RNA–Protein interactions for RNA: ENST00000542428.1

AC009509.3-201, humanhuman

BASIC

Gene AC009509.3, Length 314 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009509.3-201ENST00000542428 LTBP1Q14766 1721 aa13.29□□□□□ -0.28
AC009509.3-201ENST00000542428 SLX4Q8IY92 1834 aa13.28□□□□□ -0.28
AC009509.3-201ENST00000542428 FAM177BA6PVY3 158 aa13.28□□□□□ -0.28
AC009509.3-201ENST00000542428 ATF7IPQ6VMQ6 1270 aa13.28□□□□□ -0.28
AC009509.3-201ENST00000542428 NLRP10Q86W26 655 aa13.28□□□□□ -0.28
AC009509.3-201ENST00000542428 API5Q9BZZ5 524 aaKnown RBP13.28□□□□□ -0.28
AC009509.3-201ENST00000542428 CCDC88AQ3V6T2 1871 aa13.27□□□□□ -0.28
AC009509.3-201ENST00000542428 NEURL1BA8MQ27 555 aa13.27□□□□□ -0.29
AC009509.3-201ENST00000542428 POLD1P28340 1107 aa13.27□□□□□ -0.29
AC009509.3-201ENST00000542428 NEXNQ0ZGT2 675 aa13.27□□□□□ -0.29
AC009509.3-201ENST00000542428 PARP10Q53GL7 1025 aa13.27□□□□□ -0.29
AC009509.3-201ENST00000542428 BEND3Q5T5X7 828 aa13.27□□□□□ -0.29
AC009509.3-201ENST00000542428 SUSD4Q5VX71 490 aa13.27□□□□□ -0.29
AC009509.3-201ENST00000542428 ZKSCAN2Q63HK3 967 aa13.27□□□□□ -0.29
AC009509.3-201ENST00000542428 SLC4A10Q6U841 1118 aa13.27□□□□□ -0.29
AC009509.3-201ENST00000542428 SETDB2Q96T68 719 aa13.27□□□□□ -0.29
AC009509.3-201ENST00000542428 PARP3Q9Y6F1 533 aa13.27□□□□□ -0.29
AC009509.3-201ENST00000542428 TIAM2Q8IVF5 1701 aa13.27□□□□□ -0.29
AC009509.3-201ENST00000542428 FER1L6Q2WGJ9 1857 aa13.27□□□□□ -0.29
AC009509.3-201ENST00000542428 SERPINB2P05120 415 aa13.26□□□□□ -0.29
AC009509.3-201ENST00000542428 PRR5LQ6MZQ0 368 aa13.26□□□□□ -0.29
AC009509.3-201ENST00000542428 CNBD1Q8NA66 436 aa13.26□□□□□ -0.29
AC009509.3-201ENST00000542428 LINS1Q8NG48 757 aa13.26□□□□□ -0.29
AC009509.3-201ENST00000542428 ARAP2Q8WZ64 1704 aa13.26□□□□□ -0.29
AC009509.3-201ENST00000542428 ARHGAP45Q92619 1136 aa13.26□□□□□ -0.29
AC009509.3-201ENST00000542428 CLUAP1Q96AJ1 413 aa13.26□□□□□ -0.29
AC009509.3-201ENST00000542428 RNF123Q5XPI4 1314 aa13.25□□□□□ -0.29
AC009509.3-201ENST00000542428 PLIN1O60240 522 aa13.25□□□□□ -0.29
AC009509.3-201ENST00000542428 RRP1P56182 461 aaKnown RBP13.25□□□□□ -0.29
AC009509.3-201ENST00000542428 NBPF5PQ86XG9 351 aaPredicted RBP13.25□□□□□ -0.29
AC009509.3-201ENST00000542428 NUTM1Q86Y26 1132 aa13.25□□□□□ -0.29
AC009509.3-201ENST00000542428 CCDC24Q8N4L8 307 aa13.25□□□□□ -0.29
AC009509.3-201ENST00000542428 CWC25Q9NXE8 425 aaPredicted RBP13.25□□□□□ -0.29
AC009509.3-201ENST00000542428 MYH13Q9UKX3 1938 aa13.25□□□□□ -0.29
AC009509.3-201ENST00000542428 RLBP1P12271 317 aa13.24□□□□□ -0.29
AC009509.3-201ENST00000542428 PPP1R42Q7Z4L9 355 aa13.24□□□□□ -0.29
AC009509.3-201ENST00000542428 CCDC191Q8NCU4 936 aa13.24□□□□□ -0.29
AC009509.3-201ENST00000542428 SRCIN1Q9C0H9 1055 aa13.24□□□□□ -0.29
AC009509.3-201ENST00000542428 SH3TC1Q8TE82 1336 aa13.23□□□□□ -0.29
AC009509.3-201ENST00000542428 NPHP1O15259 732 aa13.23□□□□□ -0.29
AC009509.3-201ENST00000542428 IPO8O15397 1037 aaKnown RBP13.23□□□□□ -0.29
AC009509.3-201ENST00000542428 TRIM28Q13263 835 aaKnown RBP13.23□□□□□ -0.29
AC009509.3-201ENST00000542428 GCKRQ14397 625 aa13.23□□□□□ -0.29
AC009509.3-201ENST00000542428 ERFEQ4G0M1 354 aa13.23□□□□□ -0.29
AC009509.3-201ENST00000542428 FTSJ3Q8IY81 847 aaKnown RBP13.23□□□□□ -0.29
AC009509.3-201ENST00000542428 KLHL34Q8N239 644 aa13.23□□□□□ -0.29
AC009509.3-201ENST00000542428 TMEM57Q8N5G2 664 aa13.23□□□□□ -0.29
AC009509.3-201ENST00000542428 NYXQ9GZU5 481 aa13.23□□□□□ -0.29
AC009509.3-201ENST00000542428 CDHR2Q9BYE9 1310 aa13.22□□□□□ -0.29
AC009509.3-201ENST00000542428 DICER1Q9UPY3 1922 aaKnown RBP13.22□□□□□ -0.29
AC009509.3-201ENST00000542428 ALDH1L1O75891 902 aa13.22□□□□□ -0.29
AC009509.3-201ENST00000542428 ST5P78524 1137 aa13.22□□□□□ -0.29
AC009509.3-201ENST00000542428 RTL5Q5HYW3 569 aaPredicted RBP13.22□□□□□ -0.29
AC009509.3-201ENST00000542428 C20orf194Q5TEA3 1177 aa13.22□□□□□ -0.29
AC009509.3-201ENST00000542428 DZIP1LQ8IYY4 767 aaKnown RBP13.22□□□□□ -0.29
AC009509.3-201ENST00000542428 SYNE4Q8N205 404 aa13.22□□□□□ -0.29
AC009509.3-201ENST00000542428 PANK1Q8TE04 598 aa13.22□□□□□ -0.29
AC009509.3-201ENST00000542428 UTP14AQ9BVJ6 771 aaKnown RBP13.22□□□□□ -0.29
AC009509.3-201ENST00000542428 SBF1O95248 1867 aa13.22□□□□□ -0.29
AC009509.3-201ENST00000542428 DUOX1Q9NRD9 1551 aa13.21□□□□□ -0.29
AC009509.3-201ENST00000542428 GRM8O00222 908 aa13.21□□□□□ -0.29
AC009509.3-201ENST00000542428 PCCAP05165 728 aaPredicted RBP13.21□□□□□ -0.29
AC009509.3-201ENST00000542428 CCT4P50991 539 aaKnown RBP13.21□□□□□ -0.29
AC009509.3-201ENST00000542428 CASP7P55210 303 aa13.21□□□□□ -0.29
AC009509.3-201ENST00000542428 INTS3Q68E01 1043 aaKnown RBP13.21□□□□□ -0.29
AC009509.3-201ENST00000542428 UBE3BQ7Z3V4 1068 aa13.21□□□□□ -0.29
AC009509.3-201ENST00000542428 ZBTB38Q8NAP3 1195 aaPredicted RBP13.21□□□□□ -0.29
AC009509.3-201ENST00000542428 JARID2Q92833 1246 aaPredicted RBP13.21□□□□□ -0.29
AC009509.3-201ENST00000542428 FAM89AQ96GI7 184 aa13.21□□□□□ -0.29
AC009509.3-201ENST00000542428 TRMT112Q9UI30 125 aaKnown RBP13.21□□□□□ -0.29
AC009509.3-201ENST00000542428 ZNF646O15015 1829 aaPredicted RBP13.2□□□□□ -0.3
AC009509.3-201ENST00000542428 TPTE2Q6XPS3 522 aa13.2□□□□□ -0.3
AC009509.3-201ENST00000542428 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.2□□□□□ -0.3
AC009509.3-201ENST00000542428 FHDC1Q9C0D6 1143 aaPredicted RBP13.2□□□□□ -0.3
AC009509.3-201ENST00000542428 PPP1R1BQ9UD71 204 aaPredicted RBP13.2□□□□□ -0.3
AC009509.3-201ENST00000542428 PSME4Q14997 1843 aa13.2□□□□□ -0.3
AC009509.3-201ENST00000542428 UTYO14607 1347 aa13.19□□□□□ -0.3
AC009509.3-201ENST00000542428 GTF2E1P29083 439 aaPredicted RBP13.19□□□□□ -0.3
AC009509.3-201ENST00000542428 C3orf67Q6ZVT6 689 aa13.19□□□□□ -0.3
AC009509.3-201ENST00000542428 ITPRIPQ8IWB1 547 aa13.19□□□□□ -0.3
AC009509.3-201ENST00000542428 NLGN2Q8NFZ4 835 aa13.19□□□□□ -0.3
AC009509.3-201ENST00000542428 MEIS3Q99687 375 aa13.19□□□□□ -0.3
AC009509.3-201ENST00000542428 CHD4Q14839 1912 aa13.19□□□□□ -0.3
AC009509.3-201ENST00000542428 H7C1W4 665 aa13.18□□□□□ -0.3
AC009509.3-201ENST00000542428 IRS4O14654 1257 aaPredicted RBP13.18□□□□□ -0.3
AC009509.3-201ENST00000542428 NBPF7P0C2Y1 421 aaPredicted RBP13.18□□□□□ -0.3
AC009509.3-201ENST00000542428 HCLS1P14317 486 aaPredicted RBP13.18□□□□□ -0.3
AC009509.3-201ENST00000542428 MVPQ14764 893 aaKnown RBP13.18□□□□□ -0.3
AC009509.3-201ENST00000542428 SUCLG2Q96I99 432 aa13.18□□□□□ -0.3
AC009509.3-201ENST00000542428 COG6Q9Y2V7 657 aa13.18□□□□□ -0.3
AC009509.3-201ENST00000542428 SUPT16HQ9Y5B9 1047 aaKnown RBP13.18□□□□□ -0.3
AC009509.3-201ENST00000542428 CHRNA5P30532 468 aa13.17□□□□□ -0.3
AC009509.3-201ENST00000542428 BRIP1Q9BX63 1249 aa13.17□□□□□ -0.3
AC009509.3-201ENST00000542428 C9orf78Q9NZ63 289 aaPredicted RBP13.17□□□□□ -0.3
AC009509.3-201ENST00000542428 CENPBP07199 599 aaPredicted RBP13.16□□□□□ -0.3
AC009509.3-201ENST00000542428 MS4A1P11836 297 aa13.16□□□□□ -0.3
AC009509.3-201ENST00000542428 CTSWP56202 376 aa13.16□□□□□ -0.3
AC009509.3-201ENST00000542428 PDE3AQ14432 1141 aa13.16□□□□□ -0.3
AC009509.3-201ENST00000542428 CRY2Q49AN0 593 aa13.16□□□□□ -0.3
AC009509.3-201ENST00000542428 USP44Q9H0E7 712 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms