RNA–Protein interactions for RNA: YDR088C

SLU7, Transcript of RNA splicing factor, yeast

Gene SLU7, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLU7	YDR088C	KRI1	P42846	591 aa	Known RBP	4.64	□□□□□ -1.67
SLU7	YDR088C	TIM44	Q01852	431 aa		4.64	□□□□□ -1.67
SLU7	YDR088C	SRP1	Q02821	542 aa	Known RBP	4.64	□□□□□ -1.67
SLU7	YDR088C	YPR196W	Q06595	470 aa		4.64	□□□□□ -1.67
SLU7	YDR088C	ALG7	P07286	448 aa		4.63	□□□□□ -1.67
SLU7	YDR088C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
SLU7	YDR088C	CUE2	P36075	443 aa	Known RBP	4.63	□□□□□ -1.67
SLU7	YDR088C	PBY1	P38254	753 aa		4.63	□□□□□ -1.67
SLU7	YDR088C	SNF7	P39929	240 aa	Known RBP	4.63	□□□□□ -1.67
SLU7	YDR088C	YER158C	P40095	573 aa		4.63	□□□□□ -1.67
SLU7	YDR088C	RAI1	P53063	387 aa	Known RBP	4.63	□□□□□ -1.67
SLU7	YDR088C	GND2	P53319	492 aa		4.63	□□□□□ -1.67
SLU7	YDR088C	UBX5	Q06682	500 aa		4.63	□□□□□ -1.67
SLU7	YDR088C	PPR1	P07272	904 aa	Predicted RBP	4.62	□□□□□ -1.67
SLU7	YDR088C	RPC82	P32349	654 aa		4.62	□□□□□ -1.67
SLU7	YDR088C	SPC42	P36094	363 aa		4.62	□□□□□ -1.67
SLU7	YDR088C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SLU7	YDR088C	SNM1	P40993	198 aa		4.62	□□□□□ -1.67
SLU7	YDR088C	GYP7	P48365	746 aa		4.62	□□□□□ -1.67
SLU7	YDR088C	DUS3	Q06053	668 aa	Known RBP	4.62	□□□□□ -1.67
SLU7	YDR088C	ALR2	P43553	858 aa		4.61	□□□□□ -1.67
SLU7	YDR088C	YGR125W	P53273	1036 aa		4.61	□□□□□ -1.67
SLU7	YDR088C	ERG5	P54781	538 aa		4.61	□□□□□ -1.67
SLU7	YDR088C	SSL1	Q04673	461 aa	Predicted RBP	4.61	□□□□□ -1.67
SLU7	YDR088C	FLC1	Q08967	793 aa		4.61	□□□□□ -1.67
SLU7	YDR088C	NOT3	P06102	836 aa	Known RBP	4.6	□□□□□ -1.67
SLU7	YDR088C	CIT2	P08679	460 aa		4.6	□□□□□ -1.67
SLU7	YDR088C	HBS1	P32769	611 aa	Known RBP	4.6	□□□□□ -1.67
SLU7	YDR088C	TSL1	P38427	1098 aa	Known RBP	4.6	□□□□□ -1.67
SLU7	YDR088C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
SLU7	YDR088C	ERP6	P53198	216 aa		4.6	□□□□□ -1.67
SLU7	YDR088C	RPN4	Q03465	531 aa		4.6	□□□□□ -1.67
SLU7	YDR088C	EAF1	Q06337	982 aa		4.6	□□□□□ -1.67
SLU7	YDR088C	YDR306C	Q06640	478 aa		4.6	□□□□□ -1.67
SLU7	YDR088C	OSH2	Q12451	1283 aa		4.6	□□□□□ -1.67
SLU7	YDR088C	CIT1	P00890	479 aa		4.59	□□□□□ -1.67
SLU7	YDR088C	ARE1	P25628	610 aa		4.59	□□□□□ -1.67
SLU7	YDR088C	SEC21	P32074	935 aa	Known RBP	4.59	□□□□□ -1.67
SLU7	YDR088C	RSP5	P39940	809 aa	Known RBP	4.59	□□□□□ -1.67
SLU7	YDR088C	BUD6	P41697	788 aa		4.59	□□□□□ -1.67
SLU7	YDR088C	UTP8	P53276	713 aa	Known RBP	4.59	□□□□□ -1.67
SLU7	YDR088C	SPO75	Q07798	868 aa		4.59	□□□□□ -1.67
SLU7	YDR088C	PRP9	P19736	530 aa	Known RBP	4.58	□□□□□ -1.68
SLU7	YDR088C	HSP60	P19882	572 aa	Known RBP	4.58	□□□□□ -1.68
SLU7	YDR088C	TIM23	P32897	222 aa		4.58	□□□□□ -1.68
SLU7	YDR088C	ERT1	P38140	529 aa		4.58	□□□□□ -1.68
SLU7	YDR088C	RTA1	P53047	317 aa		4.58	□□□□□ -1.68
SLU7	YDR088C	FPR4	Q06205	392 aa	Predicted RBP	4.58	□□□□□ -1.68
SLU7	YDR088C	PEX19	Q07418	342 aa		4.58	□□□□□ -1.68
SLU7	YDR088C	YOR131C	Q12486	218 aa		4.58	□□□□□ -1.68
SLU7	YDR088C	ERR1	P0CX10	437 aa		4.57	□□□□□ -1.68
SLU7	YDR088C	ERR2	P0CX11	437 aa		4.57	□□□□□ -1.68
SLU7	YDR088C	NPP1	P25353	742 aa		4.57	□□□□□ -1.68
SLU7	YDR088C	CDC48	P25694	835 aa	Known RBP	4.57	□□□□□ -1.68
SLU7	YDR088C	AFR1	P33304	620 aa		4.57	□□□□□ -1.68
SLU7	YDR088C	TAF8	Q03750	510 aa		4.57	□□□□□ -1.68
SLU7	YDR088C	CAN1	P04817	590 aa		4.56	□□□□□ -1.68
SLU7	YDR088C	TOP3	P13099	656 aa		4.56	□□□□□ -1.68
SLU7	YDR088C	GAL11	P19659	1081 aa		4.56	□□□□□ -1.68
SLU7	YDR088C	PPH3	P32345	308 aa		4.56	□□□□□ -1.68
SLU7	YDR088C	AAR2	P32357	355 aa	Predicted RBP	4.56	□□□□□ -1.68
SLU7	YDR088C	RPD3	P32561	433 aa		4.56	□□□□□ -1.68
SLU7	YDR088C	PEX2	P32800	271 aa		4.56	□□□□□ -1.68
SLU7	YDR088C	STE13	P33894	931 aa		4.56	□□□□□ -1.68
SLU7	YDR088C	BET3	P36149	193 aa		4.56	□□□□□ -1.68
SLU7	YDR088C	PPS1	P38148	807 aa		4.56	□□□□□ -1.68
SLU7	YDR088C	YBR284W	P38150	797 aa		4.56	□□□□□ -1.68
SLU7	YDR088C	SDS3	P40505	327 aa		4.56	□□□□□ -1.68
SLU7	YDR088C	FRE5	Q08908	694 aa		4.56	□□□□□ -1.68
SLU7	YDR088C	HBN1	Q96VH4	193 aa		4.56	□□□□□ -1.68
SLU7	YDR088C	YKR078W	P36158	585 aa	Known RBP	4.55	□□□□□ -1.68
SLU7	YDR088C	HBT1	Q07653	1046 aa	Known RBP	4.55	□□□□□ -1.68
SLU7	YDR088C	MSD1	P15179	658 aa	Known RBP	4.54	□□□□□ -1.68
SLU7	YDR088C	NUP82	P40368	713 aa		4.54	□□□□□ -1.68
SLU7	YDR088C	YKE2	P52553	114 aa		4.54	□□□□□ -1.68
SLU7	YDR088C	RNH70	P53331	553 aa		4.54	□□□□□ -1.68
SLU7	YDR088C	MRH1	Q12117	320 aa	Predicted RBP	4.54	□□□□□ -1.68
SLU7	YDR088C	FBP1	P09201	348 aa		4.53	□□□□□ -1.68
SLU7	YDR088C	CTF13	P35203	478 aa		4.53	□□□□□ -1.68
SLU7	YDR088C	YRO2	P38079	344 aa		4.53	□□□□□ -1.68
SLU7	YDR088C	SIT1	P39980	628 aa		4.53	□□□□□ -1.68
SLU7	YDR088C	ELO3	P40319	345 aa		4.53	□□□□□ -1.68
SLU7	YDR088C	SDP1	P40479	209 aa		4.53	□□□□□ -1.68
SLU7	YDR088C	YIL108W	P40483	696 aa	Known RBP	4.53	□□□□□ -1.68
SLU7	YDR088C	BUL2	Q03758	920 aa	Known RBP	4.53	□□□□□ -1.68
SLU7	YDR088C	YDL124W	Q07551	312 aa	Known RBP	4.53	□□□□□ -1.68
SLU7	YDR088C	YPR071W	Q12346	211 aa		4.53	□□□□□ -1.68
SLU7	YDR088C	MET3	P08536	511 aa		4.52	□□□□□ -1.69
SLU7	YDR088C	TUB3	P09734	445 aa	Known RBP	4.52	□□□□□ -1.69
SLU7	YDR088C	YBR238C	P38330	731 aa	Known RBP	4.52	□□□□□ -1.69
SLU7	YDR088C	GGA2	P38817	585 aa	Known RBP	4.52	□□□□□ -1.69
SLU7	YDR088C	HUL4	P40985	892 aa		4.52	□□□□□ -1.69
SLU7	YDR088C	TPO2	P53283	614 aa		4.52	□□□□□ -1.69
SLU7	YDR088C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
SLU7	YDR088C	SUT2	Q12286	268 aa		4.52	□□□□□ -1.69
SLU7	YDR088C	NDJ1	Q12366	352 aa		4.52	□□□□□ -1.69
SLU7	YDR088C	PET10	P36139	283 aa		4.51	□□□□□ -1.69
SLU7	YDR088C	YHL017W	P38745	532 aa		4.51	□□□□□ -1.69
SLU7	YDR088C	TOK1	P40310	691 aa		4.51	□□□□□ -1.69
SLU7	YDR088C	ALG12	P53730	551 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 96.3 ms