RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	ERP5	P38819	212 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	CRG1	P38892	291 aa	RIP-Chip data	4.27	□□□□□ -1.73	not detected
VMA1	YDL185W	YIR042C	P40586	236 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	COS6	P53344	381 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	UBP16	Q02863	499 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	VIP1	Q06685	1146 aa	Known RBP	4.27	□□□□□ -1.73
VMA1	YDL185W	SLX4	Q12098	748 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	GPR1	Q12361	961 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	TRM11	Q12463	433 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	YAK1	P14680	807 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	THR1	P17423	357 aa	Known RBP	4.27	□□□□□ -1.73
VMA1	YDL185W	EFB1	P32471	206 aa	Known RBP	4.27	□□□□□ -1.73
VMA1	YDL185W	YEL1	P34225	687 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	VHR2	P40041	505 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	PDS1	P40316	373 aa	Predicted RBP	4.27	□□□□□ -1.73
VMA1	YDL185W	ALG5	P40350	334 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	ATG32	P40458	529 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	EMW1	P42842	904 aa	Known RBP	4.27	□□□□□ -1.73
VMA1	YDL185W	HDA1	P53973	706 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	RPM2	Q02773	1202 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	TSR2	Q06672	205 aa	Known RBP	4.27	□□□□□ -1.73
VMA1	YDL185W	IES3	Q12345	250 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	YPR089W	O13585	888 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	NUC1	P08466	329 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	YBL055C	P34220	418 aa	Predicted RBP	4.27	□□□□□ -1.73
VMA1	YDL185W	BMH2	P34730	273 aa	Known RBP	4.27	□□□□□ -1.73
VMA1	YDL185W	ETP1	P38748	585 aa	Known RBP	4.27	□□□□□ -1.73
VMA1	YDL185W	STN1	P38960	494 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	SHC1	P39000	512 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	IRR1	P40541	1150 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	NUP42	P49686	430 aa	Known RBP	4.27	□□□□□ -1.73
VMA1	YDL185W	RIM8	P53179	542 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	OSH6	Q02201	448 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	LGE1	Q02796	332 aa	Known RBP	4.27	□□□□□ -1.73
VMA1	YDL185W	YDR341C	Q05506	607 aa	Known RBP	4.27	□□□□□ -1.73
VMA1	YDL185W	ZRT2	Q12436	422 aa		4.27	□□□□□ -1.73
VMA1	YDL185W	HIS4	P00815	799 aa	Known RBP	4.26	□□□□□ -1.73
VMA1	YDL185W	THR4	P16120	514 aa	Known RBP	4.26	□□□□□ -1.73
VMA1	YDL185W	ASF1	P32447	279 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	FRD1	P32614	470 aa	Known RBP	4.26	□□□□□ -1.73
VMA1	YDL185W	OCT1	P35999	772 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	YEL023C	P39992	682 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	DAK2	P43550	591 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	STB2	P46679	850 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	SET2	P46995	733 aa	Known RBP	4.26	□□□□□ -1.73
VMA1	YDL185W	YNL193W	P53870	558 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	MGR3	Q04472	501 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	YPQ2	Q06328	317 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	TDA5	Q06417	326 aa	Known RBP	4.26	□□□□□ -1.73
VMA1	YDL185W	PPM2	Q08282	695 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	SEY1	Q99287	776 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	SSA1	P10591	642 aa	Known RBP	4.26	□□□□□ -1.73
VMA1	YDL185W	SSA2	P10592	639 aa	Known RBP	4.26	□□□□□ -1.73
VMA1	YDL185W	MSB1	P21339	1137 aa	Known RBP	4.26	□□□□□ -1.73
VMA1	YDL185W	BUD23	P25627	275 aa	Predicted RBP	4.26	□□□□□ -1.73
VMA1	YDL185W	RPT3	P33298	428 aa	Known RBP	4.26	□□□□□ -1.73
VMA1	YDL185W	UTP11	P34247	250 aa	Predicted RBP	4.26	□□□□□ -1.73
VMA1	YDL185W	BOI1	P38041	980 aa	Known RBP	4.26	□□□□□ -1.73
VMA1	YDL185W	EDS1	P38073	919 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	HSM3	P38348	480 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	VPS29	P38759	282 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	PET100	P38958	111 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	JEM1	P40358	645 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	YFL034W	P43564	1073 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	POL31	P46957	487 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	RPC17	P47076	161 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	KAP114	P53067	1004 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	HST2	P53686	357 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	CPR6	P53691	371 aa	Known RBP	4.26	□□□□□ -1.73
VMA1	YDL185W	CWC15	Q03772	175 aa	Known RBP	4.26	□□□□□ -1.73
VMA1	YDL185W	KAR5	Q04746	504 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	GTB1	Q04924	702 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	ATG26	Q06321	1198 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	IMH1	Q06704	911 aa	Known RBP	4.26	□□□□□ -1.73
VMA1	YDL185W	SPO75	Q07798	868 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	INP54	Q08227	384 aa	Known RBP	4.26	□□□□□ -1.73
VMA1	YDL185W	VIK1	Q12045	647 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	SSF2	Q12153	453 aa	Predicted RBP	4.26	□□□□□ -1.73
VMA1	YDL185W	SPO21	Q12411	609 aa		4.26	□□□□□ -1.73
VMA1	YDL185W	HTZ1	Q12692	134 aa	Known RBP	4.26	□□□□□ -1.73
VMA1	YDL185W	SPT16	P32558	1035 aa	Known RBP	4.25	□□□□□ -1.73
VMA1	YDL185W	YME1	P32795	747 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	MET1	P36150	593 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	RFC3	P38629	340 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	PCI8	P40512	444 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	ATG36	P46983	293 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	FMP33	P46998	180 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	PTK2	P47116	818 aa	Known RBP	4.25	□□□□□ -1.73
VMA1	YDL185W	FCP1	Q03254	732 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	PRP42	Q03776	544 aa	Known RBP	4.25	□□□□□ -1.73
VMA1	YDL185W	MTC5	Q03897	1148 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	DON1	Q05610	365 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	BNI1	P41832	1953 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	POL3	P15436	1097 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	DBP1	P24784	617 aa	Known RBP	4.25	□□□□□ -1.73
VMA1	YDL185W	DSL1	P53847	754 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	ALD6	P54115	500 aa	Known RBP	4.25	□□□□□ -1.73
VMA1	YDL185W	UBP2	Q01476	1272 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	UTP4	Q06679	776 aa	Known RBP	4.25	□□□□□ -1.73
VMA1	YDL185W	BUD7	Q08754	746 aa		4.25	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 90.7 ms