RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W MET6P05694 767 aaKnown RBP1.06□□□□□ -2.24
CSE1YGL238W RPC82P32349 654 aa1.06□□□□□ -2.24
CSE1YGL238W SDP1P40479 209 aa1.06□□□□□ -2.24
CSE1YGL238W DLT1Q04216 342 aa1.06□□□□□ -2.24
CSE1YGL238W MET3P08536 511 aa1.06□□□□□ -2.24
CSE1YGL238W ADY2P25613 283 aa1.06□□□□□ -2.24
CSE1YGL238W ELO3P40319 345 aa1.06□□□□□ -2.24
CSE1YGL238W CCT7P42943 550 aaKnown RBP1.06□□□□□ -2.24
CSE1YGL238W RGC1Q06108 1083 aaKnown RBP1.06□□□□□ -2.24
CSE1YGL238W PEX19Q07418 342 aa1.06□□□□□ -2.24
CSE1YGL238W INO1P11986 533 aa1.05□□□□□ -2.24
CSE1YGL238W SEC20P28791 383 aa1.05□□□□□ -2.24
CSE1YGL238W HBS1P32769 611 aaKnown RBP1.05□□□□□ -2.24
CSE1YGL238W STE13P33894 931 aa1.05□□□□□ -2.24
CSE1YGL238W HOS4P40480 1083 aa1.05□□□□□ -2.24
CSE1YGL238W BAP3P41815 604 aa1.05□□□□□ -2.24
CSE1YGL238W THI12P42883 340 aa1.05□□□□□ -2.24
CSE1YGL238W THI5P43534 340 aa1.05□□□□□ -2.24
CSE1YGL238W YGL176CP46945 554 aa1.05□□□□□ -2.24
CSE1YGL238W PFD1P46988 109 aa1.05□□□□□ -2.24
CSE1YGL238W THI11P47183 340 aa1.05□□□□□ -2.24
CSE1YGL238W HDA1P53973 706 aa1.05□□□□□ -2.24
CSE1YGL238W RMD1Q03441 430 aa1.05□□□□□ -2.24
CSE1YGL238W THI13Q07748 340 aa1.05□□□□□ -2.24
CSE1YGL238W SIR3P06701 978 aa1.05□□□□□ -2.24
CSE1YGL238W CAF20P12962 161 aaKnown RBP1.05□□□□□ -2.24
CSE1YGL238W KIN3P22209 435 aa1.05□□□□□ -2.24
CSE1YGL238W MOT2P34909 587 aaKnown RBP1.05□□□□□ -2.24
CSE1YGL238W YJL163CP46996 555 aa1.05□□□□□ -2.24
CSE1YGL238W TMA46Q12000 345 aaKnown RBP1.05□□□□□ -2.24
CSE1YGL238W TRM11Q12463 433 aa1.05□□□□□ -2.24
CSE1YGL238W RGT1P32862 1170 aa1.04□□□□□ -2.24
CSE1YGL238W STE5P32917 917 aa1.04□□□□□ -2.24
CSE1YGL238W YKL069WP36088 180 aa1.04□□□□□ -2.24
CSE1YGL238W ERT1P38140 529 aa1.04□□□□□ -2.24
CSE1YGL238W PCL5P38794 229 aa1.04□□□□□ -2.24
CSE1YGL238W GAT1P43574 510 aa1.04□□□□□ -2.24
CSE1YGL238W RAI1P53063 387 aaKnown RBP1.04□□□□□ -2.24
CSE1YGL238W ASM4Q05166 528 aa1.04□□□□□ -2.24
CSE1YGL238W ESF1Q06344 628 aaKnown RBP1.04□□□□□ -2.24
CSE1YGL238W PHR1P05066 565 aaKnown RBP RIP-Chip data1.04□□□□□ -2.24not detected
CSE1YGL238W AGP1P25376 633 aa1.04□□□□□ -2.24
CSE1YGL238W SAH1P39954 449 aaKnown RBP1.04□□□□□ -2.24
CSE1YGL238W STB2P46679 850 aa1.04□□□□□ -2.24
CSE1YGL238W PUS2P53167 370 aa1.04□□□□□ -2.24
CSE1YGL238W YLR225CQ05948 407 aaKnown RBP1.04□□□□□ -2.24
CSE1YGL238W YPT1P01123 206 aaKnown RBP1.03□□□□□ -2.24
CSE1YGL238W RPD3P32561 433 aa1.03□□□□□ -2.24
CSE1YGL238W TY4A-JP47023 414 aa1.03□□□□□ -2.24
CSE1YGL238W FAA4P47912 694 aaKnown RBP1.03□□□□□ -2.24
CSE1YGL238W MUP1P50276 574 aa1.03□□□□□ -2.24
CSE1YGL238W RIA1P53893 1110 aa1.03□□□□□ -2.24
CSE1YGL238W ASI2P53895 289 aa1.03□□□□□ -2.24
CSE1YGL238W SMX3P54999 86 aaPredicted RBP1.03□□□□□ -2.24
CSE1YGL238W APM1Q00776 475 aaPredicted RBP1.03□□□□□ -2.24
CSE1YGL238W VPS16Q03308 798 aa1.03□□□□□ -2.24
CSE1YGL238W MRI1Q06489 411 aaKnown RBP1.03□□□□□ -2.24
CSE1YGL238W DMC1P25453 334 aa1.03□□□□□ -2.24
CSE1YGL238W HIR1P32479 840 aa1.03□□□□□ -2.24
CSE1YGL238W YKL107WP34251 309 aa1.03□□□□□ -2.24
CSE1YGL238W MBP1P39678 833 aa1.03□□□□□ -2.24
CSE1YGL238W POL32P47110 350 aa1.03□□□□□ -2.24
CSE1YGL238W HXT16P47185 567 aa1.03□□□□□ -2.24
CSE1YGL238W SHE9Q04172 456 aa1.03□□□□□ -2.24
CSE1YGL238W ABD1P32783 436 aaPredicted RBP1.02□□□□□ -2.25
CSE1YGL238W ORC2P32833 620 aa1.02□□□□□ -2.25
CSE1YGL238W MNR2P35724 969 aa1.02□□□□□ -2.25
CSE1YGL238W FKH2P41813 862 aa1.02□□□□□ -2.25
CSE1YGL238W DAM1P53267 343 aa1.02□□□□□ -2.25
CSE1YGL238W SRP1Q02821 542 aaKnown RBP1.02□□□□□ -2.25
CSE1YGL238W HMO1Q03973 246 aaKnown RBP1.02□□□□□ -2.25
CSE1YGL238W CRR1Q05790 422 aa1.02□□□□□ -2.25
CSE1YGL238W SWM1Q12379 170 aa1.02□□□□□ -2.25
CSE1YGL238W SBA1P28707 216 aaKnown RBP1.02□□□□□ -2.25
CSE1YGL238W PIN4P34217 668 aaKnown RBP RIP-Chip data1.02□□□□□ -2.25not detected
CSE1YGL238W SIC1P38634 284 aa1.02□□□□□ -2.25
CSE1YGL238W RPP1P38786 293 aa1.02□□□□□ -2.25
CSE1YGL238W BNA3P47039 444 aaKnown RBP1.02□□□□□ -2.25
CSE1YGL238W BPL1P48445 690 aaPredicted RBP1.02□□□□□ -2.25
CSE1YGL238W AMA1P50082 593 aa1.02□□□□□ -2.25
CSE1YGL238W YPR196WQ06595 470 aa1.02□□□□□ -2.25
CSE1YGL238W THI21Q08975 551 aa1.02□□□□□ -2.25
CSE1YGL238W NOT3P06102 836 aaKnown RBP1.02□□□□□ -2.25
CSE1YGL238W SPO11P23179 398 aa1.02□□□□□ -2.25
CSE1YGL238W CDC48P25694 835 aaKnown RBP1.02□□□□□ -2.25
CSE1YGL238W SNF7P39929 240 aaKnown RBP1.02□□□□□ -2.25
CSE1YGL238W UBC11P52492 156 aa1.02□□□□□ -2.25
CSE1YGL238W YKR011CQ02209 353 aa1.02□□□□□ -2.25
CSE1YGL238W SEG1Q04279 960 aa1.02□□□□□ -2.25
CSE1YGL238W SGO1Q08490 590 aa1.02□□□□□ -2.25
CSE1YGL238W MBR1P23493 339 aa1.01□□□□□ -2.25
CSE1YGL238W VBA5P36172 582 aa1.01□□□□□ -2.25
CSE1YGL238W BCD1P38772 366 aa1.01□□□□□ -2.25
CSE1YGL238W HRB1P38922 454 aaKnown RBP RIP-Chip data1.01□□□□□ -2.25not detected
CSE1YGL238W FHN1P53279 174 aa1.01□□□□□ -2.25
CSE1YGL238W YPL068CQ02749 293 aa1.01□□□□□ -2.25
CSE1YGL238W RIM13Q03792 727 aa1.01□□□□□ -2.25
CSE1YGL238W MUS81Q04149 632 aaPredicted RBP1.01□□□□□ -2.25
CSE1YGL238W IRC13Q08630 104 aa1.01□□□□□ -2.25
CSE1YGL238W OSW1Q08692 278 aa1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 114.7 ms