RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W DAL7P21826 554 aa8.63□□□□□ -1.03
LCP5YER127W PER1P25625 357 aa8.63□□□□□ -1.03
LCP5YER127W YNL193WP53870 558 aa8.63□□□□□ -1.03
LCP5YER127W RSC3Q06639 885 aa8.63□□□□□ -1.03
LCP5YER127W TAF2P23255 1407 aa8.63□□□□□ -1.03
LCP5YER127W RPS9AO13516 197 aaKnown RBP8.62□□□□□ -1.03
LCP5YER127W GAL10P04397 699 aa8.62□□□□□ -1.03
LCP5YER127W YGR012WP53206 393 aa8.62□□□□□ -1.03
LCP5YER127W ATP25Q03153 612 aa8.62□□□□□ -1.03
LCP5YER127W SIZ1Q04195 904 aa8.62□□□□□ -1.03
LCP5YER127W HSF1P10961 833 aa8.61□□□□□ -1.03
LCP5YER127W MTC2P34246 357 aa8.61□□□□□ -1.03
LCP5YER127W RAI1P53063 387 aaKnown RBP8.61□□□□□ -1.03
LCP5YER127W NOG2P53742 486 aaKnown RBP8.61□□□□□ -1.03
LCP5YER127W REH1Q06709 432 aa8.61□□□□□ -1.03
LCP5YER127W RAD18P10862 487 aa8.6□□□□□ -1.03
LCP5YER127W URA1P28272 314 aaPredicted RBP8.6□□□□□ -1.03
LCP5YER127W STO1P34160 861 aaKnown RBP8.6□□□□□ -1.03
LCP5YER127W POL12P38121 705 aaPredicted RBP8.6□□□□□ -1.03
LCP5YER127W TY4A-JP47023 414 aa8.6□□□□□ -1.03
LCP5YER127W ZDS1P50111 915 aaKnown RBP8.6□□□□□ -1.03
LCP5YER127W TAD1P53065 400 aa8.6□□□□□ -1.03
LCP5YER127W YGL081WP53156 320 aa8.6□□□□□ -1.03
LCP5YER127W YNR029CP53729 429 aaKnown RBP8.6□□□□□ -1.03
LCP5YER127W SRD1P09007 221 aa8.59□□□□□ -1.03
LCP5YER127W CYS3P31373 394 aaKnown RBP8.59□□□□□ -1.03
LCP5YER127W STE13P33894 931 aa8.59□□□□□ -1.03
LCP5YER127W ROT1Q03691 256 aa8.59□□□□□ -1.03
LCP5YER127W SIN3P22579 1536 aa8.59□□□□□ -1.03
LCP5YER127W RPD3P32561 433 aa8.58□□□□□ -1.04
LCP5YER127W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.58□□□□□ -1.04not detected
LCP5YER127W PSP2P50109 593 aaKnown RBP8.58□□□□□ -1.04
LCP5YER127W CDA1Q06702 301 aa8.58□□□□□ -1.04
LCP5YER127W YCL002CP25565 263 aa8.57□□□□□ -1.04
LCP5YER127W MAC1P35192 417 aa8.57□□□□□ -1.04
LCP5YER127W SAP190P36123 1033 aa8.57□□□□□ -1.04
LCP5YER127W CAF16P43569 289 aa8.57□□□□□ -1.04
LCP5YER127W INP52P50942 1183 aa8.57□□□□□ -1.04
LCP5YER127W GTF1P53260 183 aaPredicted RBP8.57□□□□□ -1.04
LCP5YER127W SDA1P53313 767 aaKnown RBP8.57□□□□□ -1.04
LCP5YER127W SNO2P53823 222 aa8.57□□□□□ -1.04
LCP5YER127W HDA1P53973 706 aa8.57□□□□□ -1.04
LCP5YER127W LRS4Q04087 347 aaKnown RBP8.57□□□□□ -1.04
LCP5YER127W YDL177CQ12257 170 aa8.57□□□□□ -1.04
LCP5YER127W SSK2P53599 1579 aa8.56□□□□□ -1.04
LCP5YER127W TYE7P33122 291 aaPredicted RBP8.56□□□□□ -1.04
LCP5YER127W ALY2P47029 1046 aa8.56□□□□□ -1.04
LCP5YER127W PUS2P53167 370 aa8.56□□□□□ -1.04
LCP5YER127W SGD1Q06132 899 aa8.56□□□□□ -1.04
LCP5YER127W DFG16Q99234 619 aa8.56□□□□□ -1.04
LCP5YER127W YIL108WP40483 696 aaKnown RBP8.55□□□□□ -1.04
LCP5YER127W MND2P40577 368 aa8.55□□□□□ -1.04
LCP5YER127W YKR011CQ02209 353 aa8.55□□□□□ -1.04
LCP5YER127W PLB2Q03674 706 aa8.55□□□□□ -1.04
LCP5YER127W SSL1Q04673 461 aaPredicted RBP8.55□□□□□ -1.04
LCP5YER127W GRX4P32642 244 aa8.54□□□□□ -1.04
LCP5YER127W MCD4P36051 919 aa8.54□□□□□ -1.04
LCP5YER127W POA1P38218 177 aa8.54□□□□□ -1.04
LCP5YER127W RPN10P38886 268 aaKnown RBP8.54□□□□□ -1.04
LCP5YER127W UBP12P39538 1254 aa8.54□□□□□ -1.04
LCP5YER127W YEN1P40028 759 aa8.54□□□□□ -1.04
LCP5YER127W SHR5P41912 237 aa8.54□□□□□ -1.04
LCP5YER127W YLR001CQ07895 862 aa8.54□□□□□ -1.04
LCP5YER127W THI73Q07904 523 aa8.54□□□□□ -1.04
LCP5YER127W PRC1P00729 532 aa8.53□□□□□ -1.04
LCP5YER127W LRG1P35688 1017 aa8.53□□□□□ -1.04
LCP5YER127W RLP7P40693 322 aaKnown RBP8.53□□□□□ -1.04
LCP5YER127W GCV2P49095 1034 aa8.53□□□□□ -1.04
LCP5YER127W YCF1P39109 1515 aaKnown RBP8.53□□□□□ -1.04
LCP5YER127W SFL1P20134 766 aa8.52□□□□□ -1.05
LCP5YER127W PCL2P25693 308 aa8.52□□□□□ -1.05
LCP5YER127W LAM1P38851 1228 aa8.52□□□□□ -1.05
LCP5YER127W PMT3P47190 753 aa8.52□□□□□ -1.05
LCP5YER127W PBP1P53297 722 aaKnown RBP8.52□□□□□ -1.05
LCP5YER127W MRPL22P53881 309 aa8.52□□□□□ -1.05
LCP5YER127W SNP1Q00916 300 aaPredicted RBP8.52□□□□□ -1.05
LCP5YER127W TPO1Q07824 586 aa8.52□□□□□ -1.05
LCP5YER127W DIF1O13577 133 aa8.51□□□□□ -1.05
LCP5YER127W SPE1P08432 466 aa8.51□□□□□ -1.05
LCP5YER127W YEL1P34225 687 aa8.51□□□□□ -1.05
LCP5YER127W MET13P53128 600 aa8.51□□□□□ -1.05
LCP5YER127W YOR022CQ12204 715 aa8.51□□□□□ -1.05
LCP5YER127W NUP145P49687 1317 aa8.51□□□□□ -1.05
LCP5YER127W YGR237CP50089 785 aa8.5□□□□□ -1.05
LCP5YER127W IOC4Q04213 475 aa8.5□□□□□ -1.05
LCP5YER127W CRR1Q05790 422 aa8.5□□□□□ -1.05
LCP5YER127W SSD1P24276 1250 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
LCP5YER127W HOG1P32485 435 aa8.49□□□□□ -1.05
LCP5YER127W SET5P38890 526 aaKnown RBP8.49□□□□□ -1.05
LCP5YER127W HXT16P47185 567 aa8.49□□□□□ -1.05
LCP5YER127W AIM14P53109 570 aa8.49□□□□□ -1.05
LCP5YER127W YBR182C-AQ8TGU6 64 aa8.49□□□□□ -1.05
LCP5YER127W ATG19P35193 415 aa8.48□□□□□ -1.05
LCP5YER127W MEF2P39677 819 aa8.48□□□□□ -1.05
LCP5YER127W ECL1P48235 211 aa8.48□□□□□ -1.05
LCP5YER127W UME1Q03010 460 aa8.48□□□□□ -1.05
LCP5YER127W NHX1Q04121 633 aa8.48□□□□□ -1.05
LCP5YER127W WHI4Q07655 649 aaKnown RBP8.48□□□□□ -1.05
LCP5YER127W HAL9Q12180 1030 aa8.48□□□□□ -1.05
LCP5YER127W UFD4P33202 1483 aa8.48□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms