RNA–Protein interactions for RNA: YDL115C

IWR1, Transcript of RNA polymerase II transport factor, conserved from yeast to humans, yeast

Gene IWR1, Length 1,062 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IWR1	YDL115C	MRPS18	P42847	217 aa		5.81	□□□□□ -1.48
IWR1	YDL115C	RKM2	Q03942	479 aa		5.81	□□□□□ -1.48
IWR1	YDL115C	INM2	Q05533	292 aa		5.81	□□□□□ -1.48
IWR1	YDL115C	PUS7	Q08647	676 aa	Known RBP	5.81	□□□□□ -1.48
IWR1	YDL115C	ATE1	P16639	503 aa		5.8	□□□□□ -1.48
IWR1	YDL115C	RET1	P22276	1149 aa	Known RBP	5.8	□□□□□ -1.48
IWR1	YDL115C	SMY1	P32364	656 aa	Known RBP	5.8	□□□□□ -1.48
IWR1	YDL115C	MDL2	P33311	773 aa		5.8	□□□□□ -1.48
IWR1	YDL115C	ADD66	P36040	267 aa		5.8	□□□□□ -1.48
IWR1	YDL115C	SEA4	P38164	1038 aa		5.8	□□□□□ -1.48
IWR1	YDL115C	SNF7	P39929	240 aa	Known RBP	5.8	□□□□□ -1.48
IWR1	YDL115C	YKE2	P52553	114 aa		5.8	□□□□□ -1.48
IWR1	YDL115C	PIP2	P52960	996 aa		5.8	□□□□□ -1.48
IWR1	YDL115C	PIB2	P53191	635 aa		5.8	□□□□□ -1.48
IWR1	YDL115C	TPP1	Q03796	238 aa		5.8	□□□□□ -1.48
IWR1	YDL115C	YLR257W	Q06146	321 aa	Known RBP	5.8	□□□□□ -1.48
IWR1	YDL115C	SPN1	Q06505	410 aa	Predicted RBP	5.8	□□□□□ -1.48
IWR1	YDL115C	TRE1	Q08919	783 aa		5.8	□□□□□ -1.48
IWR1	YDL115C	HEM13	P11353	328 aa	Known RBP	5.79	□□□□□ -1.48
IWR1	YDL115C	TAF13	P11747	167 aa		5.79	□□□□□ -1.48
IWR1	YDL115C	CAF20	P12962	161 aa	Known RBP	5.79	□□□□□ -1.48
IWR1	YDL115C	CLC1	P17891	233 aa		5.79	□□□□□ -1.48
IWR1	YDL115C	PRE9	P23638	258 aa	Known RBP	5.79	□□□□□ -1.48
IWR1	YDL115C	PEP3	P27801	918 aa		5.79	□□□□□ -1.48
IWR1	YDL115C	IMP2'	P32351	346 aa		5.79	□□□□□ -1.48
IWR1	YDL115C	YKU70	P32807	602 aa		5.79	□□□□□ -1.48
IWR1	YDL115C	ERT1	P38140	529 aa		5.79	□□□□□ -1.48
IWR1	YDL115C	CRG1	P38892	291 aa	RIP-Chip data	5.79	□□□□□ -1.48	not detected
IWR1	YDL115C	YIR042C	P40586	236 aa		5.79	□□□□□ -1.48
IWR1	YDL115C	YFH7	P43591	353 aa		5.79	□□□□□ -1.48
IWR1	YDL115C	YJR107W	P47145	328 aa		5.79	□□□□□ -1.48
IWR1	YDL115C	YNR063W	P53749	607 aa		5.79	□□□□□ -1.48
IWR1	YDL115C	IRC4	Q03036	179 aa		5.79	□□□□□ -1.48
IWR1	YDL115C	VPS20	Q04272	221 aa		5.79	□□□□□ -1.48
IWR1	YDL115C	RSA3	Q05942	220 aa	Known RBP	5.79	□□□□□ -1.48
IWR1	YDL115C	CYC8	P14922	966 aa		5.78	□□□□□ -1.48
IWR1	YDL115C	ADP1	P25371	1049 aa		5.78	□□□□□ -1.48
IWR1	YDL115C	PTK1	P36002	662 aa	Predicted RBP	5.78	□□□□□ -1.48
IWR1	YDL115C	YHL017W	P38745	532 aa		5.78	□□□□□ -1.48
IWR1	YDL115C	PEX7	P39108	375 aa		5.78	□□□□□ -1.48
IWR1	YDL115C	RPS26A	P39938	119 aa	Known RBP	5.78	□□□□□ -1.48
IWR1	YDL115C	RPS26B	P39939	119 aa	Known RBP	5.78	□□□□□ -1.48
IWR1	YDL115C	RSM25	P40496	264 aa		5.78	□□□□□ -1.48
IWR1	YDL115C	DJP1	P40564	432 aa		5.78	□□□□□ -1.48
IWR1	YDL115C	HST1	P53685	503 aa		5.78	□□□□□ -1.48
IWR1	YDL115C	MRD1	Q06106	887 aa	Known RBP	5.78	□□□□□ -1.48
IWR1	YDL115C	RRP15	Q06511	250 aa	Predicted RBP	5.78	□□□□□ -1.48
IWR1	YDL115C	ACK1	Q07622	623 aa	Predicted RBP	5.78	□□□□□ -1.48
IWR1	YDL115C	ETT1	Q08421	412 aa	Known RBP	5.78	□□□□□ -1.48
IWR1	YDL115C	HRK1	Q08732	759 aa	Known RBP	5.78	□□□□□ -1.48
IWR1	YDL115C	ROX1	P25042	368 aa		5.77	□□□□□ -1.49
IWR1	YDL115C	MSP1	P28737	362 aa		5.77	□□□□□ -1.49
IWR1	YDL115C	SPL2	P38839	148 aa		5.77	□□□□□ -1.49
IWR1	YDL115C	BDH2	P39713	417 aa		5.77	□□□□□ -1.49
IWR1	YDL115C	BUD6	P41697	788 aa		5.77	□□□□□ -1.49
IWR1	YDL115C	ALG2	P43636	503 aa		5.77	□□□□□ -1.49
IWR1	YDL115C	VPS53	P47061	822 aa		5.77	□□□□□ -1.49
IWR1	YDL115C	AVT1	P47082	602 aa		5.77	□□□□□ -1.49
IWR1	YDL115C	YGL081W	P53156	320 aa		5.77	□□□□□ -1.49
IWR1	YDL115C	PRP42	Q03776	544 aa	Known RBP	5.77	□□□□□ -1.49
IWR1	YDL115C	EST2	Q06163	884 aa		5.77	□□□□□ -1.49
IWR1	YDL115C	LCB1	P25045	558 aa	Known RBP	5.76	□□□□□ -1.49
IWR1	YDL115C	GRX7	P38068	203 aa		5.76	□□□□□ -1.49
IWR1	YDL115C	QNS1	P38795	714 aa	Known RBP	5.76	□□□□□ -1.49
IWR1	YDL115C	VID28	P40547	921 aa		5.76	□□□□□ -1.49
IWR1	YDL115C	NPA3	P47122	385 aa		5.76	□□□□□ -1.49
IWR1	YDL115C	EAF6	P47128	113 aa		5.76	□□□□□ -1.49
IWR1	YDL115C	SSY1	Q03770	852 aa		5.76	□□□□□ -1.49
IWR1	YDL115C	CRF1	Q04930	467 aa		5.76	□□□□□ -1.49
IWR1	YDL115C	WRS1	Q12109	432 aa	Known RBP	5.76	□□□□□ -1.49
IWR1	YDL115C	RRG1	Q12167	365 aa	Predicted RBP	5.76	□□□□□ -1.49
IWR1	YDL115C	LAM4	P38800	1345 aa		5.75	□□□□□ -1.49
IWR1	YDL115C	MATALPHA2	P0CY08	210 aa		5.75	□□□□□ -1.49
IWR1	YDL115C	HMLALPHA2	P0CY09	210 aa		5.75	□□□□□ -1.49
IWR1	YDL115C	ICL1	P28240	557 aa	Predicted RBP	5.75	□□□□□ -1.49
IWR1	YDL115C	MCM2	P29469	868 aa		5.75	□□□□□ -1.49
IWR1	YDL115C	PRO1	P32264	428 aa		5.75	□□□□□ -1.49
IWR1	YDL115C	RPT3	P33298	428 aa	Known RBP	5.75	□□□□□ -1.49
IWR1	YDL115C	HSP78	P33416	811 aa		5.75	□□□□□ -1.49
IWR1	YDL115C	PRX1	P34227	261 aa	Known RBP	5.75	□□□□□ -1.49
IWR1	YDL115C	RER2	P35196	286 aa		5.75	□□□□□ -1.49
IWR1	YDL115C	NMD3	P38861	518 aa	Known RBP	5.75	□□□□□ -1.49
IWR1	YDL115C	RTS1	P38903	757 aa		5.75	□□□□□ -1.49
IWR1	YDL115C	HYR1	P40581	163 aa	Known RBP	5.75	□□□□□ -1.49
IWR1	YDL115C	GSM1	P42950	618 aa		5.75	□□□□□ -1.49
IWR1	YDL115C	CTF18	P49956	741 aa		5.75	□□□□□ -1.49
IWR1	YDL115C	RPS15	Q01855	142 aa	Known RBP	5.75	□□□□□ -1.49
IWR1	YDL115C	YPL260W	Q08977	551 aa		5.75	□□□□□ -1.49
IWR1	YDL115C	PGA3	Q12746	312 aa	Known RBP	5.75	□□□□□ -1.49
IWR1	YDL115C	DFG16	Q99234	619 aa		5.75	□□□□□ -1.49
IWR1	YDL115C	TOP1	P04786	769 aa		5.74	□□□□□ -1.49
IWR1	YDL115C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
IWR1	YDL115C	MSM1	P22438	575 aa		5.74	□□□□□ -1.49
IWR1	YDL115C	POL12	P38121	705 aa	Predicted RBP	5.74	□□□□□ -1.49
IWR1	YDL115C	FYV10	P40492	516 aa		5.74	□□□□□ -1.49
IWR1	YDL115C	IRC24	P40580	263 aa		5.74	□□□□□ -1.49
IWR1	YDL115C	ECL1	P48235	211 aa		5.74	□□□□□ -1.49
IWR1	YDL115C	ORC3	P54790	616 aa		5.74	□□□□□ -1.49
IWR1	YDL115C	SPR28	Q04921	423 aa		5.74	□□□□□ -1.49
IWR1	YDL115C	HDA2	Q06629	674 aa		5.74	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms