RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C ESL2P36168 1195 aa4.05□□□□□ -1.76
PDX1YGR193C YAP1801P38856 637 aa4.05□□□□□ -1.76
PDX1YGR193C FAA3P39002 694 aa4.05□□□□□ -1.76
PDX1YGR193C SNF7P39929 240 aaKnown RBP4.05□□□□□ -1.76
PDX1YGR193C YEN1P40028 759 aa4.05□□□□□ -1.76
PDX1YGR193C IRR1P40541 1150 aa4.05□□□□□ -1.76
PDX1YGR193C SEC26P41810 973 aaKnown RBP4.05□□□□□ -1.76
PDX1YGR193C YFL054CP43549 646 aa4.05□□□□□ -1.76
PDX1YGR193C GYP7P48365 746 aa4.05□□□□□ -1.76
PDX1YGR193C PEX8P53248 589 aa4.05□□□□□ -1.76
PDX1YGR193C TNA1P53322 534 aa4.05□□□□□ -1.76
PDX1YGR193C HOL1P53389 586 aa4.05□□□□□ -1.76
PDX1YGR193C RNH1Q04740 348 aa4.05□□□□□ -1.76
PDX1YGR193C EST2Q06163 884 aa4.05□□□□□ -1.76
PDX1YGR193C YOR352WQ08816 343 aa4.05□□□□□ -1.76
PDX1YGR193C SEC3P33332 1336 aaKnown RBP4.04□□□□□ -1.76
PDX1YGR193C ATP4P05626 244 aa4.04□□□□□ -1.76
PDX1YGR193C MPH2P0CD99 609 aa4.04□□□□□ -1.76
PDX1YGR193C RAD4P14736 754 aa4.04□□□□□ -1.76
PDX1YGR193C MER1P16523 270 aa4.04□□□□□ -1.76
PDX1YGR193C ATE1P16639 503 aa4.04□□□□□ -1.76
PDX1YGR193C SRM1P21827 482 aa4.04□□□□□ -1.76
PDX1YGR193C URA1P28272 314 aaPredicted RBP4.04□□□□□ -1.76
PDX1YGR193C RPC82P32349 654 aa4.04□□□□□ -1.76
PDX1YGR193C GCD6P32501 712 aaKnown RBP4.04□□□□□ -1.76
PDX1YGR193C YKL050CP35736 922 aa4.04□□□□□ -1.76
PDX1YGR193C ALG3P38179 458 aa4.04□□□□□ -1.76
PDX1YGR193C CCZ1P38273 704 aa4.04□□□□□ -1.76
PDX1YGR193C VAC8P39968 578 aa4.04□□□□□ -1.76
PDX1YGR193C PIC2P40035 300 aa4.04□□□□□ -1.76
PDX1YGR193C IES5P40060 125 aa4.04□□□□□ -1.76
PDX1YGR193C SHE10P53075 577 aa4.04□□□□□ -1.76
PDX1YGR193C SLI1P53304 468 aa4.04□□□□□ -1.76
PDX1YGR193C HOS3Q02959 697 aaKnown RBP4.04□□□□□ -1.76
PDX1YGR193C ADI1Q03677 179 aa4.04□□□□□ -1.76
PDX1YGR193C TAP42Q04372 366 aa4.04□□□□□ -1.76
PDX1YGR193C DBP9Q06218 594 aaKnown RBP4.04□□□□□ -1.76
PDX1YGR193C PSR1Q07800 427 aa4.04□□□□□ -1.76
PDX1YGR193C YOR389WQ08912 624 aa4.04□□□□□ -1.76
PDX1YGR193C PUS9Q12069 462 aa4.04□□□□□ -1.76
PDX1YGR193C LSP1Q12230 341 aaKnown RBP4.04□□□□□ -1.76
PDX1YGR193C PTC5Q12511 572 aa4.04□□□□□ -1.76
PDX1YGR193C GAL10P04397 699 aa4.03□□□□□ -1.76
PDX1YGR193C DED1P06634 604 aaKnown RBP4.03□□□□□ -1.76
PDX1YGR193C YEF3P16521 1044 aaKnown RBP4.03□□□□□ -1.76
PDX1YGR193C RPB4P20433 221 aaPredicted RBP4.03□□□□□ -1.76
PDX1YGR193C MRPL25P23369 157 aa4.03□□□□□ -1.76
PDX1YGR193C CDC60P26637 1090 aaKnown RBP4.03□□□□□ -1.76
PDX1YGR193C EFB1P32471 206 aaKnown RBP4.03□□□□□ -1.76
PDX1YGR193C SEC8P32855 1065 aa4.03□□□□□ -1.76
PDX1YGR193C KDX1P36005 433 aa4.03□□□□□ -1.76
PDX1YGR193C CCL1P37366 393 aa4.03□□□□□ -1.76
PDX1YGR193C RRF1P38771 230 aa4.03□□□□□ -1.76
PDX1YGR193C PIK1P39104 1066 aa4.03□□□□□ -1.76
PDX1YGR193C RTT105P40063 208 aa4.03□□□□□ -1.76
PDX1YGR193C MAM1P40065 302 aa4.03□□□□□ -1.76
PDX1YGR193C SET2P46995 733 aaKnown RBP4.03□□□□□ -1.76
PDX1YGR193C ATP22P50273 684 aaPredicted RBP4.03□□□□□ -1.76
PDX1YGR193C BTN2P53286 410 aa4.03□□□□□ -1.76
PDX1YGR193C ATG38Q05789 226 aaKnown RBP4.03□□□□□ -1.76
PDX1YGR193C TMA10Q06177 86 aa4.03□□□□□ -1.76
PDX1YGR193C ARV1Q06541 321 aa4.03□□□□□ -1.76
PDX1YGR193C TSR2Q06672 205 aaKnown RBP4.03□□□□□ -1.76
PDX1YGR193C SLX4Q12098 748 aa4.03□□□□□ -1.76
PDX1YGR193C NFI1Q12216 726 aa4.03□□□□□ -1.76
PDX1YGR193C RIB2Q12362 591 aaKnown RBP4.03□□□□□ -1.76
PDX1YGR193C APC2Q12440 853 aa4.03□□□□□ -1.76
PDX1YGR193C TUF1P02992 437 aaKnown RBP4.02□□□□□ -1.77
PDX1YGR193C MET6P05694 767 aaKnown RBP4.02□□□□□ -1.77
PDX1YGR193C THR4P16120 514 aaKnown RBP4.02□□□□□ -1.77
PDX1YGR193C HNM1P19807 563 aa4.02□□□□□ -1.77
PDX1YGR193C PUF4P25339 888 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
PDX1YGR193C CDC20P26309 610 aa4.02□□□□□ -1.77
PDX1YGR193C TRM2P33753 639 aa4.02□□□□□ -1.77
PDX1YGR193C PEX6P33760 1030 aa4.02□□□□□ -1.77
PDX1YGR193C LST4P34239 828 aa4.02□□□□□ -1.77
PDX1YGR193C SKI2P35207 1287 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
PDX1YGR193C PBP2P38151 413 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
PDX1YGR193C OTU2P38747 307 aaKnown RBP4.02□□□□□ -1.77
PDX1YGR193C ARB1P40024 610 aaKnown RBP4.02□□□□□ -1.77
PDX1YGR193C UTP18P40362 594 aaPredicted RBP4.02□□□□□ -1.77
PDX1YGR193C RSC1P53236 928 aa4.02□□□□□ -1.77
PDX1YGR193C FOL1P53848 824 aa4.02□□□□□ -1.77
PDX1YGR193C RAD33Q04231 177 aa4.02□□□□□ -1.77
PDX1YGR193C BDF2Q07442 638 aa4.02□□□□□ -1.77
PDX1YGR193C RSB1Q08417 382 aa4.02□□□□□ -1.77
PDX1YGR193C BMS1Q08965 1183 aaKnown RBP4.02□□□□□ -1.77
PDX1YGR193C YRM1Q12340 786 aa4.02□□□□□ -1.77
PDX1YGR193C YOR131CQ12486 218 aa4.02□□□□□ -1.77
PDX1YGR193C TMA7Q3E764 64 aaKnown RBP4.02□□□□□ -1.77
PDX1YGR193C BRR1Q99177 341 aaPredicted RBP4.02□□□□□ -1.77
PDX1YGR193C RPB2P08518 1224 aaKnown RBP4.01□□□□□ -1.77
PDX1YGR193C CDC6P09119 513 aa4.01□□□□□ -1.77
PDX1YGR193C SWI6P09959 803 aa4.01□□□□□ -1.77
PDX1YGR193C PHO84P25297 587 aaKnown RBP4.01□□□□□ -1.77
PDX1YGR193C GFD2P25370 566 aaKnown RBP4.01□□□□□ -1.77
PDX1YGR193C PGS1P25578 521 aa4.01□□□□□ -1.77
PDX1YGR193C DAL80P26343 269 aa4.01□□□□□ -1.77
PDX1YGR193C SSH4P32343 579 aa4.01□□□□□ -1.77
PDX1YGR193C ATG19P35193 415 aa4.01□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms