RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 CT47B1P0C2W7 299 aaPredicted RBP12.63□□□□□ -0.39
LETMD1-234ENST00000552645 NEXNQ0ZGT2 675 aa12.63□□□□□ -0.39
LETMD1-234ENST00000552645 ERFEQ4G0M1 354 aa12.63□□□□□ -0.39
LETMD1-234ENST00000552645 PARP10Q53GL7 1025 aa12.63□□□□□ -0.39
LETMD1-234ENST00000552645 SLC4A10Q6U841 1118 aa12.63□□□□□ -0.39
LETMD1-234ENST00000552645 NLRP10Q86W26 655 aa12.63□□□□□ -0.39
LETMD1-234ENST00000552645 METTL22Q9BUU2 404 aaPredicted RBP12.63□□□□□ -0.39
LETMD1-234ENST00000552645 UTP14AQ9BVJ6 771 aaKnown RBP12.63□□□□□ -0.39
LETMD1-234ENST00000552645 TRMT112Q9UI30 125 aaKnown RBP12.63□□□□□ -0.39
LETMD1-234ENST00000552645 DPEP1P16444 411 aa12.62□□□□□ -0.39
LETMD1-234ENST00000552645 CHRNA5P30532 468 aa12.62□□□□□ -0.39
LETMD1-234ENST00000552645 ALDH1L2Q3SY69 923 aa12.62□□□□□ -0.39
LETMD1-234ENST00000552645 DNAAF4Q8WXU2 420 aa12.62□□□□□ -0.39
LETMD1-234ENST00000552645 NOP58Q9Y2X3 529 aaKnown RBP12.62□□□□□ -0.39
LETMD1-234ENST00000552645 CACNA1SQ13698 1873 aa12.62□□□□□ -0.39
LETMD1-234ENST00000552645 NTSR2O95665 410 aa12.62□□□□□ -0.39
LETMD1-234ENST00000552645 RARSP54136 660 aaKnown RBP12.62□□□□□ -0.39
LETMD1-234ENST00000552645 C2CD5Q86YS7 1000 aa12.62□□□□□ -0.39
LETMD1-234ENST00000552645 UBE2Q2Q8WVN8 375 aa12.62□□□□□ -0.39
LETMD1-234ENST00000552645 ISCA1Q9BUE6 129 aa12.62□□□□□ -0.39
LETMD1-234ENST00000552645 BRIP1Q9BX63 1249 aa12.62□□□□□ -0.39
LETMD1-234ENST00000552645 PDE6BP35913 854 aa12.61□□□□□ -0.39
LETMD1-234ENST00000552645 TGFB2P61812 414 aa12.61□□□□□ -0.39
LETMD1-234ENST00000552645 GPR162Q16538 588 aa12.61□□□□□ -0.39
LETMD1-234ENST00000552645 CWF19L2Q2TBE0 894 aaKnown RBP12.61□□□□□ -0.39
LETMD1-234ENST00000552645 SYNE4Q8N205 404 aa12.61□□□□□ -0.39
LETMD1-234ENST00000552645 JARID2Q92833 1246 aaPredicted RBP12.61□□□□□ -0.39
LETMD1-234ENST00000552645 FAM89AQ96GI7 184 aa12.61□□□□□ -0.39
LETMD1-234ENST00000552645 CWC25Q9NXE8 425 aaPredicted RBP12.61□□□□□ -0.39
LETMD1-234ENST00000552645 NOB1Q9ULX3 412 aaKnown RBP12.61□□□□□ -0.39
LETMD1-234ENST00000552645 ABCC12Q96J65 1359 aa12.61□□□□□ -0.39
LETMD1-234ENST00000552645 PXDNLA1KZ92 1463 aa12.61□□□□□ -0.39
LETMD1-234ENST00000552645 KIAA1551Q9HCM1 1747 aa12.61□□□□□ -0.39
LETMD1-234ENST00000552645 COL11A2P13942 1736 aaPredicted RBP12.6□□□□□ -0.39
LETMD1-234ENST00000552645 TNRC6CQ9HCJ0 1690 aaKnown RBP12.6□□□□□ -0.39
LETMD1-234ENST00000552645 DCAF8L1A6NGE4 600 aa12.6□□□□□ -0.39
LETMD1-234ENST00000552645 H0YIN7 160 aa12.6□□□□□ -0.39
LETMD1-234ENST00000552645 BCAR3O75815 825 aa12.6□□□□□ -0.39
LETMD1-234ENST00000552645 FRAT1Q92837 279 aaPredicted RBP12.6□□□□□ -0.39
LETMD1-234ENST00000552645 ZNF622Q969S3 477 aaKnown RBP eCLIP12.6□□□□□ -0.39
LETMD1-234ENST00000552645 PPP4R2Q9NY27 417 aa12.6□□□□□ -0.39
LETMD1-234ENST00000552645 SH3TC1Q8TE82 1336 aa12.59□□□□□ -0.39
LETMD1-234ENST00000552645 IGKV5-2P06315 115 aa12.59□□□□□ -0.39
LETMD1-234ENST00000552645 HCLS1P14317 486 aaPredicted RBP12.59□□□□□ -0.39
LETMD1-234ENST00000552645 CCDC191Q8NCU4 936 aa12.59□□□□□ -0.39
LETMD1-234ENST00000552645 IBTKQ9P2D0 1353 aaPredicted RBP12.59□□□□□ -0.39
LETMD1-234ENST00000552645 BRCA1P38398 1863 aaKnown RBP12.59□□□□□ -0.39
LETMD1-234ENST00000552645 PTPRCP08575 1304 aa12.59□□□□□ -0.39
LETMD1-234ENST00000552645 NEURL1BA8MQ27 555 aa12.59□□□□□ -0.39
LETMD1-234ENST00000552645 BCS1LQ9Y276 419 aa12.59□□□□□ -0.39
LETMD1-234ENST00000552645 LAMB2P55268 1798 aa12.59□□□□□ -0.39
LETMD1-234ENST00000552645 DLEC1Q9Y238 1755 aa12.59□□□□□ -0.39
LETMD1-234ENST00000552645 TRIM28Q13263 835 aaKnown RBP12.58□□□□□ -0.4
LETMD1-234ENST00000552645 LINS1Q8NG48 757 aa12.58□□□□□ -0.4
LETMD1-234ENST00000552645 PIM2Q9P1W9 311 aa12.58□□□□□ -0.4
LETMD1-234ENST00000552645 DDX60Q8IY21 1712 aaKnown RBP12.57□□□□□ -0.4
LETMD1-234ENST00000552645 KIF16BQ96L93 1317 aa12.57□□□□□ -0.4
LETMD1-234ENST00000552645 UBE3BQ7Z3V4 1068 aa12.57□□□□□ -0.4
LETMD1-234ENST00000552645 ZBTB38Q8NAP3 1195 aaPredicted RBP12.57□□□□□ -0.4
LETMD1-234ENST00000552645 RPGRQ92834 1020 aaKnown RBP12.57□□□□□ -0.4
LETMD1-234ENST00000552645 NLRP3Q96P20 1036 aa12.57□□□□□ -0.4
LETMD1-234ENST00000552645 ZNF219Q9P2Y4 722 aaPredicted RBP12.57□□□□□ -0.4
LETMD1-234ENST00000552645 RNF123Q5XPI4 1314 aa12.56□□□□□ -0.4
LETMD1-234ENST00000552645 IRS4O14654 1257 aaPredicted RBP12.56□□□□□ -0.4
LETMD1-234ENST00000552645 KCNA3P22001 575 aa12.56□□□□□ -0.4
LETMD1-234ENST00000552645 GCKRQ14397 625 aa12.56□□□□□ -0.4
LETMD1-234ENST00000552645 BEND3Q5T5X7 828 aa12.56□□□□□ -0.4
LETMD1-234ENST00000552645 C3orf67Q6ZVT6 689 aa12.56□□□□□ -0.4
LETMD1-234ENST00000552645 SRCIN1Q9C0H9 1055 aa12.56□□□□□ -0.4
LETMD1-234ENST00000552645 UTRNP46939 3433 aa12.56□□□□□ -0.4
LETMD1-234ENST00000552645 TAF1P21675 1872 aa12.56□□□□□ -0.4
LETMD1-234ENST00000552645 MYH3P11055 1940 aa12.56□□□□□ -0.4
LETMD1-234ENST00000552645 IPO8O15397 1037 aaKnown RBP12.55□□□□□ -0.4
LETMD1-234ENST00000552645 PCCAP05165 728 aaPredicted RBP12.55□□□□□ -0.4
LETMD1-234ENST00000552645 SRGNP10124 158 aa12.55□□□□□ -0.4
LETMD1-234ENST00000552645 YBX3P16989 372 aaKnown RBP eCLIP12.55□□□□□ -0.45e-13■■□□□ 14.4
LETMD1-234ENST00000552645 DALRD3Q5D0E6 543 aaKnown RBP12.55□□□□□ -0.4
LETMD1-234ENST00000552645 MASTLQ96GX5 879 aa12.55□□□□□ -0.4
LETMD1-234ENST00000552645 API5Q9BZZ5 524 aaKnown RBP12.55□□□□□ -0.4
LETMD1-234ENST00000552645 NPR1P16066 1061 aa12.55□□□□□ -0.4
LETMD1-234ENST00000552645 SLC10A5Q5PT55 438 aa12.55□□□□□ -0.4
LETMD1-234ENST00000552645 TTLL6Q8N841 843 aa12.55□□□□□ -0.4
LETMD1-234ENST00000552645 CLUAP1Q96AJ1 413 aa12.55□□□□□ -0.4
LETMD1-234ENST00000552645 CCDC85AQ96PX6 553 aaPredicted RBP12.55□□□□□ -0.4
LETMD1-234ENST00000552645 C9orf78Q9NZ63 289 aaPredicted RBP12.55□□□□□ -0.4
LETMD1-234ENST00000552645 RCAN3Q9UKA8 241 aa12.55□□□□□ -0.4
LETMD1-234ENST00000552645 PDZRN3Q9UPQ7 1066 aa12.55□□□□□ -0.4
LETMD1-234ENST00000552645 SLX4Q8IY92 1834 aa12.54□□□□□ -0.4
LETMD1-234ENST00000552645 BRPF1P55201 1214 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-234ENST00000552645 STYK1Q6J9G0 422 aa12.54□□□□□ -0.4
LETMD1-234ENST00000552645 ARFGEF1Q9Y6D6 1849 aa12.54□□□□□ -0.4
LETMD1-234ENST00000552645 ZKSCAN2Q63HK3 967 aa12.53□□□□□ -0.4
LETMD1-234ENST00000552645 ATF7IPQ6VMQ6 1270 aa12.53□□□□□ -0.4
LETMD1-234ENST00000552645 CNKSR1Q969H4 720 aa12.53□□□□□ -0.4
LETMD1-234ENST00000552645 TNNQ9UQP3 1299 aa12.53□□□□□ -0.4
LETMD1-234ENST00000552645 RIC1Q4ADV7 1423 aa12.52□□□□□ -0.4
LETMD1-234ENST00000552645 KLRG2A4D1S0 409 aaPredicted RBP12.52□□□□□ -0.4
LETMD1-234ENST00000552645 GRM8O00222 908 aa12.52□□□□□ -0.4
LETMD1-234ENST00000552645 ALDH1L1O75891 902 aa12.52□□□□□ -0.4
LETMD1-234ENST00000552645 TRIM27P14373 513 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms