RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 MYH3P11055 1940 aa25.06■■□□□ 1.6
SMPDL3A-203ENST00000539041 ADAMTS2O95450 1211 aa25.06■■□□□ 1.6
SMPDL3A-203ENST00000539041 FOXO4P98177 505 aa25.06■■□□□ 1.6
SMPDL3A-203ENST00000539041 IL25Q9H293 177 aa25.06■■□□□ 1.6
SMPDL3A-203ENST00000539041 THRAP3Q9Y2W1 955 aaKnown RBP25.06■■□□□ 1.6
SMPDL3A-203ENST00000539041 SPATA31A1Q5TZJ5 1347 aa25.06■■□□□ 1.6
SMPDL3A-203ENST00000539041 EVI5LQ96CN4 794 aa25.05■■□□□ 1.6
SMPDL3A-203ENST00000539041 IL17RAQ96F46 866 aa25.05■■□□□ 1.6
SMPDL3A-203ENST00000539041 ISCA1Q9BUE6 129 aa25.05■■□□□ 1.6
SMPDL3A-203ENST00000539041 LMBR1LQ6UX01 489 aa25.05■■□□□ 1.6
SMPDL3A-203ENST00000539041 KIF6Q6ZMV9 814 aa25.04■■□□□ 1.6
SMPDL3A-203ENST00000539041 TCIRG1Q13488 830 aa25.03■■□□□ 1.6
SMPDL3A-203ENST00000539041 RUFY2Q8WXA3 655 aa25.03■■□□□ 1.6
SMPDL3A-203ENST00000539041 DIAPH3Q9NSV4 1193 aa25.03■■□□□ 1.6
SMPDL3A-203ENST00000539041 FOXD4L1Q9NU39 408 aa25.03■■□□□ 1.6
SMPDL3A-203ENST00000539041 TLR7Q9NYK1 1049 aaKnown RBP25.03■■□□□ 1.6
SMPDL3A-203ENST00000539041 PALD1Q9ULE6 856 aa25.03■■□□□ 1.6
SMPDL3A-203ENST00000539041 RAD50Q92878 1312 aa25.03■■□□□ 1.6
SMPDL3A-203ENST00000539041 ZNF330Q9Y3S2 320 aaPredicted RBP25.02■■□□□ 1.6
SMPDL3A-203ENST00000539041 HSPA4P34932 840 aa25.01■■□□□ 1.59
SMPDL3A-203ENST00000539041 TFCP2Q12800 502 aa25.01■■□□□ 1.59
SMPDL3A-203ENST00000539041 CWC27Q6UX04 472 aaKnown RBP25.01■■□□□ 1.59
SMPDL3A-203ENST00000539041 CHMP3Q9Y3E7 222 aa25.01■■□□□ 1.59
SMPDL3A-203ENST00000539041 CICQ96RK0 1608 aaPredicted RBP25.01■■□□□ 1.59
SMPDL3A-203ENST00000539041 TOM1O60784 492 aa25■■□□□ 1.59
SMPDL3A-203ENST00000539041 MCM4P33991 863 aa25■■□□□ 1.59
SMPDL3A-203ENST00000539041 TNNI3KQ59H18 835 aa25■■□□□ 1.59
SMPDL3A-203ENST00000539041 LSG1Q9H089 658 aaKnown RBP25■■□□□ 1.59
SMPDL3A-203ENST00000539041 FPGT-TNNI3KV9GXZ4 949 aa25■■□□□ 1.59
SMPDL3A-203ENST00000539041 SLIT2O94813 1529 aa25■■□□□ 1.59
SMPDL3A-203ENST00000539041 TRIM28Q13263 835 aaKnown RBP25■■□□□ 1.59
SMPDL3A-203ENST00000539041 KIAA1211Q6ZU35 1233 aa25■■□□□ 1.59
SMPDL3A-203ENST00000539041 SYTL4Q96C24 671 aaPredicted RBP25■■□□□ 1.59
SMPDL3A-203ENST00000539041 HIP1O00291 1037 aa24.99■■□□□ 1.59
SMPDL3A-203ENST00000539041 CYP19A1P11511 503 aaPredicted RBP24.99■■□□□ 1.59
SMPDL3A-203ENST00000539041 NEK4P51957 841 aa24.99■■□□□ 1.59
SMPDL3A-203ENST00000539041 RAB3GAP1Q15042 981 aa24.99■■□□□ 1.59
SMPDL3A-203ENST00000539041 DDB1Q16531 1140 aa24.99■■□□□ 1.59
SMPDL3A-203ENST00000539041 SLC4A9Q96Q91 983 aa24.99■■□□□ 1.59
SMPDL3A-203ENST00000539041 MAP3K15Q6ZN16 1313 aa24.99■■□□□ 1.59
SMPDL3A-203ENST00000539041 NUTM2BA6NNL0 878 aaPredicted RBP24.98■■□□□ 1.59
SMPDL3A-203ENST00000539041 NUTM2EB1AL46 878 aaPredicted RBP24.98■■□□□ 1.59
SMPDL3A-203ENST00000539041 MCM2P49736 904 aa24.98■■□□□ 1.59
SMPDL3A-203ENST00000539041 NUTM2AQ8IVF1 878 aaPredicted RBP24.98■■□□□ 1.59
SMPDL3A-203ENST00000539041 IL27Q8NEV9 243 aa24.98■■□□□ 1.59
SMPDL3A-203ENST00000539041 SPATA31A5Q5VU36 1347 aa24.98■■□□□ 1.59
SMPDL3A-203ENST00000539041 SPATA31A7Q8IWB4 1347 aa24.98■■□□□ 1.59
SMPDL3A-203ENST00000539041 RREB1Q92766 1687 aa24.98■■□□□ 1.59
SMPDL3A-203ENST00000539041 PRIM1P49642 420 aaKnown RBP24.98■■□□□ 1.59
SMPDL3A-203ENST00000539041 GSE1Q14687 1217 aa24.98■■□□□ 1.59
SMPDL3A-203ENST00000539041 PIP4K2BP78356 416 aa24.97■■□□□ 1.59
SMPDL3A-203ENST00000539041 BOLA2Q9H3K6 86 aa24.97■■□□□ 1.59
SMPDL3A-203ENST00000539041 DBNLQ9UJU6 430 aaKnown RBP24.96■■□□□ 1.59
SMPDL3A-203ENST00000539041 PCCAP05165 728 aaPredicted RBP24.95■■□□□ 1.59
SMPDL3A-203ENST00000539041 ATP5JP18859 108 aa24.95■■□□□ 1.59
SMPDL3A-203ENST00000539041 GIGYF2Q6Y7W6 1299 aaKnown RBP24.95■■□□□ 1.59
SMPDL3A-203ENST00000539041 TNPO1Q92973 898 aaKnown RBP24.95■■□□□ 1.59
SMPDL3A-203ENST00000539041 HSP90AB3PQ58FF7 597 aa24.94■■□□□ 1.58
SMPDL3A-203ENST00000539041 ATG9AQ7Z3C6 839 aa24.94■■□□□ 1.58
SMPDL3A-203ENST00000539041 IL15P40933 162 aaPredicted RBP24.93■■□□□ 1.58
SMPDL3A-203ENST00000539041 BARGINQ6ZT62 677 aa24.93■■□□□ 1.58
SMPDL3A-203ENST00000539041 FSD1Q9BTV5 496 aa24.93■■□□□ 1.58
SMPDL3A-203ENST00000539041 CWC22Q9HCG8 908 aaKnown RBP24.93■■□□□ 1.58
SMPDL3A-203ENST00000539041 GPR108Q9NPR9 543 aa24.93■■□□□ 1.58
SMPDL3A-203ENST00000539041 ZBTB1Q9Y2K1 713 aa24.93■■□□□ 1.58
SMPDL3A-203ENST00000539041 ARXQ96QS3 562 aa24.93■■□□□ 1.58
SMPDL3A-203ENST00000539041 PLA2G12BQ9BX93 195 aa24.93■■□□□ 1.58
SMPDL3A-203ENST00000539041 SPEF2Q9C093 1822 aa24.92■■□□□ 1.58
SMPDL3A-203ENST00000539041 DDX11L8A8MPP1 907 aa24.92■■□□□ 1.58
SMPDL3A-203ENST00000539041 GBP4Q96PP9 640 aa24.92■■□□□ 1.58
SMPDL3A-203ENST00000539041 DBNDD2Q9BQY9 259 aa24.92■■□□□ 1.58
SMPDL3A-203ENST00000539041 SNX14Q9Y5W7 946 aa24.92■■□□□ 1.58
SMPDL3A-203ENST00000539041 EYA2O00167 538 aa24.91■■□□□ 1.58
SMPDL3A-203ENST00000539041 ZNF609O15014 1411 aa24.91■■□□□ 1.58
SMPDL3A-203ENST00000539041 CIAO1O76071 339 aa24.91■■□□□ 1.58
SMPDL3A-203ENST00000539041 NMIQ13287 307 aaPredicted RBP24.91■■□□□ 1.58
SMPDL3A-203ENST00000539041 RFX7Q2KHR2 1363 aa24.91■■□□□ 1.58
SMPDL3A-203ENST00000539041 ZBTB38Q8NAP3 1195 aaPredicted RBP24.91■■□□□ 1.58
SMPDL3A-203ENST00000539041 COL5A3P25940 1745 aaPredicted RBP24.91■■□□□ 1.58
SMPDL3A-203ENST00000539041 CDHR2Q9BYE9 1310 aa24.9■■□□□ 1.58
SMPDL3A-203ENST00000539041 IL6STP40189 918 aaPredicted RBP24.9■■□□□ 1.58
SMPDL3A-203ENST00000539041 MARCH10Q8NA82 808 aaPredicted RBP24.9■■□□□ 1.58
SMPDL3A-203ENST00000539041 SNRKQ9NRH2 765 aa24.9■■□□□ 1.58
SMPDL3A-203ENST00000539041 CCDC9Q9Y3X0 531 aaKnown RBP24.9■■□□□ 1.58
SMPDL3A-203ENST00000539041 MYH14Q7Z406 1995 aaKnown RBP24.9■■□□□ 1.58
SMPDL3A-203ENST00000539041 HLFQ16534 295 aa24.9■■□□□ 1.58
SMPDL3A-203ENST00000539041 TMX3Q96JJ7 454 aa24.9■■□□□ 1.58
SMPDL3A-203ENST00000539041 CCDC171Q6TFL3 1326 aa24.89■■□□□ 1.58
SMPDL3A-203ENST00000539041 NUCB2P80303 420 aa24.89■■□□□ 1.57
SMPDL3A-203ENST00000539041 PTH1RQ03431 593 aa24.89■■□□□ 1.57
SMPDL3A-203ENST00000539041 ZNF831Q5JPB2 1677 aa24.89■■□□□ 1.57
SMPDL3A-203ENST00000539041 ZNF594Q96JF6 807 aaPredicted RBP24.88■■□□□ 1.57
SMPDL3A-203ENST00000539041 FAM227BQ96M60 508 aa24.88■■□□□ 1.57
SMPDL3A-203ENST00000539041 UPF3BQ9BZI7 483 aaKnown RBP24.88■■□□□ 1.57
SMPDL3A-203ENST00000539041 FBXO3Q9UK99 471 aa24.88■■□□□ 1.57
SMPDL3A-203ENST00000539041 ERVV-1B6SEH8 477 aa24.88■■□□□ 1.57
SMPDL3A-203ENST00000539041 SSFA2P28290 1259 aa24.88■■□□□ 1.57
SMPDL3A-203ENST00000539041 CCDC57Q2TAC2 916 aa24.88■■□□□ 1.57
SMPDL3A-203ENST00000539041 LRRC24Q50LG9 513 aa24.88■■□□□ 1.57
SMPDL3A-203ENST00000539041 NLRP10Q86W26 655 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms