RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	SPE1	P08432	466 aa		2.86	□□□□□ -1.95
DOT6	YER088C	HSF1	P10961	833 aa		2.86	□□□□□ -1.95
DOT6	YER088C	EMC1	P25574	760 aa		2.86	□□□□□ -1.95
DOT6	YER088C	STE13	P33894	931 aa		2.86	□□□□□ -1.95
DOT6	YER088C	LST4	P34239	828 aa		2.86	□□□□□ -1.95
DOT6	YER088C	GDH3	P39708	457 aa		2.86	□□□□□ -1.95
DOT6	YER088C	RAI1	P53063	387 aa	Known RBP	2.86	□□□□□ -1.95
DOT6	YER088C	GTF1	P53260	183 aa	Predicted RBP	2.86	□□□□□ -1.95
DOT6	YER088C	HDA1	P53973	706 aa		2.86	□□□□□ -1.95
DOT6	YER088C	YAP6	Q03935	383 aa		2.86	□□□□□ -1.95
DOT6	YER088C	WHI4	Q07655	649 aa	Known RBP	2.86	□□□□□ -1.95
DOT6	YER088C	TAF2	P23255	1407 aa		2.86	□□□□□ -1.95
DOT6	YER088C	HIS5	P07172	385 aa		2.86	□□□□□ -1.95
DOT6	YER088C	STE14	P32584	239 aa		2.86	□□□□□ -1.95
DOT6	YER088C	SPC29	P33419	253 aa		2.86	□□□□□ -1.95
DOT6	YER088C	TOD6	P34219	525 aa		2.86	□□□□□ -1.95
DOT6	YER088C	EMC3	P36039	253 aa		2.86	□□□□□ -1.95
DOT6	YER088C	NCS6	P53088	359 aa		2.86	□□□□□ -1.95
DOT6	YER088C	PBP1	P53297	722 aa	Known RBP	2.86	□□□□□ -1.95
DOT6	YER088C	SSL1	Q04673	461 aa	Predicted RBP	2.86	□□□□□ -1.95
DOT6	YER088C	ACK1	Q07622	623 aa	Predicted RBP	2.86	□□□□□ -1.95
DOT6	YER088C	NOP12	Q08208	459 aa	Known RBP	2.86	□□□□□ -1.95
DOT6	YER088C	TOM70	P07213	617 aa	Known RBP	2.85	□□□□□ -1.95
DOT6	YER088C	ENA1	P13587	1091 aa		2.85	□□□□□ -1.95
DOT6	YER088C	RPD3	P32561	433 aa		2.85	□□□□□ -1.95
DOT6	YER088C	POA1	P38218	177 aa		2.85	□□□□□ -1.95
DOT6	YER088C	UBP5	P39944	805 aa		2.85	□□□□□ -1.95
DOT6	YER088C	ALG2	P43636	503 aa		2.85	□□□□□ -1.95
DOT6	YER088C	HXT16	P47185	567 aa		2.85	□□□□□ -1.95
DOT6	YER088C	ENA2	Q01896	1091 aa		2.85	□□□□□ -1.95
DOT6	YER088C	ATP25	Q03153	612 aa		2.85	□□□□□ -1.95
DOT6	YER088C	YPR196W	Q06595	470 aa		2.85	□□□□□ -1.95
DOT6	YER088C	RXT3	Q07458	294 aa		2.85	□□□□□ -1.95
DOT6	YER088C	UPC2	Q12151	913 aa		2.85	□□□□□ -1.95
DOT6	YER088C	ENA5	Q12691	1091 aa		2.85	□□□□□ -1.95
DOT6	YER088C	MDM12	Q92328	271 aa		2.85	□□□□□ -1.95
DOT6	YER088C	ESC1	Q03661	1658 aa	Known RBP	2.85	□□□□□ -1.95
DOT6	YER088C	SKI3	P17883	1432 aa	Known RBP	2.85	□□□□□ -1.95
DOT6	YER088C	ESP1	Q03018	1630 aa		2.85	□□□□□ -1.95
DOT6	YER088C	PHO8	P11491	566 aa		2.85	□□□□□ -1.95
DOT6	YER088C	URA1	P28272	314 aa	Predicted RBP	2.85	□□□□□ -1.95
DOT6	YER088C	FLR1	P38124	548 aa		2.85	□□□□□ -1.95
DOT6	YER088C	IRC24	P40580	263 aa		2.85	□□□□□ -1.95
DOT6	YER088C	HSV2	P50079	448 aa	Predicted RBP	2.85	□□□□□ -1.95
DOT6	YER088C	SPT20	P50875	604 aa		2.85	□□□□□ -1.95
DOT6	YER088C	RNH70	P53331	553 aa		2.85	□□□□□ -1.95
DOT6	YER088C	ALG12	P53730	551 aa		2.85	□□□□□ -1.95
DOT6	YER088C	SLU7	Q02775	382 aa	Known RBP	2.85	□□□□□ -1.95
DOT6	YER088C	YLR224W	Q05947	369 aa		2.85	□□□□□ -1.95
DOT6	YER088C	YLR125W	Q12138	136 aa		2.85	□□□□□ -1.95
DOT6	YER088C	TY1B-BR	Q12193	1756 aa		2.84	□□□□□ -1.95
DOT6	YER088C	TY1B-GR3	Q12316	1755 aa		2.84	□□□□□ -1.95
DOT6	YER088C	TY1B-OR	Q92393	1755 aa		2.84	□□□□□ -1.95
DOT6	YER088C	MPH2	P0CD99	609 aa		2.84	□□□□□ -1.95
DOT6	YER088C	MEF1	P25039	761 aa		2.84	□□□□□ -1.95
DOT6	YER088C	ATG19	P35193	415 aa		2.84	□□□□□ -1.95
DOT6	YER088C	TAF1	P46677	1066 aa		2.84	□□□□□ -1.95
DOT6	YER088C	YKR011C	Q02209	353 aa		2.84	□□□□□ -1.95
DOT6	YER088C	DNF1	P32660	1571 aa		2.84	□□□□□ -1.95
DOT6	YER088C	RKR1	Q04781	1562 aa		2.84	□□□□□ -1.95
DOT6	YER088C	UFD4	P33202	1483 aa		2.84	□□□□□ -1.96
DOT6	YER088C	MSH2	P25847	964 aa		2.83	□□□□□ -1.96
DOT6	YER088C	SCT1	P32784	759 aa		2.83	□□□□□ -1.96
DOT6	YER088C	RRP14	P36080	434 aa	Known RBP	2.83	□□□□□ -1.96
DOT6	YER088C	CLU1	Q03690	1277 aa	Known RBP	2.83	□□□□□ -1.96
DOT6	YER088C	LRS4	Q04087	347 aa	Known RBP	2.83	□□□□□ -1.96
DOT6	YER088C	YOR352W	Q08816	343 aa		2.83	□□□□□ -1.96
DOT6	YER088C	LAS17	Q12446	633 aa		2.83	□□□□□ -1.96
DOT6	YER088C	KCS1	Q12494	1050 aa		2.83	□□□□□ -1.96
DOT6	YER088C	CHD1	P32657	1468 aa		2.83	□□□□□ -1.96
DOT6	YER088C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	2.83	□□□□□ -1.96	not detected
DOT6	YER088C	YCL002C	P25565	263 aa		2.83	□□□□□ -1.96
DOT6	YER088C	TYE7	P33122	291 aa	Predicted RBP	2.83	□□□□□ -1.96
DOT6	YER088C	MTC2	P34246	357 aa		2.83	□□□□□ -1.96
DOT6	YER088C	CTF8	P38877	133 aa		2.83	□□□□□ -1.96
DOT6	YER088C	PLB1	P39105	664 aa		2.83	□□□□□ -1.96
DOT6	YER088C	CEP3	P40969	608 aa		2.83	□□□□□ -1.96
DOT6	YER088C	OSW7	P43611	510 aa		2.83	□□□□□ -1.96
DOT6	YER088C	PSP2	P50109	593 aa	Known RBP	2.83	□□□□□ -1.96
DOT6	YER088C	EXG2	P52911	562 aa		2.83	□□□□□ -1.96
DOT6	YER088C	TAD1	P53065	400 aa		2.83	□□□□□ -1.96
DOT6	YER088C	DAM1	P53267	343 aa		2.83	□□□□□ -1.96
DOT6	YER088C	IRC20	Q06554	1556 aa		2.82	□□□□□ -1.96
DOT6	YER088C	TY2B-LR1	P0C2J3	1770 aa		2.82	□□□□□ -1.96
DOT6	YER088C	TY2B-F	P0CX63	1770 aa		2.82	□□□□□ -1.96
DOT6	YER088C	TY2B-GR2	P0CX64	1770 aa		2.82	□□□□□ -1.96
DOT6	YER088C	TY2B-C	P25384	1770 aa		2.82	□□□□□ -1.96
DOT6	YER088C	TY2B-DR2	Q03494	1770 aa		2.82	□□□□□ -1.96
DOT6	YER088C	TY1B-DR1	Q03855	1755 aa		2.82	□□□□□ -1.96
DOT6	YER088C	TY2B-DR3	Q07791	1770 aa	Known RBP	2.82	□□□□□ -1.96
DOT6	YER088C	TY2B-OR1	Q12113	1770 aa		2.82	□□□□□ -1.96
DOT6	YER088C	TY2B-DR1	Q12472	1770 aa		2.82	□□□□□ -1.96
DOT6	YER088C	TY2B-OR2	Q12501	1770 aa		2.82	□□□□□ -1.96
DOT6	YER088C	YLR358C	O13565	187 aa		2.82	□□□□□ -1.96
DOT6	YER088C	RAD53	P22216	821 aa		2.82	□□□□□ -1.96
DOT6	YER088C	SDP1	P40479	209 aa		2.82	□□□□□ -1.96
DOT6	YER088C	RSC3	Q06639	885 aa		2.82	□□□□□ -1.96
DOT6	YER088C	MET7	Q08645	548 aa		2.82	□□□□□ -1.96
DOT6	YER088C	THI21	Q08975	551 aa		2.82	□□□□□ -1.96
DOT6	YER088C	HAL9	Q12180	1030 aa		2.82	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 82 ms