RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 TESPA1A2RU30 521 aaPredicted RBP10.91□□□□□ -0.66
NPLOC4-211ENST00000573212 IQCA1LA6NCM1 817 aa10.91□□□□□ -0.66
NPLOC4-211ENST00000573212 ST5P78524 1137 aa10.91□□□□□ -0.66
NPLOC4-211ENST00000573212 CC2D1BQ5T0F9 858 aaKnown RBP10.91□□□□□ -0.66
NPLOC4-211ENST00000573212 FBXO22Q8NEZ5 403 aa10.91□□□□□ -0.66
NPLOC4-211ENST00000573212 PHACTR3Q96KR7 559 aa10.91□□□□□ -0.66
NPLOC4-211ENST00000573212 UBR2Q8IWV8 1755 aa10.9□□□□□ -0.66
NPLOC4-211ENST00000573212 FER1L6Q2WGJ9 1857 aa10.9□□□□□ -0.66
NPLOC4-211ENST00000573212 ANKRD31Q8N7Z5 1873 aa10.9□□□□□ -0.66
NPLOC4-211ENST00000573212 BTBD11A6QL63 1104 aa10.9□□□□□ -0.66
NPLOC4-211ENST00000573212 NPR1P16066 1061 aa10.9□□□□□ -0.66
NPLOC4-211ENST00000573212 VEGFBP49765 207 aa10.9□□□□□ -0.66
NPLOC4-211ENST00000573212 FKBP4Q02790 459 aaKnown RBP eCLIP10.9□□□□□ -0.66
NPLOC4-211ENST00000573212 WBP1LQ9NX94 342 aa10.9□□□□□ -0.66
NPLOC4-211ENST00000573212 ZNF330Q9Y3S2 320 aaPredicted RBP10.9□□□□□ -0.66
NPLOC4-211ENST00000573212 NPC1L1Q9UHC9 1359 aa10.9□□□□□ -0.67
NPLOC4-211ENST00000573212 COL3A1P02461 1466 aaPredicted RBP10.89□□□□□ -0.67
NPLOC4-211ENST00000573212 PRAMEF22A3QJZ6 481 aa10.89□□□□□ -0.67
NPLOC4-211ENST00000573212 TMEM88BA6NKF7 163 aa10.89□□□□□ -0.67
NPLOC4-211ENST00000573212 FZD9O00144 591 aa10.89□□□□□ -0.67
NPLOC4-211ENST00000573212 U2SURPO15042 1029 aaKnown RBP10.89□□□□□ -0.67
NPLOC4-211ENST00000573212 PIP4K2AP48426 406 aaPredicted RBP10.89□□□□□ -0.67
NPLOC4-211ENST00000573212 CCDC93Q567U6 631 aa10.89□□□□□ -0.67
NPLOC4-211ENST00000573212 TPTE2Q6XPS3 522 aa10.89□□□□□ -0.67
NPLOC4-211ENST00000573212 NPM2Q86SE8 214 aaKnown RBP10.89□□□□□ -0.67
NPLOC4-211ENST00000573212 RASSF10A6NK89 507 aa10.88□□□□□ -0.67
NPLOC4-211ENST00000573212 NBPF26B4DH59 902 aa10.88□□□□□ -0.67
NPLOC4-211ENST00000573212 SNRPA1P09661 255 aaKnown RBP10.88□□□□□ -0.67
NPLOC4-211ENST00000573212 CTCFP49711 727 aaPredicted RBP10.88□□□□□ -0.67
NPLOC4-211ENST00000573212 CCDC88AQ3V6T2 1871 aa10.88□□□□□ -0.67
NPLOC4-211ENST00000573212 NBPF10Q6P3W6 841 aaKnown RBP10.88□□□□□ -0.67
NPLOC4-211ENST00000573212 CHRDL2Q6WN34 429 aa10.88□□□□□ -0.67
NPLOC4-211ENST00000573212 NBPF5PQ86XG9 351 aaPredicted RBP10.88□□□□□ -0.67
NPLOC4-211ENST00000573212 TIAM2Q8IVF5 1701 aa10.88□□□□□ -0.67
NPLOC4-211ENST00000573212 RTKN2Q8IZC4 609 aa10.88□□□□□ -0.67
NPLOC4-211ENST00000573212 SYNE4Q8N205 404 aa10.88□□□□□ -0.67
NPLOC4-211ENST00000573212 NBPF15Q8N660 670 aa10.88□□□□□ -0.67
NPLOC4-211ENST00000573212 RSPH6AQ9H0K4 717 aa10.88□□□□□ -0.67
NPLOC4-211ENST00000573212 ZNF277Q9NRM2 450 aaPredicted RBP10.88□□□□□ -0.67
NPLOC4-211ENST00000573212 HACL1Q9UJ83 578 aa10.88□□□□□ -0.67
NPLOC4-211ENST00000573212 SLX4Q8IY92 1834 aa10.87□□□□□ -0.67
NPLOC4-211ENST00000573212 SEMA3EO15041 775 aa10.87□□□□□ -0.67
NPLOC4-211ENST00000573212 ALDH1B1P30837 517 aa10.87□□□□□ -0.67
NPLOC4-211ENST00000573212 EPHX2P34913 555 aa10.87□□□□□ -0.67
NPLOC4-211ENST00000573212 OLFM4Q6UX06 510 aa10.87□□□□□ -0.67
NPLOC4-211ENST00000573212 CNTROBQ8N137 903 aa10.87□□□□□ -0.67
NPLOC4-211ENST00000573212 PIP4P2Q8N4L2 257 aa10.87□□□□□ -0.67
NPLOC4-211ENST00000573212 COL11A2P13942 1736 aaPredicted RBP10.87□□□□□ -0.67
NPLOC4-211ENST00000573212 ZNF541Q9H0D2 1346 aa10.86□□□□□ -0.67
NPLOC4-211ENST00000573212 DICER1Q9UPY3 1922 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-211ENST00000573212 NPHP1O15259 732 aa10.86□□□□□ -0.67
NPLOC4-211ENST00000573212 PRKAR2BP31323 418 aa10.86□□□□□ -0.67
NPLOC4-211ENST00000573212 IARSP41252 1262 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-211ENST00000573212 HLFQ16534 295 aa10.86□□□□□ -0.67
NPLOC4-211ENST00000573212 DEFB115Q30KQ5 88 aa10.86□□□□□ -0.67
NPLOC4-211ENST00000573212 PNMA8AQ86V59 439 aaPredicted RBP10.86□□□□□ -0.67
NPLOC4-211ENST00000573212 ZNF652Q9Y2D9 606 aa10.86□□□□□ -0.67
NPLOC4-211ENST00000573212 SCN7AQ01118 1682 aa10.85□□□□□ -0.67
NPLOC4-211ENST00000573212 SNED1Q8TER0 1413 aa10.85□□□□□ -0.67
NPLOC4-211ENST00000573212 HTATSF1O43719 755 aaKnown RBP10.85□□□□□ -0.67
NPLOC4-211ENST00000573212 LBX1P52954 281 aa10.85□□□□□ -0.67
NPLOC4-211ENST00000573212 EAPPQ56P03 285 aaPredicted RBP10.85□□□□□ -0.67
NPLOC4-211ENST00000573212 GPC2Q8N158 579 aa10.85□□□□□ -0.67
NPLOC4-211ENST00000573212 EFCAB3Q8N7B9 438 aa10.85□□□□□ -0.67
NPLOC4-211ENST00000573212 PSMD1Q99460 953 aa10.85□□□□□ -0.67
NPLOC4-211ENST00000573212 NIP7Q9Y221 180 aaKnown RBP eCLIP10.85□□□□□ -0.67
NPLOC4-211ENST00000573212 HSPA8P11142 646 aaKnown RBP10.84□□□□□ -0.67
NPLOC4-211ENST00000573212 CRY2Q49AN0 593 aa10.84□□□□□ -0.67
NPLOC4-211ENST00000573212 MAP1SQ66K74 1059 aaPredicted RBP10.84□□□□□ -0.67
NPLOC4-211ENST00000573212 AIDAQ96BJ3 306 aa10.84□□□□□ -0.67
NPLOC4-211ENST00000573212 SLC24A3Q9HC58 644 aa10.84□□□□□ -0.67
NPLOC4-211ENST00000573212 RNF123Q5XPI4 1314 aa10.84□□□□□ -0.67
NPLOC4-211ENST00000573212 SIPA1L3O60292 1781 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-211ENST00000573212 HOXA10P31260 410 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-211ENST00000573212 TAF7Q15545 349 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-211ENST00000573212 NEUROD2Q15784 382 aa10.83□□□□□ -0.68
NPLOC4-211ENST00000573212 CC2D2BQ6DHV5 1058 aa10.83□□□□□ -0.68
NPLOC4-211ENST00000573212 MCM10Q7L590 875 aa10.83□□□□□ -0.68
NPLOC4-211ENST00000573212 WDR33Q9C0J8 1336 aaKnown RBP10.83□□□□□ -0.68
NPLOC4-211ENST00000573212 SCN4AP35499 1836 aa10.82□□□□□ -0.68
NPLOC4-211ENST00000573212 FAM177BA6PVY3 158 aa10.82□□□□□ -0.68
NPLOC4-211ENST00000573212 ERVV-1B6SEH8 477 aa10.82□□□□□ -0.68
NPLOC4-211ENST00000573212 MAP2K1Q02750 393 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-211ENST00000573212 DCTN1Q14203 1278 aa10.82□□□□□ -0.68
NPLOC4-211ENST00000573212 IFNL1Q8IU54 200 aa10.82□□□□□ -0.68
NPLOC4-211ENST00000573212 RTF1Q92541 710 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-211ENST00000573212 DDX21Q9NR30 783 aaKnown RBP eCLIP10.82□□□□□ -0.68
NPLOC4-211ENST00000573212 ADAMTSL1Q8N6G6 1762 aa10.82□□□□□ -0.68
NPLOC4-211ENST00000573212 VIRMAQ69YN4 1812 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-211ENST00000573212 ZMYND10O75800 440 aa10.81□□□□□ -0.68
NPLOC4-211ENST00000573212 EIF6P56537 245 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-211ENST00000573212 FMR1Q06787 632 aaKnown RBP eCLIP10.81□□□□□ -0.68
NPLOC4-211ENST00000573212 GRIPAP1Q4V328 841 aa10.81□□□□□ -0.68
NPLOC4-211ENST00000573212 CCER1Q8TC90 406 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-211ENST00000573212 JDP2Q8WYK2 163 aa10.81□□□□□ -0.68
NPLOC4-211ENST00000573212 NUDCQ9Y266 331 aa10.81□□□□□ -0.68
NPLOC4-211ENST00000573212 ARIH1Q9Y4X5 557 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-211ENST00000573212 ARFGEF2Q9Y6D5 1785 aa10.8□□□□□ -0.68
NPLOC4-211ENST00000573212 GTF2E1P29083 439 aaPredicted RBP10.8□□□□□ -0.68
NPLOC4-211ENST00000573212 EPS15P42566 896 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms