143C SUB2Q07478 446 aaKnown RBP9.29□□□□□ -0.92
SSL2YIL143C PLC1P32383 869 aa9.28□□□□□ -0.92
SSL2YIL143C RPS0AP32905 252 aaKnown RBP9.28□□□□□ -0.92
SSL2YIL143C BLI1P35727 113 aa9.28□□□□□ -0.92
SSL2YIL143C TIF5P38431 405 aaKnown RBP9.28□□□□□ -0.92
SSL2YIL143C HXT8P40886 569 aa9.28□□□□□ -0.92
SSL2YIL143C SET4P42948 560 aa9.28□□□□□ -0.92
SSL2YIL143C SPO19Q03029 223 aa9.28□□□□□ -0.92
SSL2YIL143C ALR1Q08269 859 aa9.28□□□□□ -0.92
SSL2YIL143C MED1Q12321 566 aa9.28□□□□□ -0.92
SSL2YIL143C SMY1P32364 656 aaKnown RBP9.28□□□□□ -0.92
SSL2YIL143C SDS3P40505 327 aa9.28□□□□□ -0.92
SSL2YIL143C INA22P40576 216 aa9.28□□□□□ -0.92
SSL2YIL143C UTP22P53254 1237 aaPredicted RBP9.28□□□□□ -0.92
SSL2YIL143C HPC2Q01448 625 aa9.28□□□□□ -0.92
SSL2YIL143C SYH1Q02875 849 aaKnown RBP9.28□□□□□ -0.92
SSL2YIL143C YLR297WQ05899 129 aa9.28□□□□□ -0.92
SSL2YIL143C SRM1P21827 482 aa9.27□□□□□ -0.93
SSL2YIL143C SPT16P32558 1035 aaKnown RBP9.27□□□□□ -0.93
SSL2YIL143C YME1P32795 747 aa9.27□□□□□ -0.93
SSL2YIL143C HIS2P38635 335 aa9.27□□□□□ -0.93
SSL2YIL143C VPS45P38932 577 aa9.27□□□□□ -0.93
SSL2YIL143C ULP2P40537 1034 aaPredicted RBP9.27□□□□□ -0.93
SSL2YIL143C TLG1Q03322 224 aa9.27□□□□□ -0.93
SSL2YIL143C OSW1Q08692 278 aa9.27□□□□□ -0.93
SSL2YIL143C GNT1Q12096 491 aa9.27□□□□□ -0.93
SSL2YIL143C IME1P21190 360 aa9.27□□□□□ -0.93
SSL2YIL143C PRE8P23639 250 aa9.27□□□□□ -0.93
SSL2YIL143C MVD1P32377 396 aaKnown RBP9.27□□□□□ -0.93
SSL2YIL143C STE13P33894 931 aa9.27□□□□□ -0.93
SSL2YIL143C FZO1P38297 855 aa9.27□□□□□ -0.93
SSL2YIL143C RRT2P38332 387 aa9.27□□□□□ -0.93
SSL2YIL143C YML082WQ04533 649 aaKnown RBP9.27□□□□□ -0.93
SSL2YIL143C SAM2P19358 384 aaKnown RBP9.26□□□□□ -0.93
SSL2YIL143C MRF1P30775 413 aaPredicted RBP9.26□□□□□ -0.93
SSL2YIL143C CBF5P33322 483 aaKnown RBP RIP-Chip data9.26□□□□□ -0.93not detected
SSL2YIL143C YEL1P34225 687 aa9.26□□□□□ -0.93
SSL2YIL143C SAK1P38990 1142 aa9.26□□□□□ -0.93
SSL2YIL143C ROG3P43602 733 aa9.26□□□□□ -0.93
SSL2YIL143C VPS53P47061 822 aa9.26□□□□□ -0.93
SSL2YIL143C MFM1Q02783 413 aa9.26□□□□□ -0.93
SSL2YIL143C YML119WQ03208 357 aa9.26□□□□□ -0.93
SSL2YIL143C SPT2P06843 333 aaPredicted RBP9.26□□□□□ -0.93
SSL2YIL143C BUD14P27637 709 aa9.26□□□□□ -0.93
SSL2YIL143C NIP1P32497 812 aaKnown RBP9.26□□□□□ -0.93
SSL2YIL143C NDT80P38830 627 aa9.26□□□□□ -0.93
SSL2YIL143C NUP82P40368 713 aa9.26□□□□□ -0.93
SSL2YIL143C UBP6P43593 499 aaKnown RBP9.26□□□□□ -0.93
SSL2YIL143C TY4A-JP47023 414 aa9.26□□□□□ -0.93
SSL2YIL143C MDM38Q08179 573 aa9.26□□□□□ -0.93
SSL2YIL143C MRPS28P21771 286 aa9.25□□□□□ -0.93
SSL2YIL143C SRO9P25567 434 aaKnown RBP9.25□□□□□ -0.93
SSL2YIL143C PTC3P34221 468 aaKnown RBP9.25□□□□□ -0.93
SSL2YIL143C SUL1P38359 859 aa9.25□□□□□ -0.93
SSL2YIL143C UBP9P39967 754 aa9.25□□□□□ -0.93
SSL2YIL143C ZIP2P53061 704 aa9.25□□□□□ -0.93
SSL2YIL143C YNL144CP53907 740 aa9.25□□□□□ -0.93
SSL2YIL143C UBP3Q01477 912 aaKnown RBP RIP-Chip data9.25□□□□□ -0.93not detected
SSL2YIL143C CUS1Q02554 436 aaPredicted RBP9.25□□□□□ -0.93
SSL2YIL143C GCD2P12754 651 aaPredicted RBP9.25□□□□□ -0.93
SSL2YIL143C RPS7AP26786 190 aaKnown RBP9.25□□□□□ -0.93
SSL2YIL143C ZUO1P32527 433 aaKnown RBP9.25□□□□□ -0.93
SSL2YIL143C REV7P38927 245 aa9.25□□□□□ -0.93
SSL2YIL143C ERP6P53198 216 aa9.25□□□□□ -0.93
SSL2YIL143C YPL277CQ08989 487 aa9.25□□□□□ -0.93
SSL2YIL143C CLN3P13365 580 aa9.24□□□□□ -0.93
SSL2YIL143C RRN6P32786 894 aa9.24□□□□□ -0.93
SSL2YIL143C TPS3P38426 1054 aaKnown RBP9.24□□□□□ -0.93
SSL2YIL143C NAB3P38996 802 aaKnown RBP RIP-Chip data9.24□□□□□ -0.93not detected
SSL2YIL143C BET4Q00618 327 aa9.24□□□□□ -0.93
SSL2YIL143C AAD16Q02895 342 aa9.24□□□□□ -0.93
SSL2YIL143C TMA64Q04600 565 aaKnown RBP9.24□□□□□ -0.93
SSL2YIL143C FKS1P38631 1876 aaKnown RBP9.24□□□□□ -0.93
SSL2YIL143C SWI6P09959 803 aa9.24□□□□□ -0.93
SSL2YIL143C SPO16P17122 198 aa9.24□□□□□ -0.93
SSL2YIL143C RET1P22276 1149 aaKnown RBP9.24□□□□□ -0.93
SSL2YIL143C CLB4P24871 460 aa9.24□□□□□ -0.93
SSL2YIL143C SSE1P32589 693 aaKnown RBP9.24□□□□□ -0.93
SSL2YIL143C TRZ1P36159 838 aaPredicted RBP9.24□□□□□ -0.93
SSL2YIL143C EXO5P38289 585 aa9.24□□□□□ -0.93
SSL2YIL143C PSY2P40164 858 aa9.24□□□□□ -0.93
SSL2YIL143C BRE2P43132 505 aa9.24□□□□□ -0.93
SSL2YIL143C SIT4P20604 311 aa9.23□□□□□ -0.93
SSL2YIL143C TFC4P33339 1025 aa9.23□□□□□ -0.93
SSL2YIL143C RPC37P36121 282 aa9.23□□□□□ -0.93
SSL2YIL143C END3P39013 349 aa9.23□□□□□ -0.93
SSL2YIL143C NNF2P53253 936 aa9.23□□□□□ -0.93
SSL2YIL143C MDR1P53258 950 aa9.23□□□□□ -0.93
SSL2YIL143C SHE9Q04172 456 aa9.23□□□□□ -0.93
SSL2YIL143C SKG3Q06315 1026 aa9.23□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms