RNA–Protein interactions for RNA: YDR121W

DPB4, Transcript of Subunit of DNA pol epsilon and of ISW2 chromatin accessibility complex, yeast

Gene DPB4, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DPB4	YDR121W	UBP15	P50101	1230 aa		4.91	□□□□□ -1.62
DPB4	YDR121W	PIB2	P53191	635 aa		4.91	□□□□□ -1.62
DPB4	YDR121W	YGR125W	P53273	1036 aa		4.91	□□□□□ -1.62
DPB4	YDR121W	TDA6	Q06466	467 aa		4.91	□□□□□ -1.62
DPB4	YDR121W	UTP4	Q06679	776 aa	Known RBP	4.91	□□□□□ -1.62
DPB4	YDR121W	GCR1	P07261	785 aa		4.9	□□□□□ -1.63
DPB4	YDR121W	PRO3	P32263	286 aa	Known RBP	4.9	□□□□□ -1.63
DPB4	YDR121W	THI4	P32318	326 aa		4.9	□□□□□ -1.63
DPB4	YDR121W	SHP1	P34223	423 aa		4.9	□□□□□ -1.63
DPB4	YDR121W	PHO88	P38264	188 aa	Predicted RBP	4.9	□□□□□ -1.63
DPB4	YDR121W	NOC2	P39744	710 aa	Known RBP	4.9	□□□□□ -1.63
DPB4	YDR121W	ALA1	P40825	983 aa	Known RBP	4.9	□□□□□ -1.63
DPB4	YDR121W	MLC1	P53141	149 aa		4.9	□□□□□ -1.63
DPB4	YDR121W	YGL039W	P53183	348 aa	Known RBP	4.9	□□□□□ -1.63
DPB4	YDR121W	SUB1	P54000	292 aa	Known RBP	4.9	□□□□□ -1.63
DPB4	YDR121W	ADE12	P80210	433 aa	Known RBP	4.9	□□□□□ -1.63
DPB4	YDR121W	UTP14	Q04500	899 aa	Known RBP	4.9	□□□□□ -1.63
DPB4	YDR121W	TMA64	Q04600	565 aa	Known RBP	4.9	□□□□□ -1.63
DPB4	YDR121W	FLC1	Q08967	793 aa		4.9	□□□□□ -1.63
DPB4	YDR121W	TY1A-DR3	Q12441	440 aa		4.9	□□□□□ -1.63
DPB4	YDR121W	YDR524C-B	Q3E6R4	66 aa		4.9	□□□□□ -1.63
DPB4	YDR121W	RAD61	Q99359	647 aa		4.9	□□□□□ -1.63
DPB4	YDR121W	LAM4	P38800	1345 aa		4.9	□□□□□ -1.63
DPB4	YDR121W	PDR18	P53756	1333 aa		4.9	□□□□□ -1.63
DPB4	YDR121W	CHO2	P05374	869 aa	Known RBP	4.89	□□□□□ -1.63
DPB4	YDR121W	COQ1	P18900	473 aa		4.89	□□□□□ -1.63
DPB4	YDR121W	TGL1	P34163	548 aa		4.89	□□□□□ -1.63
DPB4	YDR121W	YKR018C	P36114	725 aa		4.89	□□□□□ -1.63
DPB4	YDR121W	ECM21	P38167	1117 aa	Known RBP	4.89	□□□□□ -1.63
DPB4	YDR121W	MSC7	P38694	644 aa		4.89	□□□□□ -1.63
DPB4	YDR121W	TOM71	P38825	639 aa	Known RBP	4.89	□□□□□ -1.63
DPB4	YDR121W	YHR131C	P38835	850 aa		4.89	□□□□□ -1.63
DPB4	YDR121W	RTS1	P38903	757 aa		4.89	□□□□□ -1.63
DPB4	YDR121W	SSN3	P39073	555 aa		4.89	□□□□□ -1.63
DPB4	YDR121W	RSP5	P39940	809 aa	Known RBP	4.89	□□□□□ -1.63
DPB4	YDR121W	YGL081W	P53156	320 aa		4.89	□□□□□ -1.63
DPB4	YDR121W	SOL4	P53315	255 aa		4.89	□□□□□ -1.63
DPB4	YDR121W	EEB1	Q02891	456 aa		4.89	□□□□□ -1.63
DPB4	YDR121W	SLD5	Q03406	294 aa		4.89	□□□□□ -1.63
DPB4	YDR121W	ADI1	Q03677	179 aa		4.89	□□□□□ -1.63
DPB4	YDR121W	DUS3	Q06053	668 aa	Known RBP	4.89	□□□□□ -1.63
DPB4	YDR121W	MRL1	Q06815	381 aa		4.89	□□□□□ -1.63
DPB4	YDR121W	RTT10	Q08924	1013 aa		4.89	□□□□□ -1.63
DPB4	YDR121W	POX1	P13711	748 aa		4.88	□□□□□ -1.63
DPB4	YDR121W	GAL11	P19659	1081 aa		4.88	□□□□□ -1.63
DPB4	YDR121W	ACE2	P21192	770 aa		4.88	□□□□□ -1.63
DPB4	YDR121W	PBY1	P38254	753 aa		4.88	□□□□□ -1.63
DPB4	YDR121W	YBR184W	P38299	523 aa		4.88	□□□□□ -1.63
DPB4	YDR121W	MCX1	P38323	520 aa	Predicted RBP	4.88	□□□□□ -1.63
DPB4	YDR121W	YMR265C	Q03508	461 aa	Known RBP	4.88	□□□□□ -1.63
DPB4	YDR121W	YMR321C	Q04898	105 aa		4.88	□□□□□ -1.63
DPB4	YDR121W	MRD1	Q06106	887 aa	Known RBP	4.88	□□□□□ -1.63
DPB4	YDR121W	ERP3	Q12403	225 aa		4.88	□□□□□ -1.63
DPB4	YDR121W	RIF1	P29539	1916 aa		4.87	□□□□□ -1.63
DPB4	YDR121W	STE5	P32917	917 aa		4.87	□□□□□ -1.63
DPB4	YDR121W	DBP7	P36120	742 aa	Known RBP	4.87	□□□□□ -1.63
DPB4	YDR121W	ISW1	P38144	1129 aa		4.87	□□□□□ -1.63
DPB4	YDR121W	CRP1	P38845	465 aa	Known RBP	4.87	□□□□□ -1.63
DPB4	YDR121W	TPM2	P40414	161 aa		4.87	□□□□□ -1.63
DPB4	YDR121W	FOL2	P51601	243 aa	Known RBP	4.87	□□□□□ -1.63
DPB4	YDR121W	YRB30	P53107	440 aa	Predicted RBP	4.87	□□□□□ -1.63
DPB4	YDR121W	MRPS35	P53292	345 aa		4.87	□□□□□ -1.63
DPB4	YDR121W	DAK1	P54838	584 aa	Known RBP	4.87	□□□□□ -1.63
DPB4	YDR121W	CTR9	P89105	1077 aa		4.87	□□□□□ -1.63
DPB4	YDR121W	YMR187C	Q03236	431 aa		4.87	□□□□□ -1.63
DPB4	YDR121W	VPS72	Q03388	795 aa		4.87	□□□□□ -1.63
DPB4	YDR121W	SPH1	Q06160	661 aa		4.87	□□□□□ -1.63
DPB4	YDR121W	SUE1	Q06524	206 aa		4.87	□□□□□ -1.63
DPB4	YDR121W	TAH18	Q12181	623 aa		4.87	□□□□□ -1.63
DPB4	YDR121W	OSH2	Q12451	1283 aa		4.87	□□□□□ -1.63
DPB4	YDR121W	YCK2	P23292	546 aa	Known RBP	4.86	□□□□□ -1.63
DPB4	YDR121W	CAD1	P24813	409 aa	Known RBP	4.86	□□□□□ -1.63
DPB4	YDR121W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
DPB4	YDR121W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
DPB4	YDR121W	DUR3	P33413	735 aa		4.86	□□□□□ -1.63
DPB4	YDR121W	SHM1	P37292	490 aa	Predicted RBP	4.86	□□□□□ -1.63
DPB4	YDR121W	FLR1	P38124	548 aa		4.86	□□□□□ -1.63
DPB4	YDR121W	GIP1	P38229	639 aa		4.86	□□□□□ -1.63
DPB4	YDR121W	ECM2	P38241	364 aa	Known RBP	4.86	□□□□□ -1.63
DPB4	YDR121W	NDT80	P38830	627 aa		4.86	□□□□□ -1.63
DPB4	YDR121W	VPS8	P39702	1274 aa		4.86	□□□□□ -1.63
DPB4	YDR121W	SLN1	P39928	1220 aa	Predicted RBP	4.86	□□□□□ -1.63
DPB4	YDR121W	YTA6	P40328	754 aa		4.86	□□□□□ -1.63
DPB4	YDR121W	RSM26	P47141	266 aa		4.86	□□□□□ -1.63
DPB4	YDR121W	ENP2	P48234	707 aa	Known RBP	4.86	□□□□□ -1.63
DPB4	YDR121W	CTR1	P49573	406 aa		4.86	□□□□□ -1.63
DPB4	YDR121W	KRE33	P53914	1056 aa	Known RBP	4.86	□□□□□ -1.63
DPB4	YDR121W	ESC2	Q06340	456 aa		4.86	□□□□□ -1.63
DPB4	YDR121W	YOR296W	Q08748	1289 aa		4.86	□□□□□ -1.63
DPB4	YDR121W	FKS1	P38631	1876 aa	Known RBP	4.86	□□□□□ -1.63
DPB4	YDR121W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
DPB4	YDR121W	RPS31	P05759	152 aa	Known RBP	4.85	□□□□□ -1.63
DPB4	YDR121W	HEM1	P09950	548 aa	Predicted RBP	4.85	□□□□□ -1.63
DPB4	YDR121W	TKL1	P23254	680 aa	Known RBP	4.85	□□□□□ -1.63
DPB4	YDR121W	RPL8B	P29453	256 aa	Known RBP	4.85	□□□□□ -1.63
DPB4	YDR121W	KAP122	P32767	1081 aa		4.85	□□□□□ -1.63
DPB4	YDR121W	ABD1	P32783	436 aa	Predicted RBP	4.85	□□□□□ -1.63
DPB4	YDR121W	SQT1	P35184	431 aa		4.85	□□□□□ -1.63
DPB4	YDR121W	MCR1	P36060	302 aa	Known RBP	4.85	□□□□□ -1.63
DPB4	YDR121W	AIM46	P38885	310 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 44 ms