RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 CWC25Q9NXE8 425 aaPredicted RBP18.08■□□□□ 0.49
COLCA2-202ENST00000526216 NARFQ9UHQ1 456 aa18.08■□□□□ 0.49
COLCA2-202ENST00000526216 H7C1W4 665 aa18.07■□□□□ 0.48
COLCA2-202ENST00000526216 HOXD11P31277 338 aaPredicted RBP18.07■□□□□ 0.48
COLCA2-202ENST00000526216 HSP90AB3PQ58FF7 597 aa18.07■□□□□ 0.48
COLCA2-202ENST00000526216 NPM2Q86SE8 214 aaKnown RBP18.07■□□□□ 0.48
COLCA2-202ENST00000526216 NLRP10Q86W26 655 aa18.07■□□□□ 0.48
COLCA2-202ENST00000526216 C9orf78Q9NZ63 289 aaPredicted RBP18.07■□□□□ 0.48
COLCA2-202ENST00000526216 PHF14O94880 888 aa18.06■□□□□ 0.48
COLCA2-202ENST00000526216 EPHA10Q5JZY3 1008 aa18.06■□□□□ 0.48
COLCA2-202ENST00000526216 USPL1Q5W0Q7 1092 aa18.06■□□□□ 0.48
COLCA2-202ENST00000526216 DEFB132Q7Z7B7 95 aa18.06■□□□□ 0.48
COLCA2-202ENST00000526216 COL24A1Q17RW2 1714 aa18.06■□□□□ 0.48
COLCA2-202ENST00000526216 USP42Q9H9J4 1324 aaKnown RBP18.06■□□□□ 0.48
COLCA2-202ENST00000526216 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.05■□□□□ 0.48
COLCA2-202ENST00000526216 CENPQQ7L2Z9 268 aaPredicted RBP18.05■□□□□ 0.48
COLCA2-202ENST00000526216 UBE3BQ7Z3V4 1068 aa18.05■□□□□ 0.48
COLCA2-202ENST00000526216 RPAP2Q8IXW5 612 aaPredicted RBP18.05■□□□□ 0.48
COLCA2-202ENST00000526216 ANO8Q9HCE9 1232 aaPredicted RBP18.05■□□□□ 0.48
COLCA2-202ENST00000526216 PNMA6EA0A0J9YXQ4 647 aa18.04■□□□□ 0.48
COLCA2-202ENST00000526216 SSFA2P28290 1259 aa18.04■□□□□ 0.48
COLCA2-202ENST00000526216 TRAPPC3LQ5T215 181 aa18.04■□□□□ 0.48
COLCA2-202ENST00000526216 RWDD1Q9H446 243 aaPredicted RBP18.04■□□□□ 0.48
COLCA2-202ENST00000526216 RGL2O15211 777 aa18.03■□□□□ 0.48
COLCA2-202ENST00000526216 ATP8B2P98198 1209 aa18.03■□□□□ 0.48
COLCA2-202ENST00000526216 CLEC4GQ6UXB4 293 aa18.03■□□□□ 0.48
COLCA2-202ENST00000526216 BICC1Q9H694 974 aaKnown RBP18.03■□□□□ 0.48
COLCA2-202ENST00000526216 PCCAP05165 728 aaPredicted RBP18.02■□□□□ 0.48
COLCA2-202ENST00000526216 BAG6P46379 1132 aa18.02■□□□□ 0.48
COLCA2-202ENST00000526216 RTL5Q5HYW3 569 aaPredicted RBP18.02■□□□□ 0.48
COLCA2-202ENST00000526216 SUSD4Q5VX71 490 aa18.02■□□□□ 0.48
COLCA2-202ENST00000526216 TBC1D9BQ66K14 1250 aa18.02■□□□□ 0.48
COLCA2-202ENST00000526216 SKAP1Q86WV1 359 aa18.02■□□□□ 0.48
COLCA2-202ENST00000526216 SYNE4Q8N205 404 aa18.02■□□□□ 0.48
COLCA2-202ENST00000526216 MTX1Q13505 466 aa18.01■□□□□ 0.47
COLCA2-202ENST00000526216 POLA2Q14181 598 aa18.01■□□□□ 0.47
COLCA2-202ENST00000526216 PPP1R42Q7Z4L9 355 aa18.01■□□□□ 0.47
COLCA2-202ENST00000526216 SMC5Q8IY18 1101 aa18.01■□□□□ 0.47
COLCA2-202ENST00000526216 NIP7Q9Y221 180 aaKnown RBP eCLIP18.01■□□□□ 0.47
COLCA2-202ENST00000526216 ZNF652Q9Y2D9 606 aa18.01■□□□□ 0.47
COLCA2-202ENST00000526216 QSER1Q2KHR3 1735 aa18.01■□□□□ 0.47
COLCA2-202ENST00000526216 DDX60Q8IY21 1712 aaKnown RBP18.01■□□□□ 0.47
COLCA2-202ENST00000526216 NTSR2O95665 410 aa18■□□□□ 0.47
COLCA2-202ENST00000526216 RFC4P35249 363 aa18■□□□□ 0.47
COLCA2-202ENST00000526216 FOXO4P98177 505 aa18■□□□□ 0.47
COLCA2-202ENST00000526216 SF3B2Q13435 895 aaKnown RBP18■□□□□ 0.47
COLCA2-202ENST00000526216 ZBTB38Q8NAP3 1195 aaPredicted RBP18■□□□□ 0.47
COLCA2-202ENST00000526216 SSH3Q8TE77 659 aa18■□□□□ 0.47
COLCA2-202ENST00000526216 FAM89AQ96GI7 184 aa18■□□□□ 0.47
COLCA2-202ENST00000526216 PNPLA7Q6ZV29 1317 aa18■□□□□ 0.47
COLCA2-202ENST00000526216 CDHR2Q9BYE9 1310 aa18■□□□□ 0.47
COLCA2-202ENST00000526216 LAMB2P55268 1798 aa18■□□□□ 0.47
COLCA2-202ENST00000526216 ZPR1O75312 459 aa17.99■□□□□ 0.47
COLCA2-202ENST00000526216 RABL6Q3YEC7 729 aaPredicted RBP17.99■□□□□ 0.47
COLCA2-202ENST00000526216 COL23A1Q86Y22 540 aaPredicted RBP17.99■□□□□ 0.47
COLCA2-202ENST00000526216 GYS1P13807 737 aa17.98■□□□□ 0.47
COLCA2-202ENST00000526216 PARP10Q53GL7 1025 aa17.98■□□□□ 0.47
COLCA2-202ENST00000526216 DCTPP1Q9H773 170 aa17.98■□□□□ 0.47
COLCA2-202ENST00000526216 TFCP2L1Q9NZI6 479 aa17.98■□□□□ 0.47
COLCA2-202ENST00000526216 TRMT112Q9UI30 125 aaKnown RBP17.98■□□□□ 0.47
COLCA2-202ENST00000526216 FAM177BA6PVY3 158 aa17.98■□□□□ 0.47
COLCA2-202ENST00000526216 HMGB2P26583 209 aaKnown RBP17.98■□□□□ 0.47
COLCA2-202ENST00000526216 BICDL1Q6ZP65 573 aa17.98■□□□□ 0.47
COLCA2-202ENST00000526216 PLA2G12BQ9BX93 195 aa17.98■□□□□ 0.47
COLCA2-202ENST00000526216 SRGAP3O43295 1099 aa17.97■□□□□ 0.47
COLCA2-202ENST00000526216 SLC15A2Q16348 729 aa17.97■□□□□ 0.47
COLCA2-202ENST00000526216 CCDC125Q86Z20 511 aa17.97■□□□□ 0.47
COLCA2-202ENST00000526216 UPF1Q92900 1129 aaKnown RBP eCLIP17.97■□□□□ 0.47
COLCA2-202ENST00000526216 UTP14AQ9BVJ6 771 aaKnown RBP17.97■□□□□ 0.47
COLCA2-202ENST00000526216 PDZRN3Q9UPQ7 1066 aa17.97■□□□□ 0.47
COLCA2-202ENST00000526216 HDAC5Q9UQL6 1122 aa17.97■□□□□ 0.47
COLCA2-202ENST00000526216 HMMRO75330 724 aa17.96■□□□□ 0.46
COLCA2-202ENST00000526216 RFX5P48382 616 aaPredicted RBP17.96■□□□□ 0.46
COLCA2-202ENST00000526216 NFIXQ14938 502 aa17.96■□□□□ 0.46
COLCA2-202ENST00000526216 LMBR1LQ6UX01 489 aa17.96■□□□□ 0.46
COLCA2-202ENST00000526216 ABCC12Q96J65 1359 aa17.95■□□□□ 0.46
COLCA2-202ENST00000526216 CASZ1Q86V15 1759 aa17.95■□□□□ 0.46
COLCA2-202ENST00000526216 IRS4O14654 1257 aaPredicted RBP17.95■□□□□ 0.46
COLCA2-202ENST00000526216 NUTM1Q86Y26 1132 aa17.95■□□□□ 0.46
COLCA2-202ENST00000526216 GCC1Q96CN9 775 aa17.95■□□□□ 0.46
COLCA2-202ENST00000526216 SH3TC1Q8TE82 1336 aa17.95■□□□□ 0.46
COLCA2-202ENST00000526216 TM4SF1P30408 202 aa17.94■□□□□ 0.46
COLCA2-202ENST00000526216 STK32BQ9NY57 414 aa17.94■□□□□ 0.46
COLCA2-202ENST00000526216 PA2G4Q9UQ80 394 aaKnown RBP17.94■□□□□ 0.46
COLCA2-202ENST00000526216 EXOC6BQ9Y2D4 811 aa17.94■□□□□ 0.46
COLCA2-202ENST00000526216 MYH3P11055 1940 aa17.93■□□□□ 0.46
COLCA2-202ENST00000526216 TNRC6CQ9HCJ0 1690 aaKnown RBP17.93■□□□□ 0.46
COLCA2-202ENST00000526216 CSF1RP07333 972 aa17.93■□□□□ 0.46
COLCA2-202ENST00000526216 HCLS1P14317 486 aaPredicted RBP17.93■□□□□ 0.46
COLCA2-202ENST00000526216 PDE4AP27815 886 aa17.93■□□□□ 0.46
COLCA2-202ENST00000526216 NUCB1Q02818 461 aa17.93■□□□□ 0.46
COLCA2-202ENST00000526216 ERFEQ4G0M1 354 aa17.93■□□□□ 0.46
COLCA2-202ENST00000526216 KLHDC4Q8TBB5 520 aa17.93■□□□□ 0.46
COLCA2-202ENST00000526216 SETDB2Q96T68 719 aa17.93■□□□□ 0.46
COLCA2-202ENST00000526216 DDR1Q08345 913 aa17.92■□□□□ 0.46
COLCA2-202ENST00000526216 C3orf67Q6ZVT6 689 aa17.92■□□□□ 0.46
COLCA2-202ENST00000526216 FLAD1Q8NFF5 587 aa17.92■□□□□ 0.46
COLCA2-202ENST00000526216 NOP58Q9Y2X3 529 aaKnown RBP17.92■□□□□ 0.46
COLCA2-202ENST00000526216 CARMIL3Q8ND23 1372 aa17.92■□□□□ 0.46
COLCA2-202ENST00000526216 COL4A1P02462 1669 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms