RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 BMS1Q14692 1282 aaKnown RBP7.46□□□□□ -1.22
SMAD4-212ENST00000591126 JMYQ8N9B5 988 aa7.46□□□□□ -1.22
SMAD4-212ENST00000591126 C22orf23Q9BZE7 217 aa7.46□□□□□ -1.22
SMAD4-212ENST00000591126 RAB34Q9BZG1 259 aa7.46□□□□□ -1.22
SMAD4-212ENST00000591126 LOC102724428A0A0B4J2F2 783 aa7.46□□□□□ -1.22
SMAD4-212ENST00000591126 FAM83GA6ND36 823 aa7.46□□□□□ -1.22
SMAD4-212ENST00000591126 SIK1P57059 783 aa7.46□□□□□ -1.22
SMAD4-212ENST00000591126 POLKQ9UBT6 870 aa7.46□□□□□ -1.22
SMAD4-212ENST00000591126 FBXO3Q9UK99 471 aa7.46□□□□□ -1.22
SMAD4-212ENST00000591126 NSFL1CQ9UNZ2 370 aaKnown RBP7.46□□□□□ -1.22
SMAD4-212ENST00000591126 CRB1P82279 1406 aa7.45□□□□□ -1.22
SMAD4-212ENST00000591126 CDC45O75419 566 aa7.45□□□□□ -1.22
SMAD4-212ENST00000591126 FLIIQ13045 1269 aa7.45□□□□□ -1.22
SMAD4-212ENST00000591126 TPD52L1Q16890 204 aaPredicted RBP7.45□□□□□ -1.22
SMAD4-212ENST00000591126 WDR78Q5VTH9 848 aa7.45□□□□□ -1.22
SMAD4-212ENST00000591126 MCM10Q7L590 875 aa7.45□□□□□ -1.22
SMAD4-212ENST00000591126 AACSQ86V21 672 aa7.45□□□□□ -1.22
SMAD4-212ENST00000591126 TMTC2Q8N394 836 aa7.45□□□□□ -1.22
SMAD4-212ENST00000591126 A0A1W2PP64 1363 aa7.45□□□□□ -1.22
SMAD4-212ENST00000591126 TPM3P06753 285 aa7.45□□□□□ -1.22
SMAD4-212ENST00000591126 NPR1P16066 1061 aa7.45□□□□□ -1.22
SMAD4-212ENST00000591126 HOXD10P28358 340 aa7.45□□□□□ -1.22
SMAD4-212ENST00000591126 FKBP4Q02790 459 aaKnown RBP eCLIP7.45□□□□□ -1.22
SMAD4-212ENST00000591126 TTLL6Q8N841 843 aa7.45□□□□□ -1.22
SMAD4-212ENST00000591126 PARD3Q8TEW0 1356 aa7.45□□□□□ -1.22
SMAD4-212ENST00000591126 PLEKHG2Q9H7P9 1386 aa7.45□□□□□ -1.22
SMAD4-212ENST00000591126 PPIP5K2O43314 1243 aa7.45□□□□□ -1.22
SMAD4-212ENST00000591126 IDH1O75874 414 aaKnown RBP7.45□□□□□ -1.22
SMAD4-212ENST00000591126 TRIM44Q96DX7 344 aaPredicted RBP7.45□□□□□ -1.22
SMAD4-212ENST00000591126 GLT8D2Q9H1C3 349 aa7.45□□□□□ -1.22
SMAD4-212ENST00000591126 MAP3K2Q9Y2U5 619 aa7.45□□□□□ -1.22
SMAD4-212ENST00000591126 PRDM15P57071 1507 aaPredicted RBP7.45□□□□□ -1.22
SMAD4-212ENST00000591126 METP08581 1390 aa7.45□□□□□ -1.22
SMAD4-212ENST00000591126 KDM4FA0A1W2PPD8 638 aa7.44□□□□□ -1.22
SMAD4-212ENST00000591126 NAP1L4Q99733 375 aaKnown RBP7.44□□□□□ -1.22
SMAD4-212ENST00000591126 NAPBQ9H115 298 aa7.44□□□□□ -1.22
SMAD4-212ENST00000591126 RNF216Q9NWF9 866 aaPredicted RBP7.44□□□□□ -1.22
SMAD4-212ENST00000591126 DLGAP5Q15398 846 aa7.44□□□□□ -1.22
SMAD4-212ENST00000591126 CRBNQ96SW2 442 aa7.44□□□□□ -1.22
SMAD4-212ENST00000591126 PHAXQ9H814 394 aaKnown RBP7.44□□□□□ -1.22
SMAD4-212ENST00000591126 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.44□□□□□ -1.22
SMAD4-212ENST00000591126 LAMC1P11047 1609 aa7.44□□□□□ -1.22
SMAD4-212ENST00000591126 GCC2Q8IWJ2 1684 aa7.44□□□□□ -1.22
SMAD4-212ENST00000591126 ERVV-1B6SEH8 477 aa7.44□□□□□ -1.22
SMAD4-212ENST00000591126 CCNA1P78396 465 aa7.44□□□□□ -1.22
SMAD4-212ENST00000591126 CTCFLQ8NI51 663 aaPredicted RBP7.44□□□□□ -1.22
SMAD4-212ENST00000591126 XAGE3Q8WTP9 111 aa7.44□□□□□ -1.22
SMAD4-212ENST00000591126 USP6P35125 1406 aa7.44□□□□□ -1.22
SMAD4-212ENST00000591126 NCAPD2Q15021 1401 aa7.44□□□□□ -1.22
SMAD4-212ENST00000591126 LDHBP07195 334 aaKnown RBP7.44□□□□□ -1.22
SMAD4-212ENST00000591126 PHKG2P15735 406 aa7.44□□□□□ -1.22
SMAD4-212ENST00000591126 RDXP35241 583 aaKnown RBP7.44□□□□□ -1.22
SMAD4-212ENST00000591126 IQSEC2Q5JU85 1478 aa7.44□□□□□ -1.22
SMAD4-212ENST00000591126 C1orf167Q5SNV9 1468 aa7.44□□□□□ -1.22
SMAD4-212ENST00000591126 RPS6KA4O75676 772 aa7.43□□□□□ -1.22
SMAD4-212ENST00000591126 RRP1P56182 461 aaKnown RBP7.43□□□□□ -1.22
SMAD4-212ENST00000591126 NCBP1Q09161 790 aaKnown RBP7.43□□□□□ -1.22
SMAD4-212ENST00000591126 COPS6Q7L5N1 327 aa7.43□□□□□ -1.22
SMAD4-212ENST00000591126 C2orf69Q8N8R5 385 aa7.43□□□□□ -1.22
SMAD4-212ENST00000591126 ARHGEF10LQ9HCE6 1279 aa7.43□□□□□ -1.22
SMAD4-212ENST00000591126 MROH5Q6ZUA9 1318 aa7.43□□□□□ -1.22
SMAD4-212ENST00000591126 ECE1P42892 770 aa7.43□□□□□ -1.22
SMAD4-212ENST00000591126 BAG4O95429 457 aaKnown RBP7.43□□□□□ -1.22
SMAD4-212ENST00000591126 RC3H1Q5TC82 1133 aaKnown RBP7.43□□□□□ -1.22
SMAD4-212ENST00000591126 MASTLQ96GX5 879 aa7.43□□□□□ -1.22
SMAD4-212ENST00000591126 CNNM2Q9H8M5 875 aa7.43□□□□□ -1.22
SMAD4-212ENST00000591126 LEMD3Q9Y2U8 911 aa7.43□□□□□ -1.22
SMAD4-212ENST00000591126 UFL1O94874 794 aa7.43□□□□□ -1.22
SMAD4-212ENST00000591126 ATP2B3Q16720 1220 aa7.43□□□□□ -1.22
SMAD4-212ENST00000591126 CCDC174Q6PII3 467 aa7.43□□□□□ -1.22
SMAD4-212ENST00000591126 KIF20AO95235 890 aa7.42□□□□□ -1.22
SMAD4-212ENST00000591126 EAPPQ56P03 285 aaPredicted RBP7.42□□□□□ -1.22
SMAD4-212ENST00000591126 IQGAP3Q86VI3 1631 aa7.42□□□□□ -1.22
SMAD4-212ENST00000591126 PTMAP06454 111 aaKnown RBP7.42□□□□□ -1.22
SMAD4-212ENST00000591126 VEZTQ9HBM0 779 aa7.42□□□□□ -1.22
SMAD4-212ENST00000591126 COG6Q9Y2V7 657 aa7.42□□□□□ -1.22
SMAD4-212ENST00000591126 ROBO2Q9HCK4 1378 aa7.42□□□□□ -1.22
SMAD4-212ENST00000591126 CDK12Q9NYV4 1490 aaPredicted RBP7.42□□□□□ -1.22
SMAD4-212ENST00000591126 SEMA3EO15041 775 aa7.42□□□□□ -1.22
SMAD4-212ENST00000591126 LPXNO60711 386 aa7.42□□□□□ -1.22
SMAD4-212ENST00000591126 NOB1Q9ULX3 412 aaKnown RBP7.42□□□□□ -1.22
SMAD4-212ENST00000591126 CEP131Q9UPN4 1083 aa7.42□□□□□ -1.22
SMAD4-212ENST00000591126 SPDYE4A6NLX3 237 aa7.42□□□□□ -1.22
SMAD4-212ENST00000591126 GRM8O00222 908 aa7.42□□□□□ -1.22
SMAD4-212ENST00000591126 DKC1O60832 514 aaKnown RBP eCLIP7.42□□□□□ -1.22
SMAD4-212ENST00000591126 MAP4K4O95819 1239 aaPredicted RBP7.42□□□□□ -1.22
SMAD4-212ENST00000591126 CCDC96Q2M329 555 aa7.42□□□□□ -1.22
SMAD4-212ENST00000591126 MCTP2Q6DN12 878 aa7.42□□□□□ -1.22
SMAD4-212ENST00000591126 NAA16Q6N069 864 aaPredicted RBP7.42□□□□□ -1.22
SMAD4-212ENST00000591126 NOL8Q76FK4 1167 aaKnown RBP7.42□□□□□ -1.22
SMAD4-212ENST00000591126 TAOK3Q9H2K8 898 aa7.42□□□□□ -1.22
SMAD4-212ENST00000591126 DLC1Q96QB1 1528 aa7.42□□□□□ -1.22
SMAD4-212ENST00000591126 TULP4Q9NRJ4 1543 aa7.42□□□□□ -1.22
SMAD4-212ENST00000591126 PRKAG2Q9UGJ0 569 aa7.41□□□□□ -1.22
SMAD4-212ENST00000591126 HIBADHP31937 336 aaKnown RBP7.41□□□□□ -1.22
SMAD4-212ENST00000591126 SLC4A3P48751 1232 aa7.41□□□□□ -1.22
SMAD4-212ENST00000591126 RRP12Q5JTH9 1297 aaKnown RBP7.41□□□□□ -1.22
SMAD4-212ENST00000591126 ZSCAN31Q96LW9 406 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-212ENST00000591126 ARID3AQ99856 593 aa7.41□□□□□ -1.22
SMAD4-212ENST00000591126 PYM1Q9BRP8 204 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms