RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 DEPDC5O75140 1603 aa5.3□□□□□ -1.56
SPG11-225ENST00000561391 UGGT1Q9NYU2 1555 aa5.3□□□□□ -1.56
SPG11-225ENST00000561391 SPAG9O60271 1321 aaKnown RBP5.3□□□□□ -1.56
SPG11-225ENST00000561391 KCNA6P17658 529 aa5.3□□□□□ -1.56
SPG11-225ENST00000561391 GPC1P35052 558 aa5.3□□□□□ -1.56
SPG11-225ENST00000561391 VAC14Q08AM6 782 aa5.3□□□□□ -1.56
SPG11-225ENST00000561391 POU4F2Q12837 409 aa5.3□□□□□ -1.56
SPG11-225ENST00000561391 NLRP3Q96P20 1036 aa5.3□□□□□ -1.56
SPG11-225ENST00000561391 MSH6P52701 1360 aa5.29□□□□□ -1.56
SPG11-225ENST00000561391 KIDINS220Q9ULH0 1771 aa5.29□□□□□ -1.56
SPG11-225ENST00000561391 KDM5DQ9BY66 1539 aa5.29□□□□□ -1.56
SPG11-225ENST00000561391 HNRNPMP52272 730 aaKnown RBP eCLIP5.29□□□□□ -1.56
SPG11-225ENST00000561391 IRF5Q13568 498 aa5.29□□□□□ -1.56
SPG11-225ENST00000561391 SEPT12Q8IYM1 358 aa5.29□□□□□ -1.56
SPG11-225ENST00000561391 FNBP4Q8N3X1 1017 aaPredicted RBP5.29□□□□□ -1.56
SPG11-225ENST00000561391 SLC26A8Q96RN1 970 aa5.29□□□□□ -1.56
SPG11-225ENST00000561391 ARID3AQ99856 593 aa5.29□□□□□ -1.56
SPG11-225ENST00000561391 GOLGA2P5Q9HBQ8 144 aa5.29□□□□□ -1.56
SPG11-225ENST00000561391 TRPC5Q9UL62 973 aaPredicted RBP5.29□□□□□ -1.56
SPG11-225ENST00000561391 PHF24Q9UPV7 400 aa5.29□□□□□ -1.56
SPG11-225ENST00000561391 COL16A1Q07092 1604 aaPredicted RBP5.29□□□□□ -1.56
SPG11-225ENST00000561391 MIA2Q96PC5 1412 aa5.29□□□□□ -1.56
SPG11-225ENST00000561391 MYO5CQ9NQX4 1742 aa5.28□□□□□ -1.56
SPG11-225ENST00000561391 LRRC9Q6ZRR7 1453 aa5.28□□□□□ -1.56
SPG11-225ENST00000561391 SHISA8B8ZZ34 492 aa5.28□□□□□ -1.56
SPG11-225ENST00000561391 PIK3R2O00459 728 aa5.28□□□□□ -1.56
SPG11-225ENST00000561391 COL8A1P27658 744 aa5.28□□□□□ -1.56
SPG11-225ENST00000561391 TIMMDC1Q9NPL8 285 aa5.28□□□□□ -1.56
SPG11-225ENST00000561391 GDF2Q9UK05 429 aaPredicted RBP5.28□□□□□ -1.56
SPG11-225ENST00000561391 WASHC2CQ9Y4E1 1318 aa5.27□□□□□ -1.57
SPG11-225ENST00000561391 A0A1W2PRU2 124 aa5.27□□□□□ -1.57
SPG11-225ENST00000561391 POM121CA8CG34 1229 aa5.27□□□□□ -1.57
SPG11-225ENST00000561391 ESPNB1AK53 854 aa5.27□□□□□ -1.57
SPG11-225ENST00000561391 GPR37L1O60883 481 aa5.27□□□□□ -1.57
SPG11-225ENST00000561391 BLMP54132 1417 aaPredicted RBP5.27□□□□□ -1.57
SPG11-225ENST00000561391 WASHC4Q2M389 1173 aa5.27□□□□□ -1.57
SPG11-225ENST00000561391 NBPF10Q6P3W6 841 aaKnown RBP5.27□□□□□ -1.57
SPG11-225ENST00000561391 NBPF15Q8N660 670 aa5.27□□□□□ -1.57
SPG11-225ENST00000561391 EDARADDQ8WWZ3 215 aa5.27□□□□□ -1.57
SPG11-225ENST00000561391 PPP1R1BQ9UD71 204 aaPredicted RBP5.27□□□□□ -1.57
SPG11-225ENST00000561391 CDK11AQ9UQ88 783 aaPredicted RBP5.27□□□□□ -1.57
SPG11-225ENST00000561391 EID1Q9Y6B2 187 aa5.27□□□□□ -1.57
SPG11-225ENST00000561391 KIF3BO15066 747 aa5.26□□□□□ -1.57
SPG11-225ENST00000561391 F11P03951 625 aa5.26□□□□□ -1.57
SPG11-225ENST00000561391 LCE1DQ5T752 114 aa5.26□□□□□ -1.57
SPG11-225ENST00000561391 TAS1R3Q7RTX0 852 aa5.26□□□□□ -1.57
SPG11-225ENST00000561391 CALR3Q96L12 384 aaKnown RBP5.26□□□□□ -1.57
SPG11-225ENST00000561391 C1orf115Q9H7X2 142 aa5.26□□□□□ -1.57
SPG11-225ENST00000561391 GPAMQ9HCL2 828 aa5.26□□□□□ -1.57
SPG11-225ENST00000561391 A2MP01023 1474 aa5.26□□□□□ -1.57
SPG11-225ENST00000561391 EP400Q96L91 3159 aa5.25□□□□□ -1.57
SPG11-225ENST00000561391 SHPRHQ149N8 1683 aa5.25□□□□□ -1.57
SPG11-225ENST00000561391 ZC3H13Q5T200 1668 aaKnown RBP5.25□□□□□ -1.57
SPG11-225ENST00000561391 ZBBXA8MT70 800 aa5.25□□□□□ -1.57
SPG11-225ENST00000561391 C1QTNF9BB2RNN3 333 aa5.25□□□□□ -1.57
SPG11-225ENST00000561391 WASLO00401 505 aaPredicted RBP5.25□□□□□ -1.57
SPG11-225ENST00000561391 FBXO45P0C2W1 286 aa5.25□□□□□ -1.57
SPG11-225ENST00000561391 SEMA3FQ13275 785 aa5.25□□□□□ -1.57
SPG11-225ENST00000561391 ZMYM1Q5SVZ6 1142 aa5.25□□□□□ -1.57
SPG11-225ENST00000561391 HDGFL1Q5TGJ6 251 aa5.25□□□□□ -1.57
SPG11-225ENST00000561391 CYP2U1Q7Z449 544 aa5.25□□□□□ -1.57
SPG11-225ENST00000561391 GOLGA6L1Q8N7Z2 621 aa5.25□□□□□ -1.57
SPG11-225ENST00000561391 LRRC59Q96AG4 307 aaKnown RBP5.25□□□□□ -1.57
SPG11-225ENST00000561391 KLRG1Q96E93 195 aa5.25□□□□□ -1.57
SPG11-225ENST00000561391 CFHR5Q9BXR6 569 aa5.25□□□□□ -1.57
SPG11-225ENST00000561391 SUV39H2Q9H5I1 410 aa5.25□□□□□ -1.57
SPG11-225ENST00000561391 NHSL1Q5SYE7 1610 aa5.25□□□□□ -1.57
SPG11-225ENST00000561391 NLRP1Q9C000 1473 aa5.25□□□□□ -1.57
SPG11-225ENST00000561391 NWD1Q149M9 1564 aa5.25□□□□□ -1.57
SPG11-225ENST00000561391 ATP7AQ04656 1500 aa5.24□□□□□ -1.57
SPG11-225ENST00000561391 MAP3K1Q13233 1512 aa5.24□□□□□ -1.57
SPG11-225ENST00000561391 SCO2A0A1W2PP80 73 aa5.24□□□□□ -1.57
SPG11-225ENST00000561391 GNB5O14775 395 aa5.24□□□□□ -1.57
SPG11-225ENST00000561391 GIGYF1O75420 1035 aaPredicted RBP5.24□□□□□ -1.57
SPG11-225ENST00000561391 BMP4P12644 408 aa5.24□□□□□ -1.57
SPG11-225ENST00000561391 ATF3P18847 181 aa5.24□□□□□ -1.57
SPG11-225ENST00000561391 EIF4G2P78344 907 aaKnown RBP eCLIP5.24□□□□□ -1.57
SPG11-225ENST00000561391 NR1H3Q13133 447 aa5.24□□□□□ -1.57
SPG11-225ENST00000561391 CC2D2BQ6DHV5 1058 aa5.24□□□□□ -1.57
SPG11-225ENST00000561391 BRINP3Q76B58 766 aa5.24□□□□□ -1.57
SPG11-225ENST00000561391 DDX17Q92841 729 aaKnown RBP5.24□□□□□ -1.57
SPG11-225ENST00000561391 GLMNQ92990 594 aa5.24□□□□□ -1.57
SPG11-225ENST00000561391 SEMA6BQ9H3T3 888 aa5.24□□□□□ -1.57
SPG11-225ENST00000561391 NOP53Q9NZM5 478 aaKnown RBP5.24□□□□□ -1.57
SPG11-225ENST00000561391 PCDHB9Q9Y5E1 797 aa5.24□□□□□ -1.57
SPG11-225ENST00000561391 BCL9LQ86UU0 1499 aa5.24□□□□□ -1.57
SPG11-225ENST00000561391 SCAF11Q99590 1463 aaKnown RBP5.24□□□□□ -1.57
SPG11-225ENST00000561391 KIF14Q15058 1648 aa5.23□□□□□ -1.57
SPG11-225ENST00000561391 SPATA31C2B4DYI2 1134 aa5.23□□□□□ -1.57
SPG11-225ENST00000561391 CSB-PGBD3P0DP91 1061 aa5.23□□□□□ -1.57
SPG11-225ENST00000561391 CLN3Q13286 438 aa5.23□□□□□ -1.57
SPG11-225ENST00000561391 WDR44Q5JSH3 913 aa5.23□□□□□ -1.57
SPG11-225ENST00000561391 C1orf229Q6ZS94 237 aaPredicted RBP5.23□□□□□ -1.57
SPG11-225ENST00000561391 CD163Q86VB7 1156 aa5.23□□□□□ -1.57
SPG11-225ENST00000561391 PGBD3Q8N328 593 aa5.23□□□□□ -1.57
SPG11-225ENST00000561391 GRIP2Q9C0E4 1043 aa5.23□□□□□ -1.57
SPG11-225ENST00000561391 ARHGEF10LQ9HCE6 1279 aa5.23□□□□□ -1.57
SPG11-225ENST00000561391 PZPP20742 1482 aa5.23□□□□□ -1.57
SPG11-225ENST00000561391 SAMD9Q5K651 1589 aa5.22□□□□□ -1.57
SPG11-225ENST00000561391 SAMD9LQ8IVG5 1584 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms