RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W CDC53Q12018 815 aaKnown RBP12.14□□□□□ -0.47
SIM1YIL123W NCR1Q12200 1170 aa12.14□□□□□ -0.47
SIM1YIL123W IXR1P33417 597 aa12.13□□□□□ -0.47
SIM1YIL123W YEL025CP39991 1188 aa12.13□□□□□ -0.47
SIM1YIL123W POB3Q04636 552 aaKnown RBP12.13□□□□□ -0.47
SIM1YIL123W NOC3Q07896 663 aaPredicted RBP12.13□□□□□ -0.47
SIM1YIL123W SIL1Q08199 421 aa12.13□□□□□ -0.47
SIM1YIL123W OSH2Q12451 1283 aa12.13□□□□□ -0.47
SIM1YIL123W TRP2P00899 507 aaKnown RBP12.12□□□□□ -0.47
SIM1YIL123W TFC4P33339 1025 aa12.12□□□□□ -0.47
SIM1YIL123W CCT4P39078 528 aaKnown RBP12.12□□□□□ -0.47
SIM1YIL123W AVT1P47082 602 aa12.12□□□□□ -0.47
SIM1YIL123W YGR021WP53212 290 aa12.12□□□□□ -0.47
SIM1YIL123W MDR1P53258 950 aa12.12□□□□□ -0.47
SIM1YIL123W DUS4Q06063 367 aa12.12□□□□□ -0.47
SIM1YIL123W DED1P06634 604 aaKnown RBP12.11□□□□□ -0.47
SIM1YIL123W HVG1P0CE11 249 aa12.11□□□□□ -0.47
SIM1YIL123W RPO26P20435 155 aa12.11□□□□□ -0.47
SIM1YIL123W MUD1P32605 298 aaKnown RBP12.11□□□□□ -0.47
SIM1YIL123W KIC1P38692 1080 aa12.11□□□□□ -0.47
SIM1YIL123W UBP3Q01477 912 aaKnown RBP RIP-Chip data12.11□□□□□ -0.47not detected
SIM1YIL123W YMR321CQ04898 105 aa12.11□□□□□ -0.47
SIM1YIL123W COQ9Q05779 260 aa12.11□□□□□ -0.47
SIM1YIL123W SSD1P24276 1250 aaKnown RBP RIP-Chip data12.11□□□□□ -0.47 RIP-Chip
SIM1YIL123W KIP1P28742 1111 aa12.11□□□□□ -0.47
SIM1YIL123W RAD54P32863 898 aa12.11□□□□□ -0.47
SIM1YIL123W BSD2P38356 321 aa12.11□□□□□ -0.47
SIM1YIL123W RTT102P53330 157 aa12.11□□□□□ -0.47
SIM1YIL123W SYH1Q02875 849 aaKnown RBP12.11□□□□□ -0.47
SIM1YIL123W ATG23Q06671 453 aa12.11□□□□□ -0.47
SIM1YIL123W YDL206WQ12424 762 aa12.11□□□□□ -0.47
SIM1YIL123W ERG11P10614 530 aa12.1□□□□□ -0.47
SIM1YIL123W PAP1P29468 568 aaKnown RBP12.1□□□□□ -0.47
SIM1YIL123W CNS1P33313 385 aa12.1□□□□□ -0.47
SIM1YIL123W ENV11P53246 860 aa12.1□□□□□ -0.47
SIM1YIL123W VTC3Q02725 835 aa12.1□□□□□ -0.47
SIM1YIL123W JIP4Q03361 876 aa12.1□□□□□ -0.47
SIM1YIL123W IES4Q08561 116 aa12.1□□□□□ -0.47
SIM1YIL123W TY3A-GQ12173 290 aa12.1□□□□□ -0.47
SIM1YIL123W TY3A-IQ99219 290 aa12.1□□□□□ -0.47
SIM1YIL123W VMA1P17255 1071 aaKnown RBP12.09□□□□□ -0.47
SIM1YIL123W SSA4P22202 642 aaKnown RBP12.09□□□□□ -0.47
SIM1YIL123W SGM1P47166 707 aa12.09□□□□□ -0.47
SIM1YIL123W YMR114CQ04471 368 aaKnown RBP12.09□□□□□ -0.47
SIM1YIL123W UTP14Q04500 899 aaKnown RBP12.09□□□□□ -0.47
SIM1YIL123W YML082WQ04533 649 aaKnown RBP12.09□□□□□ -0.47
SIM1YIL123W SLX4Q12098 748 aa12.09□□□□□ -0.47
SIM1YIL123W SNF1P06782 633 aaKnown RBP12.08□□□□□ -0.48
SIM1YIL123W RME1P32338 300 aaKnown RBP12.08□□□□□ -0.48
SIM1YIL123W NPP2P39997 493 aa12.08□□□□□ -0.48
SIM1YIL123W KAP114P53067 1004 aa12.08□□□□□ -0.48
SIM1YIL123W GPI13Q07830 1017 aa12.08□□□□□ -0.48
SIM1YIL123W OSW2Q12202 724 aa12.08□□□□□ -0.48
SIM1YIL123W TRM11Q12463 433 aa12.08□□□□□ -0.48
SIM1YIL123W RMP1Q12530 201 aa12.08□□□□□ -0.48
SIM1YIL123W GFA1P14742 717 aaKnown RBP12.07□□□□□ -0.48
SIM1YIL123W SEC21P32074 935 aaKnown RBP12.07□□□□□ -0.48
SIM1YIL123W EAF5P39995 279 aa12.07□□□□□ -0.48
SIM1YIL123W MAD1P40957 749 aa12.07□□□□□ -0.48
SIM1YIL123W VPS70P47161 811 aa12.07□□□□□ -0.48
SIM1YIL123W RPS7BP48164 190 aaKnown RBP12.07□□□□□ -0.48
SIM1YIL123W SHE10P53075 577 aa12.07□□□□□ -0.48
SIM1YIL123W CWC22P53333 577 aaKnown RBP12.07□□□□□ -0.48
SIM1YIL123W CST9Q06032 482 aa12.07□□□□□ -0.48
SIM1YIL123W MSC6Q08818 692 aaKnown RBP12.07□□□□□ -0.48
SIM1YIL123W YUR1P26725 428 aa12.06□□□□□ -0.48
SIM1YIL123W EFT1P32324 842 aaKnown RBP12.06□□□□□ -0.48
SIM1YIL123W ASH1P34233 588 aa12.06□□□□□ -0.48
SIM1YIL123W BLI1P35727 113 aa12.06□□□□□ -0.48
SIM1YIL123W TRZ1P36159 838 aaPredicted RBP12.06□□□□□ -0.48
SIM1YIL123W TDA3P38758 523 aa12.06□□□□□ -0.48
SIM1YIL123W CIN4P39110 191 aa12.06□□□□□ -0.48
SIM1YIL123W SPR3P41901 512 aa12.06□□□□□ -0.48
SIM1YIL123W HSH155P49955 971 aaKnown RBP12.06□□□□□ -0.48
SIM1YIL123W YNL146WP53906 100 aa12.06□□□□□ -0.48
SIM1YIL123W NOP6Q07623 225 aaKnown RBP12.06□□□□□ -0.48
SIM1YIL123W IRE1P32361 1115 aa12.05□□□□□ -0.48
SIM1YIL123W PIN4P34217 668 aaKnown RBP RIP-Chip data12.05□□□□□ -0.48not detected
SIM1YIL123W YKL050CP35736 922 aa12.05□□□□□ -0.48
SIM1YIL123W BCH2P36122 765 aa12.05□□□□□ -0.48
SIM1YIL123W RPA49Q01080 415 aaPredicted RBP12.05□□□□□ -0.48
SIM1YIL123W VTI1Q04338 217 aa12.05□□□□□ -0.48
SIM1YIL123W YMR018WQ04364 514 aa12.05□□□□□ -0.48
SIM1YIL123W NUR1Q12066 484 aa12.05□□□□□ -0.48
SIM1YIL123W YLL058WQ12198 575 aa12.05□□□□□ -0.48
SIM1YIL123W CDC33P07260 213 aaKnown RBP12.04□□□□□ -0.48
SIM1YIL123W DPH2P32461 534 aa12.04□□□□□ -0.48
SIM1YIL123W GCG1P32656 232 aaKnown RBP12.04□□□□□ -0.48
SIM1YIL123W NFU1P32860 256 aa12.04□□□□□ -0.48
SIM1YIL123W RGT1P32862 1170 aa12.04□□□□□ -0.48
SIM1YIL123W APE3P37302 537 aaKnown RBP12.04□□□□□ -0.48
SIM1YIL123W RCK2P38623 610 aa12.04□□□□□ -0.48
SIM1YIL123W YKL068W-AQ3E826 78 aa12.04□□□□□ -0.48
SIM1YIL123W KIN82P25341 720 aa12.03□□□□□ -0.48
SIM1YIL123W EXO5P38289 585 aa12.03□□□□□ -0.48
SIM1YIL123W PSY2P40164 858 aa12.03□□□□□ -0.48
SIM1YIL123W ORC5P50874 479 aa12.03□□□□□ -0.48
SIM1YIL123W CUL3P53202 744 aa12.03□□□□□ -0.48
SIM1YIL123W DIG1Q03063 452 aaKnown RBP12.03□□□□□ -0.48
SIM1YIL123W CDC11P32458 415 aa12.03□□□□□ -0.48
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms