RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W YRF1-1P0CX20 1796 aa2.56□□□□□ -2
TRA1YHR099W YRF1-5P0CX21 1796 aa2.56□□□□□ -2
TRA1YHR099W YRF1-8P0CX22 1796 aa2.56□□□□□ -2
TRA1YHR099W RAV1P47104 1357 aa2.56□□□□□ -2
TRA1YHR099W CBS2P14905 389 aa2.55□□□□□ -2
TRA1YHR099W IME2P32581 645 aa2.55□□□□□ -2
TRA1YHR099W RPT5P33297 434 aaKnown RBP2.55□□□□□ -2
TRA1YHR099W GLG1P36143 616 aa2.55□□□□□ -2
TRA1YHR099W AFG3P39925 761 aa2.55□□□□□ -2
TRA1YHR099W ECM10P39987 644 aa2.55□□□□□ -2
TRA1YHR099W MIC19P43594 170 aa2.55□□□□□ -2
TRA1YHR099W YFR018CP43599 363 aa2.55□□□□□ -2
TRA1YHR099W YSH1Q06224 779 aaPredicted RBP2.55□□□□□ -2
TRA1YHR099W YKR015CP36111 568 aa2.55□□□□□ -2
TRA1YHR099W PFS1P38872 237 aa2.55□□□□□ -2
TRA1YHR099W GID8P40208 455 aa2.55□□□□□ -2
TRA1YHR099W VTC4P47075 721 aa2.55□□□□□ -2
TRA1YHR099W NQM1P53228 333 aaPredicted RBP2.55□□□□□ -2
TRA1YHR099W IDP3P53982 420 aaKnown RBP2.55□□□□□ -2
TRA1YHR099W DAD3P69850 94 aa2.55□□□□□ -2
TRA1YHR099W YDR514CQ04408 483 aa2.55□□□□□ -2
TRA1YHR099W RAD61Q99359 647 aa2.55□□□□□ -2
TRA1YHR099W GCD2P12754 651 aaPredicted RBP2.55□□□□□ -2
TRA1YHR099W RAM2P29703 316 aa2.55□□□□□ -2
TRA1YHR099W MRP8P35719 219 aa2.55□□□□□ -2
TRA1YHR099W VID27P40157 782 aa2.55□□□□□ -2
TRA1YHR099W TIR3P40552 269 aa2.55□□□□□ -2
TRA1YHR099W PEX21P50091 288 aa2.55□□□□□ -2
TRA1YHR099W ALT2P52892 507 aa2.55□□□□□ -2
TRA1YHR099W KIP3P53086 805 aaKnown RBP2.55□□□□□ -2
TRA1YHR099W PEX29Q03370 554 aa2.55□□□□□ -2
TRA1YHR099W CIR2Q08822 631 aa2.55□□□□□ -2
TRA1YHR099W BNR1P40450 1375 aa2.55□□□□□ -2
TRA1YHR099W PDR12Q02785 1511 aa2.55□□□□□ -2
TRA1YHR099W RVS161P25343 265 aaKnown RBP2.55□□□□□ -2
TRA1YHR099W SLM1P40485 686 aa2.55□□□□□ -2
TRA1YHR099W PSK2Q08217 1101 aa2.55□□□□□ -2
TRA1YHR099W CMD1P06787 147 aaKnown RBP2.55□□□□□ -2
TRA1YHR099W GUK1P15454 187 aaKnown RBP2.55□□□□□ -2
TRA1YHR099W TUP1P16649 713 aa2.55□□□□□ -2
TRA1YHR099W NOP4P37838 685 aaKnown RBP2.55□□□□□ -2
TRA1YHR099W AKL1P38080 1108 aaKnown RBP2.55□□□□□ -2
TRA1YHR099W TIF4631P39935 952 aaKnown RBP2.55□□□□□ -2
TRA1YHR099W MMS1Q06211 1407 aa2.55□□□□□ -2
TRA1YHR099W RAD3P06839 778 aa2.55□□□□□ -2
TRA1YHR099W NCP1P16603 691 aaKnown RBP2.55□□□□□ -2
TRA1YHR099W SPO16P17122 198 aa2.55□□□□□ -2
TRA1YHR099W CLB2P24869 491 aa2.55□□□□□ -2
TRA1YHR099W RRP3P38712 501 aaKnown RBP2.55□□□□□ -2
TRA1YHR099W VPS8P39702 1274 aa2.55□□□□□ -2
TRA1YHR099W MNT3P40549 630 aa2.55□□□□□ -2
TRA1YHR099W OPT1P40897 799 aa2.55□□□□□ -2
TRA1YHR099W NUP84P52891 726 aa2.55□□□□□ -2
TRA1YHR099W USA1Q03714 838 aa2.55□□□□□ -2
TRA1YHR099W PPN1Q04119 674 aa2.55□□□□□ -2
TRA1YHR099W CDC123Q05791 360 aa2.55□□□□□ -2
TRA1YHR099W TSR3Q12094 313 aaKnown RBP2.55□□□□□ -2
TRA1YHR099W AUS1Q08409 1394 aa2.55□□□□□ -2
TRA1YHR099W KSS1P14681 368 aa2.55□□□□□ -2
TRA1YHR099W ESL1P40456 1118 aa2.55□□□□□ -2
TRA1YHR099W DLD2P46681 530 aaKnown RBP2.55□□□□□ -2
TRA1YHR099W GNP1P48813 663 aa2.55□□□□□ -2
TRA1YHR099W PSF3Q12146 194 aa2.55□□□□□ -2
TRA1YHR099W MNL2Q12205 849 aa2.55□□□□□ -2
TRA1YHR099W SKM1Q12469 655 aa2.55□□□□□ -2
TRA1YHR099W MAS2P11914 482 aa2.55□□□□□ -2
TRA1YHR099W ICL1P28240 557 aaPredicted RBP2.55□□□□□ -2
TRA1YHR099W HBS1P32769 611 aaKnown RBP2.55□□□□□ -2
TRA1YHR099W CBR1P38626 284 aaKnown RBP2.55□□□□□ -2
TRA1YHR099W RIM4P38741 713 aa2.55□□□□□ -2
TRA1YHR099W YHB1P39676 399 aaKnown RBP2.55□□□□□ -2
TRA1YHR099W PRM2P40534 656 aa2.55□□□□□ -2
TRA1YHR099W YRB1P41920 201 aaKnown RBP2.55□□□□□ -2
TRA1YHR099W CWC24P53769 259 aa2.55□□□□□ -2
TRA1YHR099W GSF2Q04697 403 aaKnown RBP2.55□□□□□ -2
TRA1YHR099W APC5Q08683 685 aa2.55□□□□□ -2
TRA1YHR099W PYC2P32327 1180 aaKnown RBP2.55□□□□□ -2
TRA1YHR099W RPC82P32349 654 aa2.55□□□□□ -2
TRA1YHR099W XRS2P33301 854 aa2.55□□□□□ -2
TRA1YHR099W SLA2P33338 968 aa2.55□□□□□ -2
TRA1YHR099W PTH2P34222 208 aa2.55□□□□□ -2
TRA1YHR099W LNP1P38878 278 aa2.55□□□□□ -2
TRA1YHR099W YHR210CP38893 341 aa2.55□□□□□ -2
TRA1YHR099W CCT4P39078 528 aaKnown RBP2.55□□□□□ -2
TRA1YHR099W HOS2P53096 452 aaPredicted RBP2.55□□□□□ -2
TRA1YHR099W EFM6P53970 246 aa2.55□□□□□ -2
TRA1YHR099W MEH1Q02205 184 aa2.55□□□□□ -2
TRA1YHR099W YAP6Q03935 383 aa2.55□□□□□ -2
TRA1YHR099W SNF1P06782 633 aaKnown RBP2.54□□□□□ -2
TRA1YHR099W FUI1P38196 639 aa2.54□□□□□ -2
TRA1YHR099W ATG7P38862 630 aa2.54□□□□□ -2
TRA1YHR099W ISC1P40015 477 aaKnown RBP2.54□□□□□ -2
TRA1YHR099W YRB2P40517 327 aa2.54□□□□□ -2
TRA1YHR099W GVP36P40531 326 aaKnown RBP2.54□□□□□ -2
TRA1YHR099W APT1P49435 187 aaKnown RBP2.54□□□□□ -2
TRA1YHR099W ZDS1P50111 915 aaKnown RBP2.54□□□□□ -2
TRA1YHR099W PEX30Q06169 523 aa2.54□□□□□ -2
TRA1YHR099W YML002WP0CF17 737 aa2.54□□□□□ -2
TRA1YHR099W DAL7P21826 554 aa2.54□□□□□ -2
TRA1YHR099W BCH2P36122 765 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 95.1 ms