RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C LSB1P53281 241 aa3.26□□□□□ -1.89
NMD2YHR077C SYH1Q02875 849 aaKnown RBP3.26□□□□□ -1.89
NMD2YHR077C YMR321CQ04898 105 aa3.26□□□□□ -1.89
NMD2YHR077C TDA5Q06417 326 aaKnown RBP3.26□□□□□ -1.89
NMD2YHR077C SLX4Q12098 748 aa3.26□□□□□ -1.89
NMD2YHR077C ERP3Q12403 225 aa3.26□□□□□ -1.89
NMD2YHR077C ERG12P07277 443 aa3.25□□□□□ -1.89
NMD2YHR077C PGM1P33401 570 aaKnown RBP3.25□□□□□ -1.89
NMD2YHR077C VPS35P34110 944 aa3.25□□□□□ -1.89
NMD2YHR077C MCR1P36060 302 aaKnown RBP3.25□□□□□ -1.89
NMD2YHR077C LAS1P36146 502 aaPredicted RBP3.25□□□□□ -1.89
NMD2YHR077C SCS3P53012 380 aa3.25□□□□□ -1.89
NMD2YHR077C KAP114P53067 1004 aa3.25□□□□□ -1.89
NMD2YHR077C YGR021WP53212 290 aa3.25□□□□□ -1.89
NMD2YHR077C FPK1P53739 893 aa3.25□□□□□ -1.89
NMD2YHR077C PHM6Q05637 104 aa3.25□□□□□ -1.89
NMD2YHR077C OSH2Q12451 1283 aa3.25□□□□□ -1.89
NMD2YHR077C ARG4P04076 463 aaPredicted RBP3.25□□□□□ -1.89
NMD2YHR077C RAD10P06838 210 aa3.25□□□□□ -1.89
NMD2YHR077C PHO8P11491 566 aa3.25□□□□□ -1.89
NMD2YHR077C PUF4P25339 888 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
NMD2YHR077C SMC1P32908 1225 aa3.25□□□□□ -1.89
NMD2YHR077C CNS1P33313 385 aa3.25□□□□□ -1.89
NMD2YHR077C PTC3P34221 468 aaKnown RBP3.25□□□□□ -1.89
NMD2YHR077C PNT1P38969 423 aa3.25□□□□□ -1.89
NMD2YHR077C YFL034WP43564 1073 aa3.25□□□□□ -1.89
NMD2YHR077C PHO86P46956 311 aa3.25□□□□□ -1.89
NMD2YHR077C AVT1P47082 602 aa3.25□□□□□ -1.89
NMD2YHR077C VID30P53076 958 aa3.25□□□□□ -1.89
NMD2YHR077C YMR187CQ03236 431 aa3.25□□□□□ -1.89
NMD2YHR077C YDR222WQ04925 415 aa3.25□□□□□ -1.89
NMD2YHR077C DON1Q05610 365 aa3.25□□□□□ -1.89
NMD2YHR077C YPR078CQ06813 372 aa3.25□□□□□ -1.89
NMD2YHR077C RLP24Q07915 199 aaKnown RBP3.25□□□□□ -1.89
NMD2YHR077C PGK1P00560 416 aaKnown RBP3.25□□□□□ -1.89
NMD2YHR077C RPS9BP05755 195 aaKnown RBP3.25□□□□□ -1.89
NMD2YHR077C KIP1P28742 1111 aa3.25□□□□□ -1.89
NMD2YHR077C SRB4P32569 687 aa3.25□□□□□ -1.89
NMD2YHR077C UTR4P32626 227 aa3.25□□□□□ -1.89
NMD2YHR077C LCP5P40079 357 aaPredicted RBP3.25□□□□□ -1.89
NMD2YHR077C HXT8P40886 569 aa3.25□□□□□ -1.89
NMD2YHR077C YMR114CQ04471 368 aaKnown RBP3.25□□□□□ -1.89
NMD2YHR077C SPO21Q12411 609 aa3.25□□□□□ -1.89
NMD2YHR077C PEP5P12868 1029 aa3.24□□□□□ -1.89
NMD2YHR077C IME1P21190 360 aa3.24□□□□□ -1.89
NMD2YHR077C RNR1P21524 888 aaKnown RBP3.24□□□□□ -1.89
NMD2YHR077C SEC20P28791 383 aa3.24□□□□□ -1.89
NMD2YHR077C VPS29P38759 282 aa3.24□□□□□ -1.89
NMD2YHR077C BRO1P48582 844 aa3.24□□□□□ -1.89
NMD2YHR077C USA1Q03714 838 aa3.24□□□□□ -1.89
NMD2YHR077C COQ9Q05779 260 aa3.24□□□□□ -1.89
NMD2YHR077C PUS5Q06244 254 aa3.24□□□□□ -1.89
NMD2YHR077C BI2P03873 423 aa3.24□□□□□ -1.89
NMD2YHR077C BI4P03879 638 aa3.24□□□□□ -1.89
NMD2YHR077C DED1P06634 604 aaKnown RBP3.24□□□□□ -1.89
NMD2YHR077C TCP1P12612 559 aaKnown RBP3.24□□□□□ -1.89
NMD2YHR077C GCD6P32501 712 aaKnown RBP3.24□□□□□ -1.89
NMD2YHR077C TMT1P32643 299 aa3.24□□□□□ -1.89
NMD2YHR077C BYE1P36106 594 aa3.24□□□□□ -1.89
NMD2YHR077C MED8P38304 223 aa3.24□□□□□ -1.89
NMD2YHR077C CWC22P53333 577 aaKnown RBP3.24□□□□□ -1.89
NMD2YHR077C TIM8P57744 87 aa3.24□□□□□ -1.89
NMD2YHR077C TAF9Q05027 157 aa3.24□□□□□ -1.89
NMD2YHR077C MPC54Q08550 464 aa3.24□□□□□ -1.89
NMD2YHR077C RKM4Q12504 494 aa3.24□□□□□ -1.89
NMD2YHR077C BI3Q9ZZW7 517 aa3.24□□□□□ -1.89
NMD2YHR077C KIN82P25341 720 aa3.24□□□□□ -1.89
NMD2YHR077C EXO5P38289 585 aa3.24□□□□□ -1.89
NMD2YHR077C END3P39013 349 aa3.24□□□□□ -1.89
NMD2YHR077C ECM1P39715 212 aa3.24□□□□□ -1.89
NMD2YHR077C SMX2P40204 77 aaKnown RBP3.24□□□□□ -1.89
NMD2YHR077C CLA4P48562 842 aa3.24□□□□□ -1.89
NMD2YHR077C YGR130CP53278 816 aa3.24□□□□□ -1.89
NMD2YHR077C NCS2P53923 493 aaPredicted RBP3.24□□□□□ -1.89
NMD2YHR077C UBR2Q07963 1872 aa3.24□□□□□ -1.89
NMD2YHR077C VPS13Q07878 3144 aa3.23□□□□□ -1.89
NMD2YHR077C RTG2P32608 588 aaKnown RBP3.23□□□□□ -1.89
NMD2YHR077C PEX2P32800 271 aa3.23□□□□□ -1.89
NMD2YHR077C YKL050CP35736 922 aa3.23□□□□□ -1.89
NMD2YHR077C JNM1P36224 373 aa3.23□□□□□ -1.89
NMD2YHR077C YJL045WP47052 634 aa3.23□□□□□ -1.89
NMD2YHR077C PEX29Q03370 554 aa3.23□□□□□ -1.89
NMD2YHR077C YLH47Q06493 454 aa3.23□□□□□ -1.89
NMD2YHR077C IES4Q08561 116 aa3.23□□□□□ -1.89
NMD2YHR077C SPT2P06843 333 aaPredicted RBP3.23□□□□□ -1.89
NMD2YHR077C HEM15P16622 393 aa3.23□□□□□ -1.89
NMD2YHR077C GPI10P30777 616 aa3.23□□□□□ -1.89
NMD2YHR077C NCL1P38205 684 aaKnown RBP3.23□□□□□ -1.89
NMD2YHR077C MAD1P40957 749 aa3.23□□□□□ -1.89
NMD2YHR077C YJR039WP47107 1121 aa3.23□□□□□ -1.89
NMD2YHR077C ORC5P50874 479 aa3.23□□□□□ -1.89
NMD2YHR077C SEN54Q02825 467 aaPredicted RBP3.23□□□□□ -1.89
NMD2YHR077C STE23Q06010 1027 aa3.23□□□□□ -1.89
NMD2YHR077C CRD1Q07560 283 aa3.23□□□□□ -1.89
NMD2YHR077C GIS3Q12418 502 aa3.23□□□□□ -1.89
NMD2YHR077C AI5_BETAQ9ZZX0 354 aa3.23□□□□□ -1.89
NMD2YHR077C YLR462WO13556 202 aa3.22□□□□□ -1.89
NMD2YHR077C COX4P04037 155 aa3.22□□□□□ -1.89
NMD2YHR077C RAD1P06777 1100 aa3.22□□□□□ -1.89
NMD2YHR077C CBF1P17106 351 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms