RNA–Protein interactions for RNA: ENST00000560887.1

TCF12-220, Transcript of transcription factor 12, humanhuman

TSL 4

Gene TCF12, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-220ENST00000560887 CLUAP1Q96AJ1 413 aa8.57□□□□□ -1.04
TCF12-220ENST00000560887 DDRGK1Q96HY6 314 aa8.57□□□□□ -1.04
TCF12-220ENST00000560887 ZNF496Q96IT1 587 aaPredicted RBP8.57□□□□□ -1.04
TCF12-220ENST00000560887 CCNL1Q9UK58 526 aaPredicted RBP8.57□□□□□ -1.04
TCF12-220ENST00000560887 CASZ1Q86V15 1759 aa8.57□□□□□ -1.04
TCF12-220ENST00000560887 AFDNP55196 1824 aaKnown RBP8.57□□□□□ -1.04
TCF12-220ENST00000560887 GTPBP6O43824 516 aaPredicted RBP8.56□□□□□ -1.04
TCF12-220ENST00000560887 SNRPA1P09661 255 aaKnown RBP8.56□□□□□ -1.04
TCF12-220ENST00000560887 C20orf194Q5TEA3 1177 aa8.56□□□□□ -1.04
TCF12-220ENST00000560887 PTF1AQ7RTS3 328 aa8.56□□□□□ -1.04
TCF12-220ENST00000560887 TEX13AQ9BXU3 409 aaPredicted RBP8.56□□□□□ -1.04
TCF12-220ENST00000560887 NOP58Q9Y2X3 529 aaKnown RBP8.56□□□□□ -1.04
TCF12-220ENST00000560887 COL24A1Q17RW2 1714 aa8.56□□□□□ -1.04
TCF12-220ENST00000560887 IPO8O15397 1037 aaKnown RBP8.55□□□□□ -1.04
TCF12-220ENST00000560887 PTCD1O75127 700 aaKnown RBP8.55□□□□□ -1.04
TCF12-220ENST00000560887 GIGYF1O75420 1035 aaPredicted RBP8.55□□□□□ -1.04
TCF12-220ENST00000560887 BCAR3O75815 825 aa8.55□□□□□ -1.04
TCF12-220ENST00000560887 STARD3NLO95772 234 aa8.55□□□□□ -1.04
TCF12-220ENST00000560887 FAM161AQ3B820 660 aa8.55□□□□□ -1.04
TCF12-220ENST00000560887 ILDR2Q71H61 639 aa8.55□□□□□ -1.04
TCF12-220ENST00000560887 UPF1Q92900 1129 aaKnown RBP eCLIP8.55□□□□□ -1.04
TCF12-220ENST00000560887 KRTAP3-3Q9BYR6 98 aa8.55□□□□□ -1.04
TCF12-220ENST00000560887 KRTAP3-2Q9BYR7 98 aa8.55□□□□□ -1.04
TCF12-220ENST00000560887 MIS18AQ9NYP9 233 aa8.55□□□□□ -1.04
TCF12-220ENST00000560887 PXDNLA1KZ92 1463 aa8.55□□□□□ -1.04
TCF12-220ENST00000560887 NUP98P52948 1817 aa8.54□□□□□ -1.04
TCF12-220ENST00000560887 LAMB2P55268 1798 aa8.54□□□□□ -1.04
TCF12-220ENST00000560887 KCNQ3O43525 872 aa8.54□□□□□ -1.04
TCF12-220ENST00000560887 ATP6V1AP38606 617 aa8.54□□□□□ -1.04
TCF12-220ENST00000560887 TXNRD1Q16881 649 aa8.54□□□□□ -1.04
TCF12-220ENST00000560887 TWISTNBQ3B726 338 aaPredicted RBP8.54□□□□□ -1.04
TCF12-220ENST00000560887 HDGFL1Q5TGJ6 251 aa8.54□□□□□ -1.04
TCF12-220ENST00000560887 RYDENQ9NUL5 291 aaKnown RBP8.54□□□□□ -1.04
TCF12-220ENST00000560887 COL15A1P39059 1388 aa8.53□□□□□ -1.04
TCF12-220ENST00000560887 EXOSC9Q06265 439 aaKnown RBP8.53□□□□□ -1.04
TCF12-220ENST00000560887 HDAC1Q13547 482 aaPredicted RBP8.53□□□□□ -1.04
TCF12-220ENST00000560887 ARSIQ5FYB1 569 aa8.53□□□□□ -1.04
TCF12-220ENST00000560887 ZKSCAN2Q63HK3 967 aa8.53□□□□□ -1.04
TCF12-220ENST00000560887 LINC00116Q8NCU8 138 aa8.53□□□□□ -1.04
TCF12-220ENST00000560887 TMC2Q8TDI7 906 aa8.53□□□□□ -1.04
TCF12-220ENST00000560887 CAMKK2Q96RR4 588 aa8.53□□□□□ -1.04
TCF12-220ENST00000560887 RWDD1Q9H446 243 aaPredicted RBP8.53□□□□□ -1.04
TCF12-220ENST00000560887 GPHNQ9NQX3 736 aaPredicted RBP8.53□□□□□ -1.04
TCF12-220ENST00000560887 KIF16BQ96L93 1317 aa8.53□□□□□ -1.04
TCF12-220ENST00000560887 CYP19A1P11511 503 aaPredicted RBP8.52□□□□□ -1.05
TCF12-220ENST00000560887 CRKLP46109 303 aaKnown RBP8.52□□□□□ -1.05
TCF12-220ENST00000560887 FOXK1P85037 733 aa8.52□□□□□ -1.05
TCF12-220ENST00000560887 EN1Q05925 392 aaPredicted RBP8.52□□□□□ -1.05
TCF12-220ENST00000560887 ITPK1Q13572 414 aa8.52□□□□□ -1.05
TCF12-220ENST00000560887 MVPQ14764 893 aaKnown RBP8.52□□□□□ -1.05
TCF12-220ENST00000560887 KRT24Q2M2I5 525 aa8.52□□□□□ -1.05
TCF12-220ENST00000560887 CCDC30Q5VVM6 783 aa8.52□□□□□ -1.05
TCF12-220ENST00000560887 DNAJC10Q8IXB1 793 aa8.52□□□□□ -1.05
TCF12-220ENST00000560887 C8orf58Q8NAV2 365 aa8.52□□□□□ -1.05
TCF12-220ENST00000560887 AK7Q96M32 723 aa8.52□□□□□ -1.05
TCF12-220ENST00000560887 SLC4A9Q96Q91 983 aa8.52□□□□□ -1.05
TCF12-220ENST00000560887 STK31Q9BXU1 1019 aa8.52□□□□□ -1.05
TCF12-220ENST00000560887 CCDC87Q9NVE4 849 aa8.52□□□□□ -1.05
TCF12-220ENST00000560887 DDX19BQ9UMR2 479 aa8.52□□□□□ -1.05
TCF12-220ENST00000560887 EZH2Q15910 746 aaKnown RBP8.51□□□□□ -1.05
TCF12-220ENST00000560887 RC3H1Q5TC82 1133 aaKnown RBP8.51□□□□□ -1.05
TCF12-220ENST00000560887 DEFB132Q7Z7B7 95 aa8.51□□□□□ -1.05
TCF12-220ENST00000560887 DZIP1LQ8IYY4 767 aaKnown RBP8.51□□□□□ -1.05
TCF12-220ENST00000560887 TSPYL6Q8N831 410 aa8.51□□□□□ -1.05
TCF12-220ENST00000560887 KHSRPQ92945 711 aaKnown RBP eCLIP8.51□□□□□ -1.053e-7■□□□□ 9.3
TCF12-220ENST00000560887 LRRC4BQ9NT99 713 aa8.51□□□□□ -1.05
TCF12-220ENST00000560887 DBF4Q9UBU7 674 aaPredicted RBP8.51□□□□□ -1.05
TCF12-220ENST00000560887 PRAMEF22A3QJZ6 481 aa8.5□□□□□ -1.05
TCF12-220ENST00000560887 GNPATO15228 680 aa8.5□□□□□ -1.05
TCF12-220ENST00000560887 SSFA2P28290 1259 aa8.5□□□□□ -1.05
TCF12-220ENST00000560887 IL6STP40189 918 aaPredicted RBP8.5□□□□□ -1.05
TCF12-220ENST00000560887 C8orf34Q49A92 452 aa8.5□□□□□ -1.05
TCF12-220ENST00000560887 ATF7IPQ6VMQ6 1270 aa8.5□□□□□ -1.05
TCF12-220ENST00000560887 SPNS2Q8IVW8 549 aa8.5□□□□□ -1.05
TCF12-220ENST00000560887 DDX21Q9NR30 783 aaKnown RBP eCLIP8.5□□□□□ -1.05
TCF12-220ENST00000560887 CHPF2Q9P2E5 772 aa8.5□□□□□ -1.05
TCF12-220ENST00000560887 ZBTB1Q9Y2K1 713 aa8.5□□□□□ -1.05
TCF12-220ENST00000560887 MYH3P11055 1940 aa8.5□□□□□ -1.05
TCF12-220ENST00000560887 ATP10DQ9P241 1426 aa8.49□□□□□ -1.05
TCF12-220ENST00000560887 A0A087WZG4 1122 aa8.49□□□□□ -1.05
TCF12-220ENST00000560887 VAMP4O75379 141 aa8.49□□□□□ -1.05
TCF12-220ENST00000560887 EIF2S2P20042 333 aaKnown RBP8.49□□□□□ -1.05
TCF12-220ENST00000560887 CANXP27824 592 aaKnown RBP8.49□□□□□ -1.05
TCF12-220ENST00000560887 ZNF827Q17R98 1081 aa8.49□□□□□ -1.05
TCF12-220ENST00000560887 CRISPLD2Q9H0B8 497 aa8.49□□□□□ -1.05
TCF12-220ENST00000560887 SMC4Q9NTJ3 1288 aa8.49□□□□□ -1.05
TCF12-220ENST00000560887 HYPKQ9NX55 129 aa8.49□□□□□ -1.05
TCF12-220ENST00000560887 STK32BQ9NY57 414 aa8.49□□□□□ -1.05
TCF12-220ENST00000560887 RTCBQ9Y3I0 505 aaKnown RBP8.49□□□□□ -1.05
TCF12-220ENST00000560887 NRXN2Q9P2S2 1712 aa8.49□□□□□ -1.05
TCF12-220ENST00000560887 LRP5O75197 1615 aa8.48□□□□□ -1.05
TCF12-220ENST00000560887 ELL2O00472 640 aaPredicted RBP8.48□□□□□ -1.05
TCF12-220ENST00000560887 IGHDP01880 384 aa8.48□□□□□ -1.05
TCF12-220ENST00000560887 KCNQ4P56696 695 aa8.48□□□□□ -1.05
TCF12-220ENST00000560887 NBPF14Q5TI25 921 aa8.48□□□□□ -1.05
TCF12-220ENST00000560887 INTS5Q6P9B9 1019 aaKnown RBP8.48□□□□□ -1.05
TCF12-220ENST00000560887 KIF6Q6ZMV9 814 aa8.48□□□□□ -1.05
TCF12-220ENST00000560887 SMC5Q8IY18 1101 aa8.48□□□□□ -1.05
TCF12-220ENST00000560887 FLAD1Q8NFF5 587 aa8.48□□□□□ -1.05
TCF12-220ENST00000560887 PTCD2Q8WV60 388 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms