RNA–Protein interactions for RNA: YER052C

HOM3, Transcript of Aspartate kinase (L-aspartate 4-P-transferase), yeast

Gene HOM3, Length 1,584 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOM3	YER052C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.91	□□□□□ -1.62
HOM3	YER052C	TY1A-OL	Q92392	440 aa	Known RBP	4.91	□□□□□ -1.62
HOM3	YER052C	MER1	P16523	270 aa		4.9	□□□□□ -1.63
HOM3	YER052C	CLN1	P20437	546 aa		4.9	□□□□□ -1.63
HOM3	YER052C	SYP1	P25623	870 aa	Known RBP	4.9	□□□□□ -1.63
HOM3	YER052C	SSH4	P32343	579 aa		4.9	□□□□□ -1.63
HOM3	YER052C	MKK2	P32491	506 aa		4.9	□□□□□ -1.63
HOM3	YER052C	STO1	P34160	861 aa	Known RBP	4.9	□□□□□ -1.63
HOM3	YER052C	YKL222C	P35995	705 aa		4.9	□□□□□ -1.63
HOM3	YER052C	NEM1	P38757	446 aa		4.9	□□□□□ -1.63
HOM3	YER052C	MEF2	P39677	819 aa		4.9	□□□□□ -1.63
HOM3	YER052C	CHZ1	P40019	153 aa	Predicted RBP	4.9	□□□□□ -1.63
HOM3	YER052C	NDE1	P40215	560 aa		4.9	□□□□□ -1.63
HOM3	YER052C	IRR1	P40541	1150 aa		4.9	□□□□□ -1.63
HOM3	YER052C	SLS1	P42900	643 aa		4.9	□□□□□ -1.63
HOM3	YER052C	OCA1	P50946	238 aa	Predicted RBP	4.9	□□□□□ -1.63
HOM3	YER052C	TAN1	P53072	289 aa	Predicted RBP	4.9	□□□□□ -1.63
HOM3	YER052C	MEC3	Q02574	474 aa		4.9	□□□□□ -1.63
HOM3	YER052C	CWC21	Q03375	135 aa	Known RBP	4.9	□□□□□ -1.63
HOM3	YER052C	RKM2	Q03942	479 aa		4.9	□□□□□ -1.63
HOM3	YER052C	RNH1	Q04740	348 aa		4.9	□□□□□ -1.63
HOM3	YER052C	YPL191C	Q08930	360 aa		4.9	□□□□□ -1.63
HOM3	YER052C	ATP4	P05626	244 aa		4.89	□□□□□ -1.63
HOM3	YER052C	INO1	P11986	533 aa		4.89	□□□□□ -1.63
HOM3	YER052C	PDC5	P16467	563 aa	Known RBP	4.89	□□□□□ -1.63
HOM3	YER052C	YEF3	P16521	1044 aa	Known RBP	4.89	□□□□□ -1.63
HOM3	YER052C	SAC7	P17121	654 aa		4.89	□□□□□ -1.63
HOM3	YER052C	TPM1	P17536	199 aa	Known RBP	4.89	□□□□□ -1.63
HOM3	YER052C	RPB4	P20433	221 aa	Predicted RBP	4.89	□□□□□ -1.63
HOM3	YER052C	ABD1	P32783	436 aa	Predicted RBP	4.89	□□□□□ -1.63
HOM3	YER052C	YKL050C	P35736	922 aa		4.89	□□□□□ -1.63
HOM3	YER052C	YBR184W	P38299	523 aa		4.89	□□□□□ -1.63
HOM3	YER052C	OTU2	P38747	307 aa	Known RBP	4.89	□□□□□ -1.63
HOM3	YER052C	PAN5	P38787	379 aa		4.89	□□□□□ -1.63
HOM3	YER052C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	RIP-Chip
HOM3	YER052C	SAP185	P40856	1058 aa		4.89	□□□□□ -1.63
HOM3	YER052C	RSC8	P43609	557 aa	Known RBP	4.89	□□□□□ -1.63
HOM3	YER052C	YMR111C	Q04461	462 aa	Predicted RBP	4.89	□□□□□ -1.63
HOM3	YER052C	YMR074C	Q04773	145 aa		4.89	□□□□□ -1.63
HOM3	YER052C	ARV1	Q06541	321 aa		4.89	□□□□□ -1.63
HOM3	YER052C	LAP2	Q10740	671 aa		4.89	□□□□□ -1.63
HOM3	YER052C	PDR15	Q04182	1529 aa	Known RBP	4.89	□□□□□ -1.63
HOM3	YER052C	ARO1	P08566	1588 aa	Known RBP	4.88	□□□□□ -1.63
HOM3	YER052C	HNM1	P19807	563 aa		4.88	□□□□□ -1.63
HOM3	YER052C	HSP60	P19882	572 aa	Known RBP	4.88	□□□□□ -1.63
HOM3	YER052C	SUI2	P20459	304 aa	Known RBP	4.88	□□□□□ -1.63
HOM3	YER052C	SMY1	P32364	656 aa	Known RBP	4.88	□□□□□ -1.63
HOM3	YER052C	HIR1	P32479	840 aa		4.88	□□□□□ -1.63
HOM3	YER052C	SCT1	P32784	759 aa		4.88	□□□□□ -1.63
HOM3	YER052C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
HOM3	YER052C	VBA5	P36172	582 aa		4.88	□□□□□ -1.63
HOM3	YER052C	PBY1	P38254	753 aa		4.88	□□□□□ -1.63
HOM3	YER052C	REI1	P38344	393 aa	Predicted RBP	4.88	□□□□□ -1.63
HOM3	YER052C	ETP1	P38748	585 aa	Known RBP	4.88	□□□□□ -1.63
HOM3	YER052C	GGA2	P38817	585 aa	Known RBP	4.88	□□□□□ -1.63
HOM3	YER052C	POP2	P39008	433 aa		4.88	□□□□□ -1.63
HOM3	YER052C	NUP82	P40368	713 aa		4.88	□□□□□ -1.63
HOM3	YER052C	VTC2	P43585	828 aa		4.88	□□□□□ -1.63
HOM3	YER052C	CNN1	P43618	361 aa		4.88	□□□□□ -1.63
HOM3	YER052C	SET2	P46995	733 aa	Known RBP	4.88	□□□□□ -1.63
HOM3	YER052C	CCM1	P48237	864 aa	Predicted RBP	4.88	□□□□□ -1.63
HOM3	YER052C	YGR125W	P53273	1036 aa		4.88	□□□□□ -1.63
HOM3	YER052C	YLR225C	Q05948	407 aa	Known RBP	4.88	□□□□□ -1.63
HOM3	YER052C	SWA2	Q06677	668 aa		4.88	□□□□□ -1.63
HOM3	YER052C	FLC1	Q08967	793 aa		4.88	□□□□□ -1.63
HOM3	YER052C	RKM4	Q12504	494 aa		4.88	□□□□□ -1.63
HOM3	YER052C	GPM1	P00950	247 aa	Known RBP	4.87	□□□□□ -1.63
HOM3	YER052C	DBP5	P20449	482 aa	Known RBP	4.87	□□□□□ -1.63
HOM3	YER052C	PGS1	P25578	521 aa		4.87	□□□□□ -1.63
HOM3	YER052C	ECM32	P32644	1121 aa	Known RBP	4.87	□□□□□ -1.63
HOM3	YER052C	SMY2	P32909	740 aa	Known RBP	4.87	□□□□□ -1.63
HOM3	YER052C	PXA2	P34230	853 aa		4.87	□□□□□ -1.63
HOM3	YER052C	YKL107W	P34251	309 aa		4.87	□□□□□ -1.63
HOM3	YER052C	MCM7	P38132	845 aa		4.87	□□□□□ -1.63
HOM3	YER052C	ALG14	P38242	237 aa		4.87	□□□□□ -1.63
HOM3	YER052C	TIF5	P38431	405 aa	Known RBP	4.87	□□□□□ -1.63
HOM3	YER052C	CCT3	P39077	534 aa	Known RBP	4.87	□□□□□ -1.63
HOM3	YER052C	TED1	P40533	473 aa		4.87	□□□□□ -1.63
HOM3	YER052C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
HOM3	YER052C	ERP6	P53198	216 aa		4.87	□□□□□ -1.63
HOM3	YER052C	TIF35	Q04067	274 aa	Known RBP	4.87	□□□□□ -1.63
HOM3	YER052C	RAD33	Q04231	177 aa		4.87	□□□□□ -1.63
HOM3	YER052C	GIS4	Q04233	774 aa		4.87	□□□□□ -1.63
HOM3	YER052C	COG8	Q04632	607 aa		4.87	□□□□□ -1.63
HOM3	YER052C	SPP382	Q06411	708 aa	Predicted RBP	4.87	□□□□□ -1.63
HOM3	YER052C	NAR1	P23503	491 aa	Known RBP	4.87	□□□□□ -1.63
HOM3	YER052C	PHO84	P25297	587 aa	Known RBP	4.87	□□□□□ -1.63
HOM3	YER052C	MSH2	P25847	964 aa		4.87	□□□□□ -1.63
HOM3	YER052C	MOT2	P34909	587 aa	Known RBP	4.87	□□□□□ -1.63
HOM3	YER052C	ATG19	P35193	415 aa		4.87	□□□□□ -1.63
HOM3	YER052C	KDX1	P36005	433 aa		4.87	□□□□□ -1.63
HOM3	YER052C	SEA4	P38164	1038 aa		4.87	□□□□□ -1.63
HOM3	YER052C	VPS41	P38959	992 aa		4.87	□□□□□ -1.63
HOM3	YER052C	HNT2	P49775	206 aa		4.87	□□□□□ -1.63
HOM3	YER052C	YNR063W	P53749	607 aa		4.87	□□□□□ -1.63
HOM3	YER052C	ZDS2	P54786	942 aa		4.87	□□□□□ -1.63
HOM3	YER052C	SND1	Q04007	877 aa		4.87	□□□□□ -1.63
HOM3	YER052C	RRB1	Q04225	511 aa	Known RBP	4.87	□□□□□ -1.63
HOM3	YER052C	YLH47	Q06493	454 aa		4.87	□□□□□ -1.63
HOM3	YER052C	HMI1	Q12039	706 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms