RNA–Protein interactions for RNA: YDL223C

HBT1, Transcript of Shmoo tip protein, substrate of Hub1p ubiquitin-like protein, yeast

Gene HBT1, Length 3,141 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HBT1	YDL223C	MCD4	P36051	919 aa		3.88	□□□□□ -1.79
HBT1	YDL223C	PCM1	P38628	557 aa	Known RBP	3.88	□□□□□ -1.79
HBT1	YDL223C	RSC3	Q06639	885 aa		3.88	□□□□□ -1.79
HBT1	YDL223C	RCL1	Q08096	367 aa	Predicted RBP	3.88	□□□□□ -1.79
HBT1	YDL223C	RTC1	Q08281	1341 aa		3.88	□□□□□ -1.79
HBT1	YDL223C	HMG1	P12683	1054 aa		3.87	□□□□□ -1.79
HBT1	YDL223C	APA1	P16550	321 aa	Known RBP	3.87	□□□□□ -1.79
HBT1	YDL223C	RET1	P22276	1149 aa	Known RBP	3.87	□□□□□ -1.79
HBT1	YDL223C	TSL1	P38427	1098 aa	Known RBP	3.87	□□□□□ -1.79
HBT1	YDL223C	DAS1	P47005	663 aa		3.87	□□□□□ -1.79
HBT1	YDL223C	MTC3	P53077	123 aa		3.87	□□□□□ -1.79
HBT1	YDL223C	NBA1	Q08229	501 aa	Known RBP	3.87	□□□□□ -1.79
HBT1	YDL223C	ELG1	Q12050	791 aa		3.87	□□□□□ -1.79
HBT1	YDL223C	TMA7	Q3E764	64 aa	Known RBP	3.87	□□□□□ -1.79
HBT1	YDL223C	TY4B-H	P0C2J7	1802 aa		3.87	□□□□□ -1.79
HBT1	YDL223C	TY4B-J	P47024	1803 aa		3.87	□□□□□ -1.79
HBT1	YDL223C	PDC5	P16467	563 aa	Known RBP	3.87	□□□□□ -1.79
HBT1	YDL223C	YIR007W	P40566	764 aa		3.87	□□□□□ -1.79
HBT1	YDL223C	KIP3	P53086	805 aa	Known RBP	3.87	□□□□□ -1.79
HBT1	YDL223C	LCD1	Q04377	747 aa		3.87	□□□□□ -1.79
HBT1	YDL223C	YDL121C	Q07541	149 aa		3.87	□□□□□ -1.79
HBT1	YDL223C	ENV7	Q12003	364 aa		3.87	□□□□□ -1.79
HBT1	YDL223C	KAR1	P11927	433 aa		3.86	□□□□□ -1.79
HBT1	YDL223C	SST2	P11972	698 aa	Known RBP	3.86	□□□□□ -1.79
HBT1	YDL223C	YJL045W	P47052	634 aa		3.86	□□□□□ -1.79
HBT1	YDL223C	VPS72	Q03388	795 aa		3.86	□□□□□ -1.79
HBT1	YDL223C	YMR074C	Q04773	145 aa		3.86	□□□□□ -1.79
HBT1	YDL223C	TY4B-P	A0A0B7P3V8	1104 aa		3.86	□□□□□ -1.79
HBT1	YDL223C	PRP19	P32523	503 aa	Known RBP	3.86	□□□□□ -1.79
HBT1	YDL223C	EAR1	Q03212	550 aa		3.86	□□□□□ -1.79
HBT1	YDL223C	ATG33	Q06485	197 aa		3.86	□□□□□ -1.79
HBT1	YDL223C	ENT1	Q12518	454 aa		3.86	□□□□□ -1.79
HBT1	YDL223C	TY4A-H	Q6Q5P6	413 aa		3.86	□□□□□ -1.79
HBT1	YDL223C	PWP2	P25635	923 aa	Known RBP	3.86	□□□□□ -1.79
HBT1	YDL223C	PGM2	P37012	569 aa	Known RBP	3.86	□□□□□ -1.79
HBT1	YDL223C	OAF1	P39720	1047 aa	Predicted RBP	3.86	□□□□□ -1.79
HBT1	YDL223C	NOP2	P40991	618 aa	Known RBP	3.86	□□□□□ -1.79
HBT1	YDL223C	YLR257W	Q06146	321 aa	Known RBP	3.86	□□□□□ -1.79
HBT1	YDL223C	CAF16	P43569	289 aa		3.85	□□□□□ -1.79
HBT1	YDL223C	SFB2	P53953	876 aa		3.85	□□□□□ -1.79
HBT1	YDL223C	MET7	Q08645	548 aa		3.85	□□□□□ -1.79
HBT1	YDL223C	GPM1	P00950	247 aa	Known RBP	3.85	□□□□□ -1.79
HBT1	YDL223C	PRO1	P32264	428 aa		3.85	□□□□□ -1.79
HBT1	YDL223C	PEA2	P40091	420 aa		3.85	□□□□□ -1.79
HBT1	YDL223C	HXT16	P47185	567 aa		3.85	□□□□□ -1.79
HBT1	YDL223C	GAL1	P04385	528 aa		3.84	□□□□□ -1.79
HBT1	YDL223C	RPP1A	P05318	106 aa	Predicted RBP	3.84	□□□□□ -1.79
HBT1	YDL223C	TRK1	P12685	1235 aa		3.84	□□□□□ -1.79
HBT1	YDL223C	SNF5	P18480	905 aa		3.84	□□□□□ -1.79
HBT1	YDL223C	YCL002C	P25565	263 aa		3.84	□□□□□ -1.79
HBT1	YDL223C	SER1	P33330	395 aa	Known RBP	3.84	□□□□□ -1.79
HBT1	YDL223C	GPP2	P40106	250 aa	Known RBP	3.84	□□□□□ -1.79
HBT1	YDL223C	MET14	Q02196	202 aa		3.84	□□□□□ -1.79
HBT1	YDL223C	HFD1	Q04458	532 aa		3.84	□□□□□ -1.79
HBT1	YDL223C	AVO1	Q08236	1176 aa		3.84	□□□□□ -1.79
HBT1	YDL223C	YPL260W	Q08977	551 aa		3.84	□□□□□ -1.79
HBT1	YDL223C	BI4	P03879	638 aa		3.84	□□□□□ -1.79
HBT1	YDL223C	GSY1	P23337	708 aa		3.84	□□□□□ -1.79
HBT1	YDL223C	REC104	P33323	182 aa		3.84	□□□□□ -1.79
HBT1	YDL223C	HSP78	P33416	811 aa		3.84	□□□□□ -1.79
HBT1	YDL223C	UGA2	P38067	497 aa		3.84	□□□□□ -1.79
HBT1	YDL223C	BRE2	P43132	505 aa		3.84	□□□□□ -1.79
HBT1	YDL223C	NIT2	P47016	307 aa		3.84	□□□□□ -1.79
HBT1	YDL223C	VPS53	P47061	822 aa		3.84	□□□□□ -1.79
HBT1	YDL223C	ATP25	Q03153	612 aa		3.84	□□□□□ -1.79
HBT1	YDL223C	RPS21A	P0C0V8	87 aa	Known RBP	3.84	□□□□□ -1.8
HBT1	YDL223C	YEF3	P16521	1044 aa	Known RBP	3.84	□□□□□ -1.8
HBT1	YDL223C	MET22	P32179	357 aa		3.84	□□□□□ -1.8
HBT1	YDL223C	EMC3	P36039	253 aa		3.84	□□□□□ -1.8
HBT1	YDL223C	GIC1	P38785	314 aa		3.84	□□□□□ -1.8
HBT1	YDL223C	LEM3	P42838	414 aa		3.84	□□□□□ -1.8
HBT1	YDL223C	UBC9	P50623	157 aa	Predicted RBP	3.84	□□□□□ -1.8
HBT1	YDL223C	ATG16	Q03818	150 aa		3.84	□□□□□ -1.8
HBT1	YDL223C	DOT1	Q04089	582 aa	Known RBP	3.84	□□□□□ -1.8
HBT1	YDL223C	YLR346C	Q06139	101 aa		3.84	□□□□□ -1.8
HBT1	YDL223C	NYV1	Q12255	253 aa		3.84	□□□□□ -1.8
HBT1	YDL223C	ADE8	P04161	214 aa		3.83	□□□□□ -1.8
HBT1	YDL223C	YKL222C	P35995	705 aa		3.83	□□□□□ -1.8
HBT1	YDL223C	CKB2	P38930	258 aa		3.83	□□□□□ -1.8
HBT1	YDL223C	CEM1	P39525	442 aa		3.83	□□□□□ -1.8
HBT1	YDL223C	TAD1	P53065	400 aa		3.83	□□□□□ -1.8
HBT1	YDL223C	LRS4	Q04087	347 aa	Known RBP	3.83	□□□□□ -1.8
HBT1	YDL223C	IMH1	Q06704	911 aa	Known RBP	3.83	□□□□□ -1.8
HBT1	YDL223C	URB1	P34241	1764 aa	Known RBP	3.83	□□□□□ -1.8
HBT1	YDL223C	RRP8	P38961	392 aa	Known RBP	3.83	□□□□□ -1.8
HBT1	YDL223C	YKE2	P52553	114 aa		3.83	□□□□□ -1.8
HBT1	YDL223C	PIP2	P52960	996 aa		3.83	□□□□□ -1.8
HBT1	YDL223C	YGR021W	P53212	290 aa		3.83	□□□□□ -1.8
HBT1	YDL223C	ECM9	Q02202	377 aa		3.83	□□□□□ -1.8
HBT1	YDL223C	GUD1	Q07729	489 aa		3.83	□□□□□ -1.8
HBT1	YDL223C	XYL2	Q07993	356 aa		3.83	□□□□□ -1.8
HBT1	YDL223C	GAS5	Q08193	484 aa		3.83	□□□□□ -1.8
HBT1	YDL223C	TRE2	Q08693	809 aa		3.83	□□□□□ -1.8
HBT1	YDL223C	ATP4	P05626	244 aa		3.82	□□□□□ -1.8
HBT1	YDL223C	GPT2	P36148	743 aa		3.82	□□□□□ -1.8
HBT1	YDL223C	ALG14	P38242	237 aa		3.82	□□□□□ -1.8
HBT1	YDL223C	ATG14	P38270	344 aa		3.82	□□□□□ -1.8
HBT1	YDL223C	MDM38	Q08179	573 aa		3.82	□□□□□ -1.8
HBT1	YDL223C	ACM1	Q08981	209 aa		3.82	□□□□□ -1.8
HBT1	YDL223C	LAP2	Q10740	671 aa		3.82	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms