RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W ANP1P32629 500 aa3.83□□□□□ -1.8
NUP60YAR002W BMH2P34730 273 aaKnown RBP3.83□□□□□ -1.8
NUP60YAR002W MYO3P36006 1272 aa3.83□□□□□ -1.8
NUP60YAR002W UGA2P38067 497 aa3.83□□□□□ -1.8
NUP60YAR002W RRM3P38766 723 aa3.83□□□□□ -1.8
NUP60YAR002W RTS1P38903 757 aa3.83□□□□□ -1.8
NUP60YAR002W PIC2P40035 300 aa3.83□□□□□ -1.8
NUP60YAR002W PIP2P52960 996 aa3.83□□□□□ -1.8
NUP60YAR002W DSE4P53753 1117 aa3.83□□□□□ -1.8
NUP60YAR002W FAR11P53917 953 aa3.83□□□□□ -1.8
NUP60YAR002W MRD1Q06106 887 aaKnown RBP3.83□□□□□ -1.8
NUP60YAR002W THI72Q08579 599 aa3.83□□□□□ -1.8
NUP60YAR002W YLL054CQ12244 843 aa3.83□□□□□ -1.8
NUP60YAR002W FLO1P32768 1537 aa3.82□□□□□ -1.8
NUP60YAR002W CDC6P09119 513 aa3.82□□□□□ -1.8
NUP60YAR002W RET1P22276 1149 aaKnown RBP3.82□□□□□ -1.8
NUP60YAR002W MAE1P36013 669 aaKnown RBP3.82□□□□□ -1.8
NUP60YAR002W YKT6P36015 200 aaKnown RBP3.82□□□□□ -1.8
NUP60YAR002W MNN4P36044 1178 aa3.82□□□□□ -1.8
NUP60YAR002W EBP2P36049 427 aaKnown RBP3.82□□□□□ -1.8
NUP60YAR002W MAL31P38156 614 aa3.82□□□□□ -1.8
NUP60YAR002W EXO5P38289 585 aa3.82□□□□□ -1.8
NUP60YAR002W MAD1P40957 749 aa3.82□□□□□ -1.8
NUP60YAR002W MSH4P40965 878 aaPredicted RBP3.82□□□□□ -1.8
NUP60YAR002W SBE2P42223 864 aaKnown RBP3.82□□□□□ -1.8
NUP60YAR002W GCV1P48015 400 aa3.82□□□□□ -1.8
NUP60YAR002W YGL140CP53120 1219 aa3.82□□□□□ -1.8
NUP60YAR002W VMS1Q04311 632 aaKnown RBP3.82□□□□□ -1.8
NUP60YAR002W WRS1Q12109 432 aaKnown RBP3.82□□□□□ -1.8
NUP60YAR002W DCS2Q12123 353 aa3.82□□□□□ -1.8
NUP60YAR002W SES1P07284 462 aaKnown RBP3.81□□□□□ -1.8
NUP60YAR002W SEC23P15303 768 aaKnown RBP3.81□□□□□ -1.8
NUP60YAR002W RNR3P21672 869 aaKnown RBP3.81□□□□□ -1.8
NUP60YAR002W VMA4P22203 233 aaKnown RBP3.81□□□□□ -1.8
NUP60YAR002W MAK31P23059 88 aa3.81□□□□□ -1.8
NUP60YAR002W RIT1P23796 513 aa3.81□□□□□ -1.8
NUP60YAR002W MCM4P30665 933 aaKnown RBP3.81□□□□□ -1.8
NUP60YAR002W ERT1P38140 529 aa3.81□□□□□ -1.8
NUP60YAR002W CSM2P40465 213 aa3.81□□□□□ -1.8
NUP60YAR002W ALG2P43636 503 aa3.81□□□□□ -1.8
NUP60YAR002W YPL260WQ08977 551 aa3.81□□□□□ -1.8
NUP60YAR002W GET3Q12154 354 aaKnown RBP3.81□□□□□ -1.8
NUP60YAR002W YOR111WQ99210 232 aa3.81□□□□□ -1.8
NUP60YAR002W RAD61Q99359 647 aa3.81□□□□□ -1.8
NUP60YAR002W RPL22AP05749 121 aaKnown RBP3.81□□□□□ -1.8
NUP60YAR002W VPS1P21576 704 aaKnown RBP3.81□□□□□ -1.8
NUP60YAR002W GSY2P27472 705 aa3.81□□□□□ -1.8
NUP60YAR002W URA1P28272 314 aaPredicted RBP3.81□□□□□ -1.8
NUP60YAR002W PRO3P32263 286 aaKnown RBP3.81□□□□□ -1.8
NUP60YAR002W SRP40P32583 406 aaPredicted RBP3.81□□□□□ -1.8
NUP60YAR002W YKL222CP35995 705 aa3.81□□□□□ -1.8
NUP60YAR002W RXT2P38255 430 aa3.81□□□□□ -1.8
NUP60YAR002W MCX1P38323 520 aaPredicted RBP3.81□□□□□ -1.8
NUP60YAR002W VID27P40157 782 aa3.81□□□□□ -1.8
NUP60YAR002W YFL066CP43538 392 aa3.81□□□□□ -1.8
NUP60YAR002W NRD1P53617 575 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
NUP60YAR002W NSG2P53898 299 aa3.81□□□□□ -1.8
NUP60YAR002W GDE1Q02979 1223 aa3.81□□□□□ -1.8
NUP60YAR002W PRP42Q03776 544 aaKnown RBP3.81□□□□□ -1.8
NUP60YAR002W MYO5Q04439 1219 aaKnown RBP3.81□□□□□ -1.8
NUP60YAR002W ESC2Q06340 456 aa3.81□□□□□ -1.8
NUP60YAR002W PIN2Q12057 282 aa3.81□□□□□ -1.8
NUP60YAR002W GRX6Q12438 231 aa3.81□□□□□ -1.8
NUP60YAR002W HKR1P41809 1802 aa3.8□□□□□ -1.8
NUP60YAR002W REI1P38344 393 aaPredicted RBP3.8□□□□□ -1.8
NUP60YAR002W NOC2P39744 710 aaKnown RBP3.8□□□□□ -1.8
NUP60YAR002W PCI8P40512 444 aa3.8□□□□□ -1.8
NUP60YAR002W TFG2P41896 400 aaPredicted RBP3.8□□□□□ -1.8
NUP60YAR002W GSM1P42950 618 aa3.8□□□□□ -1.8
NUP60YAR002W CUE3P53137 624 aaKnown RBP3.8□□□□□ -1.8
NUP60YAR002W RPT6Q01939 405 aaKnown RBP3.8□□□□□ -1.8
NUP60YAR002W TIM50Q02776 476 aa3.8□□□□□ -1.8
NUP60YAR002W TDA6Q06466 467 aa3.8□□□□□ -1.8
NUP60YAR002W MRL1Q06815 381 aa3.8□□□□□ -1.8
NUP60YAR002W GAS5Q08193 484 aa3.8□□□□□ -1.8
NUP60YAR002W RTT10Q08924 1013 aa3.8□□□□□ -1.8
NUP60YAR002W CEX1Q12453 761 aa3.8□□□□□ -1.8
NUP60YAR002W MET6P05694 767 aaKnown RBP3.79□□□□□ -1.8
NUP60YAR002W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8 RIP-Chip
NUP60YAR002W GCR1P07261 785 aa3.79□□□□□ -1.8
NUP60YAR002W TY1A-LR4P0C2I8 440 aaKnown RBP3.79□□□□□ -1.8
NUP60YAR002W TY1A-DR6P0CX70 440 aa3.79□□□□□ -1.8
NUP60YAR002W TY1A-ER1P0CX71 440 aa3.79□□□□□ -1.8
NUP60YAR002W TY1A-LR2P0CX72 440 aa3.79□□□□□ -1.8
NUP60YAR002W TY1A-PLP0CX73 440 aa3.79□□□□□ -1.8
NUP60YAR002W TY1A-JR1P0CX74 440 aa3.79□□□□□ -1.8
NUP60YAR002W TY1A-LR3P0CX75 440 aa3.79□□□□□ -1.8
NUP60YAR002W TY1A-ML2P0CX76 440 aa3.79□□□□□ -1.8
NUP60YAR002W ERS1P17261 260 aa3.79□□□□□ -1.8
NUP60YAR002W MCM3P24279 971 aaKnown RBP3.79□□□□□ -1.8
NUP60YAR002W RPS7AP26786 190 aaKnown RBP3.79□□□□□ -1.8
NUP60YAR002W RAD27P26793 382 aa3.79□□□□□ -1.8
NUP60YAR002W SFA1P32771 386 aa3.79□□□□□ -1.8
NUP60YAR002W RDH54P38086 958 aa3.79□□□□□ -1.8
NUP60YAR002W ATG14P38270 344 aa3.79□□□□□ -1.8
NUP60YAR002W NEM1P38757 446 aa3.79□□□□□ -1.8
NUP60YAR002W VPS8P39702 1274 aa3.79□□□□□ -1.8
NUP60YAR002W SLS1P42900 643 aa3.79□□□□□ -1.8
NUP60YAR002W VPS16Q03308 798 aa3.79□□□□□ -1.8
NUP60YAR002W WAR1Q03631 944 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms