RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C AVO1Q08236 1176 aa3.16□□□□□ -1.9
PRE4YFR050C ALG6Q12001 544 aaKnown RBP3.16□□□□□ -1.9
PRE4YFR050C TY1A-LR4P0C2I8 440 aaKnown RBP3.15□□□□□ -1.91
PRE4YFR050C TY1A-DR6P0CX70 440 aa3.15□□□□□ -1.91
PRE4YFR050C TY1A-ER1P0CX71 440 aa3.15□□□□□ -1.91
PRE4YFR050C TY1A-LR2P0CX72 440 aa3.15□□□□□ -1.91
PRE4YFR050C TY1A-PLP0CX73 440 aa3.15□□□□□ -1.91
PRE4YFR050C TY1A-JR1P0CX74 440 aa3.15□□□□□ -1.91
PRE4YFR050C TY1A-LR3P0CX75 440 aa3.15□□□□□ -1.91
PRE4YFR050C TY1A-ML2P0CX76 440 aa3.15□□□□□ -1.91
PRE4YFR050C PRP9P19736 530 aaKnown RBP3.15□□□□□ -1.91
PRE4YFR050C EUG1P32474 517 aa3.15□□□□□ -1.91
PRE4YFR050C UGA4P32837 571 aa3.15□□□□□ -1.91
PRE4YFR050C PGM1P33401 570 aaKnown RBP3.15□□□□□ -1.91
PRE4YFR050C GPT2P36148 743 aa3.15□□□□□ -1.91
PRE4YFR050C FAF1P40546 346 aaPredicted RBP3.15□□□□□ -1.91
PRE4YFR050C ZAP1P47043 880 aa3.15□□□□□ -1.91
PRE4YFR050C SGM1P47166 707 aa3.15□□□□□ -1.91
PRE4YFR050C CSL4P53859 292 aaPredicted RBP3.15□□□□□ -1.91
PRE4YFR050C MDG1P53885 366 aa3.15□□□□□ -1.91
PRE4YFR050C TY1A-GR1Q12085 440 aa3.15□□□□□ -1.91
PRE4YFR050C YLR122CQ12312 125 aa3.15□□□□□ -1.91
PRE4YFR050C NSI1Q12457 570 aa3.15□□□□□ -1.91
PRE4YFR050C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.15□□□□□ -1.91
PRE4YFR050C TY1A-OLQ92392 440 aaKnown RBP3.15□□□□□ -1.91
PRE4YFR050C MEX67Q99257 599 aaKnown RBP3.15□□□□□ -1.91
PRE4YFR050C BRR2P32639 2163 aaKnown RBP3.14□□□□□ -1.91
PRE4YFR050C CHO2P05374 869 aaKnown RBP3.14□□□□□ -1.91
PRE4YFR050C MSH3P25336 1018 aa3.14□□□□□ -1.91
PRE4YFR050C RGT1P32862 1170 aa3.14□□□□□ -1.91
PRE4YFR050C OMA1P36163 345 aa3.14□□□□□ -1.91
PRE4YFR050C EXO5P38289 585 aa3.14□□□□□ -1.91
PRE4YFR050C SPL2P38839 148 aa3.14□□□□□ -1.91
PRE4YFR050C NMD3P38861 518 aaKnown RBP3.14□□□□□ -1.91
PRE4YFR050C ACA1P39970 489 aa3.14□□□□□ -1.91
PRE4YFR050C VAB2P40003 282 aa3.14□□□□□ -1.91
PRE4YFR050C RTR1P40084 226 aaPredicted RBP3.14□□□□□ -1.91
PRE4YFR050C YER158CP40095 573 aa3.14□□□□□ -1.91
PRE4YFR050C MMM1P41800 426 aa3.14□□□□□ -1.91
PRE4YFR050C MAF1P41910 395 aa3.14□□□□□ -1.91
PRE4YFR050C RPT4P53549 437 aaKnown RBP3.14□□□□□ -1.91
PRE4YFR050C ALO1P54783 526 aaKnown RBP3.14□□□□□ -1.91
PRE4YFR050C PNG1Q02890 363 aa3.14□□□□□ -1.91
PRE4YFR050C DUS4Q06063 367 aa3.14□□□□□ -1.91
PRE4YFR050C MED7Q08278 222 aa3.14□□□□□ -1.91
PRE4YFR050C LAA1P39526 2014 aa3.14□□□□□ -1.91
PRE4YFR050C MSB1P21339 1137 aaKnown RBP3.13□□□□□ -1.91
PRE4YFR050C PRE9P23638 258 aaKnown RBP3.13□□□□□ -1.91
PRE4YFR050C SRP40P32583 406 aaPredicted RBP3.13□□□□□ -1.91
PRE4YFR050C ARL1P38116 183 aaKnown RBP3.13□□□□□ -1.91
PRE4YFR050C HSE1P38753 452 aa3.13□□□□□ -1.91
PRE4YFR050C PEX28P38848 579 aa3.13□□□□□ -1.91
PRE4YFR050C RPS26AP39938 119 aaKnown RBP3.13□□□□□ -1.91
PRE4YFR050C RPS26BP39939 119 aaKnown RBP3.13□□□□□ -1.91
PRE4YFR050C LYS14P40971 790 aa3.13□□□□□ -1.91
PRE4YFR050C CIT3P43635 486 aa3.13□□□□□ -1.91
PRE4YFR050C YGR122WP53272 402 aa3.13□□□□□ -1.91
PRE4YFR050C ELA1P53861 379 aaPredicted RBP3.13□□□□□ -1.91
PRE4YFR050C HDA1P53973 706 aa3.13□□□□□ -1.91
PRE4YFR050C NOG1Q02892 647 aaKnown RBP3.13□□□□□ -1.91
PRE4YFR050C ADI1Q03677 179 aa3.13□□□□□ -1.91
PRE4YFR050C LAP2Q10740 671 aa3.13□□□□□ -1.91
PRE4YFR050C MCD1Q12158 566 aa3.13□□□□□ -1.91
PRE4YFR050C CYC7P00045 113 aa3.12□□□□□ -1.91
PRE4YFR050C HXK1P04806 485 aaKnown RBP3.12□□□□□ -1.91
PRE4YFR050C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
PRE4YFR050C SWI6P09959 803 aa3.12□□□□□ -1.91
PRE4YFR050C ATE1P16639 503 aa3.12□□□□□ -1.91
PRE4YFR050C VMA4P22203 233 aaKnown RBP3.12□□□□□ -1.91
PRE4YFR050C NFS1P25374 497 aa3.12□□□□□ -1.91
PRE4YFR050C SFP1P32432 683 aa3.12□□□□□ -1.91
PRE4YFR050C LIP5P32875 414 aa3.12□□□□□ -1.91
PRE4YFR050C YAR028WP39548 234 aa3.12□□□□□ -1.91
PRE4YFR050C MSH4P40965 878 aaPredicted RBP3.12□□□□□ -1.91
PRE4YFR050C MRPS18P42847 217 aa3.12□□□□□ -1.91
PRE4YFR050C SLS1P42900 643 aa3.12□□□□□ -1.91
PRE4YFR050C SPO74P45819 413 aa3.12□□□□□ -1.91
PRE4YFR050C YJL045WP47052 634 aa3.12□□□□□ -1.91
PRE4YFR050C YNR063WP53749 607 aa3.12□□□□□ -1.91
PRE4YFR050C DAK1P54838 584 aaKnown RBP3.12□□□□□ -1.91
PRE4YFR050C YPL109CQ02981 657 aa3.12□□□□□ -1.91
PRE4YFR050C MYO1P08964 1928 aa3.11□□□□□ -1.91
PRE4YFR050C TRP3P00937 484 aa3.11□□□□□ -1.91
PRE4YFR050C DED1P06634 604 aaKnown RBP3.11□□□□□ -1.91
PRE4YFR050C RPS4AP0CX35 261 aaKnown RBP3.11□□□□□ -1.91
PRE4YFR050C RPS4BP0CX36 261 aaKnown RBP3.11□□□□□ -1.91
PRE4YFR050C MCM2P29469 868 aa3.11□□□□□ -1.91
PRE4YFR050C PEP7P32609 515 aa3.11□□□□□ -1.91
PRE4YFR050C SMY2P32909 740 aaKnown RBP3.11□□□□□ -1.91
PRE4YFR050C NNK1P36003 928 aa3.11□□□□□ -1.91
PRE4YFR050C DRE2P36152 348 aa3.11□□□□□ -1.91
PRE4YFR050C YKR073CP36153 106 aa3.11□□□□□ -1.91
PRE4YFR050C NEM1P38757 446 aa3.11□□□□□ -1.91
PRE4YFR050C SCS3P53012 380 aa3.11□□□□□ -1.91
PRE4YFR050C YGR045CP53229 120 aa3.11□□□□□ -1.91
PRE4YFR050C VPS72Q03388 795 aa3.11□□□□□ -1.91
PRE4YFR050C UBX2Q04228 584 aa3.11□□□□□ -1.91
PRE4YFR050C PIG1Q06216 648 aa3.11□□□□□ -1.91
PRE4YFR050C YOR059CQ08448 450 aaKnown RBP3.11□□□□□ -1.91
PRE4YFR050C GPR1Q12361 961 aa3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms