RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 LSG1Q9H089 658 aaKnown RBP7.84□□□□□ -1.16
LMO3-235ENST00000616247 ZSWIM4Q9H7M6 989 aa7.84□□□□□ -1.16
LMO3-235ENST00000616247 LRRC7Q96NW7 1537 aa7.83□□□□□ -1.16
LMO3-235ENST00000616247 NPHP3Q7Z494 1330 aa7.83□□□□□ -1.16
LMO3-235ENST00000616247 HDGFL1Q5TGJ6 251 aa7.83□□□□□ -1.16
LMO3-235ENST00000616247 KIF1BPQ96EK5 621 aa7.83□□□□□ -1.16
LMO3-235ENST00000616247 TTC14Q96N46 770 aa7.83□□□□□ -1.16
LMO3-235ENST00000616247 FSD1Q9BTV5 496 aa7.83□□□□□ -1.16
LMO3-235ENST00000616247 FTOQ9C0B1 505 aaKnown RBP eCLIP7.83□□□□□ -1.16
LMO3-235ENST00000616247 CCDC8Q9H0W5 538 aaPredicted RBP7.83□□□□□ -1.16
LMO3-235ENST00000616247 MYOM2P54296 1465 aa7.83□□□□□ -1.16
LMO3-235ENST00000616247 SEC31AO94979 1220 aaKnown RBP7.83□□□□□ -1.16
LMO3-235ENST00000616247 RAPGEF3O95398 923 aa7.83□□□□□ -1.16
LMO3-235ENST00000616247 MLECQ14165 292 aa7.83□□□□□ -1.16
LMO3-235ENST00000616247 PTPN21Q16825 1174 aa7.83□□□□□ -1.16
LMO3-235ENST00000616247 KRBA2Q6ZNG9 492 aa7.83□□□□□ -1.16
LMO3-235ENST00000616247 CCAR1Q8IX12 1150 aaKnown RBP7.83□□□□□ -1.16
LMO3-235ENST00000616247 BRF1Q92994 677 aa7.83□□□□□ -1.16
LMO3-235ENST00000616247 GPATCH3Q96I76 525 aa7.83□□□□□ -1.16
LMO3-235ENST00000616247 FAM227BQ96M60 508 aa7.83□□□□□ -1.16
LMO3-235ENST00000616247 EPC1Q9H2F5 836 aa7.83□□□□□ -1.16
LMO3-235ENST00000616247 BOLA2Q9H3K6 86 aa7.83□□□□□ -1.16
LMO3-235ENST00000616247 CLSTN2Q9H4D0 955 aa7.83□□□□□ -1.16
LMO3-235ENST00000616247 PA2G4Q9UQ80 394 aaKnown RBP7.83□□□□□ -1.16
LMO3-235ENST00000616247 SFPQP23246 707 aaKnown RBP eCLIP7.82□□□□□ -1.16
LMO3-235ENST00000616247 AMPHP49418 695 aa7.82□□□□□ -1.16
LMO3-235ENST00000616247 GYS2P54840 703 aa7.82□□□□□ -1.16
LMO3-235ENST00000616247 GPS2Q13227 327 aa7.82□□□□□ -1.16
LMO3-235ENST00000616247 TAF7Q15545 349 aaPredicted RBP7.82□□□□□ -1.16
LMO3-235ENST00000616247 PAXIP1Q6ZW49 1069 aaPredicted RBP7.82□□□□□ -1.16
LMO3-235ENST00000616247 AACSQ86V21 672 aa7.82□□□□□ -1.16
LMO3-235ENST00000616247 PHAXQ9H814 394 aaKnown RBP7.82□□□□□ -1.16
LMO3-235ENST00000616247 C9orf78Q9NZ63 289 aaPredicted RBP7.82□□□□□ -1.16
LMO3-235ENST00000616247 LMAN1P49257 510 aa7.82□□□□□ -1.16
LMO3-235ENST00000616247 HSP90AA4PQ58FG1 418 aa7.82□□□□□ -1.16
LMO3-235ENST00000616247 VPS53Q5VIR6 699 aa7.82□□□□□ -1.16
LMO3-235ENST00000616247 NUTM2GQ5VZR2 741 aa7.82□□□□□ -1.16
LMO3-235ENST00000616247 CEP57L1Q8IYX8 460 aa7.82□□□□□ -1.16
LMO3-235ENST00000616247 LRRN4CLQ8ND94 238 aa7.82□□□□□ -1.16
LMO3-235ENST00000616247 GLRX3O76003 335 aaKnown RBP7.82□□□□□ -1.16
LMO3-235ENST00000616247 PSMA5P28066 241 aa7.82□□□□□ -1.16
LMO3-235ENST00000616247 CLCN6P51797 869 aa7.82□□□□□ -1.16
LMO3-235ENST00000616247 RNF20Q5VTR2 975 aa7.82□□□□□ -1.16
LMO3-235ENST00000616247 FBXO31Q5XUX0 539 aaPredicted RBP7.82□□□□□ -1.16
LMO3-235ENST00000616247 CREB3L3Q68CJ9 461 aa7.82□□□□□ -1.16
LMO3-235ENST00000616247 PLA2G4DQ86XP0 818 aa7.82□□□□□ -1.16
LMO3-235ENST00000616247 TDRD7Q8NHU6 1098 aaKnown RBP7.82□□□□□ -1.16
LMO3-235ENST00000616247 USP44Q9H0E7 712 aa7.82□□□□□ -1.16
LMO3-235ENST00000616247 ADGRB2O60241 1585 aa7.82□□□□□ -1.16
LMO3-235ENST00000616247 SOS1Q07889 1333 aaPredicted RBP7.81□□□□□ -1.16
LMO3-235ENST00000616247 KIF24Q5T7B8 1368 aa7.81□□□□□ -1.16
LMO3-235ENST00000616247 NBPF7P0C2Y1 421 aaPredicted RBP7.81□□□□□ -1.16
LMO3-235ENST00000616247 TPM4P67936 248 aa7.81□□□□□ -1.16
LMO3-235ENST00000616247 COL9A3Q14050 684 aaPredicted RBP7.81□□□□□ -1.16
LMO3-235ENST00000616247 STX1AQ16623 288 aa7.81□□□□□ -1.16
LMO3-235ENST00000616247 MTHFSDQ2M296 383 aaKnown RBP7.81□□□□□ -1.16
LMO3-235ENST00000616247 PDILTQ8N807 584 aa7.81□□□□□ -1.16
LMO3-235ENST00000616247 FSIP1Q8NA03 581 aa7.81□□□□□ -1.16
LMO3-235ENST00000616247 CCDC191Q8NCU4 936 aa7.81□□□□□ -1.16
LMO3-235ENST00000616247 NUDT16Q96DE0 195 aaKnown RBP7.81□□□□□ -1.16
LMO3-235ENST00000616247 PGBD1Q96JS3 809 aa7.81□□□□□ -1.16
LMO3-235ENST00000616247 IFNKQ9P0W0 207 aa7.81□□□□□ -1.16
LMO3-235ENST00000616247 RSPH14Q9UHP6 348 aa7.81□□□□□ -1.16
LMO3-235ENST00000616247 YTHDC2Q9H6S0 1430 aaKnown RBP7.81□□□□□ -1.16
LMO3-235ENST00000616247 FANCAO15360 1455 aa7.81□□□□□ -1.16
LMO3-235ENST00000616247 PNPLA6Q8IY17 1366 aa7.81□□□□□ -1.16
LMO3-235ENST00000616247 CAPN2P17655 700 aa7.81□□□□□ -1.16
LMO3-235ENST00000616247 CCT2P78371 535 aaKnown RBP7.81□□□□□ -1.16
LMO3-235ENST00000616247 SYCP1Q15431 976 aa7.81□□□□□ -1.16
LMO3-235ENST00000616247 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.81□□□□□ -1.16
LMO3-235ENST00000616247 CARD6Q9BX69 1037 aa7.81□□□□□ -1.16
LMO3-235ENST00000616247 STAP2Q9UGK3 403 aa7.81□□□□□ -1.16
LMO3-235ENST00000616247 TULP4Q9NRJ4 1543 aa7.81□□□□□ -1.16
LMO3-235ENST00000616247 NEMFO60524 1076 aa7.8□□□□□ -1.16
LMO3-235ENST00000616247 LMOD1P29536 600 aaPredicted RBP7.8□□□□□ -1.16
LMO3-235ENST00000616247 TOMM22Q9NS69 142 aa7.8□□□□□ -1.16
LMO3-235ENST00000616247 ANO10Q9NW15 660 aa7.8□□□□□ -1.16
LMO3-235ENST00000616247 ARHGEF40Q8TER5 1519 aa7.8□□□□□ -1.16
LMO3-235ENST00000616247 PNMA6AP0CW24 399 aaPredicted RBP7.8□□□□□ -1.16
LMO3-235ENST00000616247 RAD51AP2Q09MP3 1159 aa7.8□□□□□ -1.16
LMO3-235ENST00000616247 NMIQ13287 307 aaPredicted RBP7.8□□□□□ -1.16
LMO3-235ENST00000616247 NAT10Q9H0A0 1025 aaKnown RBP7.8□□□□□ -1.16
LMO3-235ENST00000616247 ZNF446Q9NWS9 450 aa7.8□□□□□ -1.16
LMO3-235ENST00000616247 CFAP45Q9UL16 551 aa7.8□□□□□ -1.16
LMO3-235ENST00000616247 ATXN8OSP0DMR3 200 aa7.8□□□□□ -1.16
LMO3-235ENST00000616247 ST5P78524 1137 aa7.8□□□□□ -1.16
LMO3-235ENST00000616247 GOLGA8FQ08AF8 430 aa7.8□□□□□ -1.16
LMO3-235ENST00000616247 GOLGA8DPQ0D2H9 430 aa7.8□□□□□ -1.16
LMO3-235ENST00000616247 NPATQ14207 1427 aa7.8□□□□□ -1.16
LMO3-235ENST00000616247 STK11IPQ8N1F8 1099 aa7.8□□□□□ -1.16
LMO3-235ENST00000616247 PI4K2BQ8TCG2 481 aa7.8□□□□□ -1.16
LMO3-235ENST00000616247 DNAJC5Q9H3Z4 198 aa7.8□□□□□ -1.16
LMO3-235ENST00000616247 ECHDC1Q9NTX5 307 aa7.8□□□□□ -1.16
LMO3-235ENST00000616247 COL3A1P02461 1466 aaPredicted RBP7.8□□□□□ -1.16
LMO3-235ENST00000616247 QRICH2Q9H0J4 1663 aa7.79□□□□□ -1.16
LMO3-235ENST00000616247 ZFYVE9O95405 1425 aa7.79□□□□□ -1.16
LMO3-235ENST00000616247 PI4KAP2A4QPH2 592 aa7.79□□□□□ -1.16
LMO3-235ENST00000616247 SERPINC1P01008 464 aa7.79□□□□□ -1.16
LMO3-235ENST00000616247 AIMP1Q12904 312 aaKnown RBP7.79□□□□□ -1.16
LMO3-235ENST00000616247 TTLL5Q6EMB2 1281 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms