RNA–Protein interactions for RNA: ENST00000583805.1

CRLF3-205, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-205ENST00000583805 CNBD1Q8NA66 436 aa11.5□□□□□ -0.57
CRLF3-205ENST00000583805 SETDB2Q96T68 719 aa11.5□□□□□ -0.57
CRLF3-205ENST00000583805 TBC1D2BQ9UPU7 963 aa11.5□□□□□ -0.57
CRLF3-205ENST00000583805 FSTL1Q12841 308 aa11.49□□□□□ -0.57
CRLF3-205ENST00000583805 MCM10Q7L590 875 aa11.49□□□□□ -0.57
CRLF3-205ENST00000583805 PNISRQ8TF01 805 aaKnown RBP11.49□□□□□ -0.57
CRLF3-205ENST00000583805 LARP6Q9BRS8 491 aaKnown RBP11.49□□□□□ -0.57
CRLF3-205ENST00000583805 NMRK2Q9NPI5 230 aa11.49□□□□□ -0.57
CRLF3-205ENST00000583805 LAMB2P55268 1798 aa11.49□□□□□ -0.57
CRLF3-205ENST00000583805 A1BGP04217 495 aa11.48□□□□□ -0.57
CRLF3-205ENST00000583805 TAF7Q15545 349 aaPredicted RBP11.48□□□□□ -0.57
CRLF3-205ENST00000583805 SOGA3Q5TF21 947 aa11.48□□□□□ -0.57
CRLF3-205ENST00000583805 CNKSR1Q969H4 720 aa11.48□□□□□ -0.57
CRLF3-205ENST00000583805 LTBP3Q9NS15 1303 aa11.48□□□□□ -0.57
CRLF3-205ENST00000583805 MAPK8IP3Q9UPT6 1336 aa11.47□□□□□ -0.57
CRLF3-205ENST00000583805 KCNQ3O43525 872 aa11.47□□□□□ -0.57
CRLF3-205ENST00000583805 RASSF7Q02833 373 aa11.47□□□□□ -0.57
CRLF3-205ENST00000583805 STYK1Q6J9G0 422 aa11.47□□□□□ -0.57
CRLF3-205ENST00000583805 IFNL1Q8IU54 200 aa11.47□□□□□ -0.57
CRLF3-205ENST00000583805 USP16Q9Y5T5 823 aa11.47□□□□□ -0.57
CRLF3-205ENST00000583805 GLTPD2A6NH11 291 aa11.46□□□□□ -0.57
CRLF3-205ENST00000583805 ZMYND10O75800 440 aa11.46□□□□□ -0.57
CRLF3-205ENST00000583805 ZNF622Q969S3 477 aaKnown RBP eCLIP11.46□□□□□ -0.57
CRLF3-205ENST00000583805 MASTLQ96GX5 879 aa11.46□□□□□ -0.57
CRLF3-205ENST00000583805 RIC1Q4ADV7 1423 aa11.45□□□□□ -0.58
CRLF3-205ENST00000583805 IBTKQ9P2D0 1353 aaPredicted RBP11.45□□□□□ -0.58
CRLF3-205ENST00000583805 NFKBIEO00221 500 aa11.45□□□□□ -0.58
CRLF3-205ENST00000583805 SRGNP10124 158 aa11.45□□□□□ -0.58
CRLF3-205ENST00000583805 PRKAR2AP13861 404 aaKnown RBP11.45□□□□□ -0.58
CRLF3-205ENST00000583805 DCTN1Q14203 1278 aa11.45□□□□□ -0.58
CRLF3-205ENST00000583805 RALBP1Q15311 655 aa11.45□□□□□ -0.58
CRLF3-205ENST00000583805 NBPF5PQ86XG9 351 aaPredicted RBP11.45□□□□□ -0.58
CRLF3-205ENST00000583805 SMC1BQ8NDV3 1235 aa11.45□□□□□ -0.58
CRLF3-205ENST00000583805 PLEKHF1Q96S99 279 aa11.45□□□□□ -0.58
CRLF3-205ENST00000583805 TAOK3Q9H2K8 898 aa11.45□□□□□ -0.58
CRLF3-205ENST00000583805 ERBB4Q15303 1308 aa11.44□□□□□ -0.58
CRLF3-205ENST00000583805 NFE2L2Q16236 605 aa11.44□□□□□ -0.58
CRLF3-205ENST00000583805 DPY19L2Q6NUT2 758 aa11.44□□□□□ -0.58
CRLF3-205ENST00000583805 TPTE2Q6XPS3 522 aa11.44□□□□□ -0.58
CRLF3-205ENST00000583805 RRAGCQ9HB90 399 aa11.44□□□□□ -0.58
CRLF3-205ENST00000583805 ARIH1Q9Y4X5 557 aaPredicted RBP11.44□□□□□ -0.58
CRLF3-205ENST00000583805 PRAMEF22A3QJZ6 481 aa11.43□□□□□ -0.58
CRLF3-205ENST00000583805 C21orf2O43822 256 aa11.43□□□□□ -0.58
CRLF3-205ENST00000583805 VEGFAP15692 232 aaPredicted RBP11.43□□□□□ -0.58
CRLF3-205ENST00000583805 GOLGA2Q08379 1002 aa11.43□□□□□ -0.58
CRLF3-205ENST00000583805 PRPF40BQ6NWY9 871 aaKnown RBP11.43□□□□□ -0.58
CRLF3-205ENST00000583805 DDX27Q96GQ7 796 aaKnown RBP11.43□□□□□ -0.58
CRLF3-205ENST00000583805 NYXQ9GZU5 481 aa11.43□□□□□ -0.58
CRLF3-205ENST00000583805 NIP7Q9Y221 180 aaKnown RBP eCLIP11.43□□□□□ -0.58
CRLF3-205ENST00000583805 TRPM7Q96QT4 1865 aa11.42□□□□□ -0.58
CRLF3-205ENST00000583805 CACNA1FO60840 1977 aa11.42□□□□□ -0.58
CRLF3-205ENST00000583805 KLRG2A4D1S0 409 aaPredicted RBP11.42□□□□□ -0.58
CRLF3-205ENST00000583805 NBPF26B4DH59 902 aa11.42□□□□□ -0.58
CRLF3-205ENST00000583805 ERVV-1B6SEH8 477 aa11.42□□□□□ -0.58
CRLF3-205ENST00000583805 MAP3K13O43283 966 aa11.42□□□□□ -0.58
CRLF3-205ENST00000583805 NPR1P16066 1061 aa11.42□□□□□ -0.58
CRLF3-205ENST00000583805 PIP4K2AP48426 406 aaPredicted RBP11.42□□□□□ -0.58
CRLF3-205ENST00000583805 LMOD3Q0VAK6 560 aa11.42□□□□□ -0.58
CRLF3-205ENST00000583805 ERFEQ4G0M1 354 aa11.42□□□□□ -0.58
CRLF3-205ENST00000583805 NBPF10Q6P3W6 841 aaKnown RBP11.42□□□□□ -0.58
CRLF3-205ENST00000583805 KIF6Q6ZMV9 814 aa11.42□□□□□ -0.58
CRLF3-205ENST00000583805 NBPF15Q8N660 670 aa11.42□□□□□ -0.58
CRLF3-205ENST00000583805 BABAM1Q9NWV8 329 aa11.42□□□□□ -0.58
CRLF3-205ENST00000583805 ALDH1B1P30837 517 aa11.41□□□□□ -0.58
CRLF3-205ENST00000583805 PRELPP51888 382 aa11.41□□□□□ -0.58
CRLF3-205ENST00000583805 EIF4A1P60842 406 aaKnown RBP11.41□□□□□ -0.58
CRLF3-205ENST00000583805 MFSD10Q14728 455 aa11.41□□□□□ -0.58
CRLF3-205ENST00000583805 CCDC93Q567U6 631 aa11.41□□□□□ -0.58
CRLF3-205ENST00000583805 KIF12Q96FN5 646 aa11.41□□□□□ -0.58
CRLF3-205ENST00000583805 ADAMTSL1Q8N6G6 1762 aa11.41□□□□□ -0.58
CRLF3-205ENST00000583805 DDX60Q8IY21 1712 aaKnown RBP11.4□□□□□ -0.58
CRLF3-205ENST00000583805 MAP3K15Q6ZN16 1313 aa11.4□□□□□ -0.58
CRLF3-205ENST00000583805 CCDC24Q8N4L8 307 aa11.4□□□□□ -0.58
CRLF3-205ENST00000583805 KRI1Q8N9T8 703 aaKnown RBP11.4□□□□□ -0.58
CRLF3-205ENST00000583805 MYBBP1AQ9BQG0 1328 aaKnown RBP11.39□□□□□ -0.59
CRLF3-205ENST00000583805 MYH3P11055 1940 aa11.39□□□□□ -0.59
CRLF3-205ENST00000583805 GTF2E1P29083 439 aaPredicted RBP11.39□□□□□ -0.59
CRLF3-205ENST00000583805 DNAJC5GQ8N7S2 189 aa11.39□□□□□ -0.59
CRLF3-205ENST00000583805 KLRG1Q96E93 195 aa11.39□□□□□ -0.59
CRLF3-205ENST00000583805 MIS18AQ9NYP9 233 aa11.39□□□□□ -0.59
CRLF3-205ENST00000583805 TAF1P21675 1872 aa11.38□□□□□ -0.59
CRLF3-205ENST00000583805 LRRC37AA6NMS7 1700 aa11.38□□□□□ -0.59
CRLF3-205ENST00000583805 IQCA1LA6NCM1 817 aa11.38□□□□□ -0.59
CRLF3-205ENST00000583805 FKBP4Q02790 459 aaKnown RBP eCLIP11.38□□□□□ -0.59
CRLF3-205ENST00000583805 GRIPAP1Q4V328 841 aa11.38□□□□□ -0.59
CRLF3-205ENST00000583805 IFFO2Q5TF58 517 aa11.38□□□□□ -0.59
CRLF3-205ENST00000583805 CC2D2BQ6DHV5 1058 aa11.38□□□□□ -0.59
CRLF3-205ENST00000583805 RTKN2Q8IZC4 609 aa11.38□□□□□ -0.59
CRLF3-205ENST00000583805 TSPYL4Q9UJ04 414 aa11.38□□□□□ -0.59
CRLF3-205ENST00000583805 RNF123Q5XPI4 1314 aa11.37□□□□□ -0.59
CRLF3-205ENST00000583805 PCNTO95613 3336 aa11.37□□□□□ -0.59
CRLF3-205ENST00000583805 RIPK4P57078 832 aa11.37□□□□□ -0.59
CRLF3-205ENST00000583805 HLFQ16534 295 aa11.37□□□□□ -0.59
CRLF3-205ENST00000583805 CRY2Q49AN0 593 aa11.37□□□□□ -0.59
CRLF3-205ENST00000583805 C7orf43Q8WVR3 580 aa11.37□□□□□ -0.59
CRLF3-205ENST00000583805 ABCC12Q96J65 1359 aa11.37□□□□□ -0.59
CRLF3-205ENST00000583805 SNED1Q8TER0 1413 aa11.36□□□□□ -0.59
CRLF3-205ENST00000583805 PARP10Q53GL7 1025 aa11.36□□□□□ -0.59
CRLF3-205ENST00000583805 GIGYF2Q6Y7W6 1299 aaKnown RBP11.36□□□□□ -0.59
CRLF3-205ENST00000583805 PPP1R42Q7Z4L9 355 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms