RNA–Protein interactions for RNA: YHR009C

TDA3, Transcript of Putative oxidoreductase involved in late endosome to Golgi transport, yeast

Gene TDA3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TDA3	YHR009C	NOG2	P53742	486 aa	Known RBP	5.04	□□□□□ -1.6
TDA3	YHR009C	NSG2	P53898	299 aa		5.04	□□□□□ -1.6
TDA3	YHR009C	ECM16	Q04217	1267 aa	Known RBP	5.04	□□□□□ -1.6
TDA3	YHR009C	VMS1	Q04311	632 aa	Known RBP	5.04	□□□□□ -1.6
TDA3	YHR009C	THI72	Q08579	599 aa		5.04	□□□□□ -1.6
TDA3	YHR009C	YEF3	P16521	1044 aa	Known RBP	5.03	□□□□□ -1.6
TDA3	YHR009C	TRX2	P22803	104 aa	Known RBP	5.03	□□□□□ -1.6
TDA3	YHR009C	YCL002C	P25565	263 aa		5.03	□□□□□ -1.6
TDA3	YHR009C	CCR4	P31384	837 aa	Known RBP	5.03	□□□□□ -1.6
TDA3	YHR009C	RPC82	P32349	654 aa		5.03	□□□□□ -1.6
TDA3	YHR009C	CCT5	P40413	562 aa	Known RBP	5.03	□□□□□ -1.6
TDA3	YHR009C	ALY2	P47029	1046 aa		5.03	□□□□□ -1.6
TDA3	YHR009C	HFM1	P51979	1187 aa		5.03	□□□□□ -1.6
TDA3	YHR009C	ATG16	Q03818	150 aa		5.03	□□□□□ -1.6
TDA3	YHR009C	LRS4	Q04087	347 aa	Known RBP	5.03	□□□□□ -1.6
TDA3	YHR009C	OSW2	Q12202	724 aa		5.03	□□□□□ -1.6
TDA3	YHR009C	AI3	P03877	415 aa		5.02	□□□□□ -1.61
TDA3	YHR009C	RFA1	P22336	621 aa	Known RBP	5.02	□□□□□ -1.61
TDA3	YHR009C	DAL3	P32459	195 aa		5.02	□□□□□ -1.61
TDA3	YHR009C	MDL2	P33311	773 aa		5.02	□□□□□ -1.61
TDA3	YHR009C	HSP78	P33416	811 aa		5.02	□□□□□ -1.61
TDA3	YHR009C	YAP1801	P38856	637 aa		5.02	□□□□□ -1.61
TDA3	YHR009C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	not detected
TDA3	YHR009C	DOT6	P40059	670 aa	Known RBP	5.02	□□□□□ -1.61
TDA3	YHR009C	RLP7	P40693	322 aa	Known RBP	5.02	□□□□□ -1.61
TDA3	YHR009C	SBE2	P42223	864 aa	Known RBP	5.02	□□□□□ -1.61
TDA3	YHR009C	YNR014W	P53719	212 aa		5.02	□□□□□ -1.61
TDA3	YHR009C	SDH1	Q00711	640 aa		5.02	□□□□□ -1.61
TDA3	YHR009C	MET14	Q02196	202 aa		5.02	□□□□□ -1.61
TDA3	YHR009C	RSC58	Q07979	502 aa		5.02	□□□□□ -1.61
TDA3	YHR009C	RSB1	Q08417	382 aa		5.02	□□□□□ -1.61
TDA3	YHR009C	SVS1	Q12254	260 aa		5.02	□□□□□ -1.61
TDA3	YHR009C	DID4	P36108	232 aa		5.01	□□□□□ -1.61
TDA3	YHR009C	TRZ1	P36159	838 aa	Predicted RBP	5.01	□□□□□ -1.61
TDA3	YHR009C	ECM21	P38167	1117 aa	Known RBP	5.01	□□□□□ -1.61
TDA3	YHR009C	HSL7	P38274	827 aa		5.01	□□□□□ -1.61
TDA3	YHR009C	YGR153W	P48238	217 aa		5.01	□□□□□ -1.61
TDA3	YHR009C	UBC9	P50623	157 aa	Predicted RBP	5.01	□□□□□ -1.61
TDA3	YHR009C	PIP2	P52960	996 aa		5.01	□□□□□ -1.61
TDA3	YHR009C	PBP1	P53297	722 aa	Known RBP	5.01	□□□□□ -1.61
TDA3	YHR009C	ECM9	Q02202	377 aa		5.01	□□□□□ -1.61
TDA3	YHR009C	XYL2	Q07993	356 aa		5.01	□□□□□ -1.61
TDA3	YHR009C	RMP1	Q12530	201 aa		5.01	□□□□□ -1.61
TDA3	YHR009C	YBR182C-A	Q8TGU6	64 aa		5.01	□□□□□ -1.61
TDA3	YHR009C	GAL1	P04385	528 aa		5	□□□□□ -1.61
TDA3	YHR009C	NOT3	P06102	836 aa	Known RBP	5	□□□□□ -1.61
TDA3	YHR009C	URA1	P28272	314 aa	Predicted RBP	5	□□□□□ -1.61
TDA3	YHR009C	WHI3	P34761	661 aa	Known RBP	5	□□□□□ -1.61
TDA3	YHR009C	TDA3	P38758	523 aa		5	□□□□□ -1.61
TDA3	YHR009C	IES5	P40060	125 aa		5	□□□□□ -1.61
TDA3	YHR009C	MMM1	P41800	426 aa		5	□□□□□ -1.61
TDA3	YHR009C	RET2	P43621	546 aa		5	□□□□□ -1.61
TDA3	YHR009C	YGR021W	P53212	290 aa		5	□□□□□ -1.61
TDA3	YHR009C	HDA1	P53973	706 aa		5	□□□□□ -1.61
TDA3	YHR009C	UBX4	P54730	416 aa		5	□□□□□ -1.61
TDA3	YHR009C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
TDA3	YHR009C	NBA1	Q08229	501 aa	Known RBP	5	□□□□□ -1.61
TDA3	YHR009C	PGI1	P12709	554 aa	Known RBP	4.99	□□□□□ -1.61
TDA3	YHR009C	ENA1	P13587	1091 aa		4.99	□□□□□ -1.61
TDA3	YHR009C	CYS3	P31373	394 aa	Known RBP	4.99	□□□□□ -1.61
TDA3	YHR009C	CEP3	P40969	608 aa		4.99	□□□□□ -1.61
TDA3	YHR009C	ENA2	Q01896	1091 aa		4.99	□□□□□ -1.61
TDA3	YHR009C	ENA5	Q12691	1091 aa		4.99	□□□□□ -1.61
TDA3	YHR009C	DIF1	O13577	133 aa		4.99	□□□□□ -1.61
TDA3	YHR009C	DPB3	P27344	201 aa		4.99	□□□□□ -1.61
TDA3	YHR009C	HEM12	P32347	362 aa	Predicted RBP	4.99	□□□□□ -1.61
TDA3	YHR009C	NIC96	P34077	839 aa		4.99	□□□□□ -1.61
TDA3	YHR009C	BIT2	P38346	545 aa		4.99	□□□□□ -1.61
TDA3	YHR009C	CIT3	P43635	486 aa		4.99	□□□□□ -1.61
TDA3	YHR009C	ARI1	P53111	347 aa	Known RBP	4.99	□□□□□ -1.61
TDA3	YHR009C	YDL121C	Q07541	149 aa		4.99	□□□□□ -1.61
TDA3	YHR009C	YOR059C	Q08448	450 aa	Known RBP	4.99	□□□□□ -1.61
TDA3	YHR009C	PTP2	P29461	750 aa		4.98	□□□□□ -1.61
TDA3	YHR009C	NAM7	P30771	971 aa	Known RBP	4.98	□□□□□ -1.61
TDA3	YHR009C	STE13	P33894	931 aa		4.98	□□□□□ -1.61
TDA3	YHR009C	SAP190	P36123	1033 aa		4.98	□□□□□ -1.61
TDA3	YHR009C	HXT6	P39003	570 aa	Known RBP	4.98	□□□□□ -1.61
TDA3	YHR009C	HXT7	P39004	570 aa		4.98	□□□□□ -1.61
TDA3	YHR009C	SHR5	P41912	237 aa		4.98	□□□□□ -1.61
TDA3	YHR009C	PHM6	Q05637	104 aa		4.98	□□□□□ -1.61
TDA3	YHR009C	RPS9A	O13516	197 aa	Known RBP	4.97	□□□□□ -1.61
TDA3	YHR009C	YKR051W	P36142	418 aa		4.97	□□□□□ -1.61
TDA3	YHR009C	SET5	P38890	526 aa	Known RBP	4.97	□□□□□ -1.61
TDA3	YHR009C	AKR1	P39010	764 aa		4.97	□□□□□ -1.61
TDA3	YHR009C	PEX7	P39108	375 aa		4.97	□□□□□ -1.61
TDA3	YHR009C	SPC105	P53148	917 aa		4.97	□□□□□ -1.61
TDA3	YHR009C	NPY1	P53164	384 aa		4.97	□□□□□ -1.61
TDA3	YHR009C	RCM1	P53972	490 aa		4.97	□□□□□ -1.61
TDA3	YHR009C	YKR011C	Q02209	353 aa		4.97	□□□□□ -1.61
TDA3	YHR009C	CRR1	Q05790	422 aa		4.97	□□□□□ -1.61
TDA3	YHR009C	RRP6	Q12149	733 aa	Known RBP	4.97	□□□□□ -1.61
TDA3	YHR009C	RPS21A	P0C0V8	87 aa	Known RBP	4.96	□□□□□ -1.62
TDA3	YHR009C	KCC4	P25389	1037 aa		4.96	□□□□□ -1.62
TDA3	YHR009C	ABZ1	P37254	787 aa	Predicted RBP	4.96	□□□□□ -1.62
TDA3	YHR009C	RFC5	P38251	354 aa		4.96	□□□□□ -1.62
TDA3	YHR009C	MCX1	P38323	520 aa	Predicted RBP	4.96	□□□□□ -1.62
TDA3	YHR009C	RRP8	P38961	392 aa	Known RBP	4.96	□□□□□ -1.62
TDA3	YHR009C	OYE3	P41816	400 aa	Predicted RBP	4.96	□□□□□ -1.62
TDA3	YHR009C	RSC8	P43609	557 aa	Known RBP	4.96	□□□□□ -1.62
TDA3	YHR009C	PRY1	P47032	299 aa		4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms