RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 WDR90Q96KV7 1748 aa10.96□□□□□ -0.65
NEDD8-203ENST00000524927 LORP23490 312 aaPredicted RBP10.96□□□□□ -0.65
NEDD8-203ENST00000524927 PDE3BQ13370 1112 aa10.96□□□□□ -0.65
NEDD8-203ENST00000524927 ZNF526Q8TF50 670 aaPredicted RBP10.96□□□□□ -0.65
NEDD8-203ENST00000524927 SERPINA10Q9UK55 444 aa10.96□□□□□ -0.65
NEDD8-203ENST00000524927 PER1O15534 1290 aaPredicted RBP10.95□□□□□ -0.66
NEDD8-203ENST00000524927 TOMM70O94826 608 aa10.95□□□□□ -0.66
NEDD8-203ENST00000524927 DESI1Q6ICB0 168 aa10.95□□□□□ -0.66
NEDD8-203ENST00000524927 SPATA31A1Q5TZJ5 1347 aa10.94□□□□□ -0.66
NEDD8-203ENST00000524927 NR6A1Q15406 480 aa10.94□□□□□ -0.66
NEDD8-203ENST00000524927 EHBP1Q8NDI1 1231 aa10.94□□□□□ -0.66
NEDD8-203ENST00000524927 EPS8L1Q8TE68 723 aa10.94□□□□□ -0.66
NEDD8-203ENST00000524927 STK32BQ9NY57 414 aa10.94□□□□□ -0.66
NEDD8-203ENST00000524927 TNS3Q68CZ2 1445 aa10.93□□□□□ -0.66
NEDD8-203ENST00000524927 VEGFBP49765 207 aa10.93□□□□□ -0.66
NEDD8-203ENST00000524927 SLC15A2Q16348 729 aa10.93□□□□□ -0.66
NEDD8-203ENST00000524927 WASHC4Q2M389 1173 aa10.93□□□□□ -0.66
NEDD8-203ENST00000524927 KRT28Q7Z3Y7 464 aa10.93□□□□□ -0.66
NEDD8-203ENST00000524927 KIFC2Q96AC6 838 aa10.93□□□□□ -0.66
NEDD8-203ENST00000524927 CALR3Q96L12 384 aaKnown RBP10.93□□□□□ -0.66
NEDD8-203ENST00000524927 ABCA3Q99758 1704 aa10.92□□□□□ -0.66
NEDD8-203ENST00000524927 ROBO2Q9HCK4 1378 aa10.92□□□□□ -0.66
NEDD8-203ENST00000524927 CDC42BPGQ6DT37 1551 aa10.92□□□□□ -0.66
NEDD8-203ENST00000524927 POM121CA8CG34 1229 aa10.92□□□□□ -0.66
NEDD8-203ENST00000524927 YBX3P16989 372 aaKnown RBP eCLIP10.92□□□□□ -0.66
NEDD8-203ENST00000524927 IRF5Q13568 498 aa10.92□□□□□ -0.66
NEDD8-203ENST00000524927 LYPD8Q6UX82 237 aa10.92□□□□□ -0.66
NEDD8-203ENST00000524927 COL14A1Q05707 1796 aaKnown RBP10.92□□□□□ -0.66
NEDD8-203ENST00000524927 PRAG1Q86YV5 1406 aa10.92□□□□□ -0.66
NEDD8-203ENST00000524927 CAPN5O15484 640 aaPredicted RBP10.91□□□□□ -0.66
NEDD8-203ENST00000524927 HSPA1AP0DMV8 641 aaKnown RBP10.91□□□□□ -0.66
NEDD8-203ENST00000524927 HSPA1BP0DMV9 641 aaKnown RBP10.91□□□□□ -0.66
NEDD8-203ENST00000524927 GMPRP36959 345 aa10.91□□□□□ -0.66
NEDD8-203ENST00000524927 LINC01559Q495D7 138 aa10.91□□□□□ -0.66
NEDD8-203ENST00000524927 BAP1Q92560 729 aa10.91□□□□□ -0.66
NEDD8-203ENST00000524927 HFM1A2PYH4 1435 aa10.91□□□□□ -0.66
NEDD8-203ENST00000524927 ARHGEF10O15013 1369 aa10.9□□□□□ -0.66
NEDD8-203ENST00000524927 PSME1Q06323 249 aa10.9□□□□□ -0.66
NEDD8-203ENST00000524927 PNMA1Q8ND90 353 aa10.9□□□□□ -0.66
NEDD8-203ENST00000524927 RRP7BPQ9NSQ0 103 aa10.9□□□□□ -0.66
NEDD8-203ENST00000524927 NXF1Q9UBU9 619 aaKnown RBP10.9□□□□□ -0.66
NEDD8-203ENST00000524927 TLL2Q9Y6L7 1015 aa10.9□□□□□ -0.66
NEDD8-203ENST00000524927 CCNYL3P0C7X3 344 aa10.89□□□□□ -0.67
NEDD8-203ENST00000524927 MLLT1Q03111 559 aaPredicted RBP10.89□□□□□ -0.67
NEDD8-203ENST00000524927 UNC93B1Q9H1C4 597 aa10.89□□□□□ -0.67
NEDD8-203ENST00000524927 EVA1BQ9NVM1 165 aa10.89□□□□□ -0.67
NEDD8-203ENST00000524927 VAC14Q08AM6 782 aa10.88□□□□□ -0.67
NEDD8-203ENST00000524927 GLMNQ92990 594 aa10.88□□□□□ -0.67
NEDD8-203ENST00000524927 WASF2Q9Y6W5 498 aa10.88□□□□□ -0.67
NEDD8-203ENST00000524927 SBNO1A3KN83 1393 aa10.88□□□□□ -0.67
NEDD8-203ENST00000524927 IQGAP3Q86VI3 1631 aa10.87□□□□□ -0.67
NEDD8-203ENST00000524927 ERBB4Q15303 1308 aa10.87□□□□□ -0.67
NEDD8-203ENST00000524927 HTRA3P83110 453 aa10.87□□□□□ -0.67
NEDD8-203ENST00000524927 NLGN2Q8NFZ4 835 aa10.87□□□□□ -0.67
NEDD8-203ENST00000524927 ZFP42Q96MM3 310 aa10.87□□□□□ -0.67
NEDD8-203ENST00000524927 KIF1AQ12756 1690 aa10.87□□□□□ -0.67
NEDD8-203ENST00000524927 DHX57Q6P158 1386 aaKnown RBP10.87□□□□□ -0.67
NEDD8-203ENST00000524927 CTHP32929 405 aa10.86□□□□□ -0.67
NEDD8-203ENST00000524927 HDGFL1Q5TGJ6 251 aa10.86□□□□□ -0.67
NEDD8-203ENST00000524927 GPR37L1O60883 481 aa10.85□□□□□ -0.67
NEDD8-203ENST00000524927 POLD1P28340 1107 aa10.85□□□□□ -0.67
NEDD8-203ENST00000524927 PTPRNQ16849 979 aa10.85□□□□□ -0.67
NEDD8-203ENST00000524927 MYOM3Q5VTT5 1437 aa10.84□□□□□ -0.67
NEDD8-203ENST00000524927 RGS19P49795 217 aa10.84□□□□□ -0.67
NEDD8-203ENST00000524927 KCNH2Q12809 1159 aa10.84□□□□□ -0.67
NEDD8-203ENST00000524927 KIAA1210Q9ULL0 1709 aa10.84□□□□□ -0.67
NEDD8-203ENST00000524927 SOBPA7XYQ1 873 aa10.83□□□□□ -0.68
NEDD8-203ENST00000524927 FSTL1Q12841 308 aa10.83□□□□□ -0.68
NEDD8-203ENST00000524927 TXNRD1Q16881 649 aa10.83□□□□□ -0.68
NEDD8-203ENST00000524927 OVOS2A0A0G2JMS6 1433 aa10.83□□□□□ -0.68
NEDD8-203ENST00000524927 OVOS2A0A0J9YW53 1432 aa10.83□□□□□ -0.68
NEDD8-203ENST00000524927 TECPR2O15040 1411 aa10.83□□□□□ -0.68
NEDD8-203ENST00000524927 OVOS2Q6IE36 1432 aa10.83□□□□□ -0.68
NEDD8-203ENST00000524927 USP19O94966 1318 aa10.83□□□□□ -0.68
NEDD8-203ENST00000524927 ZNF511Q8NB15 262 aa10.82□□□□□ -0.68
NEDD8-203ENST00000524927 SLC16A10Q8TF71 515 aa10.82□□□□□ -0.68
NEDD8-203ENST00000524927 MAP10Q9P2G4 905 aa10.82□□□□□ -0.68
NEDD8-203ENST00000524927 ARHGEF28Q8N1W1 1705 aaKnown RBP10.81□□□□□ -0.68
NEDD8-203ENST00000524927 TULP4Q9NRJ4 1543 aa10.81□□□□□ -0.68
NEDD8-203ENST00000524927 H3BM21 787 aa10.81□□□□□ -0.68
NEDD8-203ENST00000524927 KLF16Q9BXK1 252 aaPredicted RBP10.81□□□□□ -0.68
NEDD8-203ENST00000524927 FKBPLQ9UIM3 349 aa10.81□□□□□ -0.68
NEDD8-203ENST00000524927 F12P00748 615 aaPredicted RBP10.8□□□□□ -0.68
NEDD8-203ENST00000524927 SEMA3FQ13275 785 aa10.8□□□□□ -0.68
NEDD8-203ENST00000524927 PRDM11Q9NQV5 511 aa10.8□□□□□ -0.68
NEDD8-203ENST00000524927 PRDM10Q9NQV6 1147 aa10.8□□□□□ -0.68
NEDD8-203ENST00000524927 NAIPQ13075 1403 aa10.8□□□□□ -0.68
NEDD8-203ENST00000524927 COL24A1Q17RW2 1714 aa10.79□□□□□ -0.68
NEDD8-203ENST00000524927 PEAK1Q9H792 1746 aa10.79□□□□□ -0.68
NEDD8-203ENST00000524927 FAM181BA6NEQ2 426 aa10.79□□□□□ -0.68
NEDD8-203ENST00000524927 TIMP2P16035 220 aa10.79□□□□□ -0.68
NEDD8-203ENST00000524927 NNTQ13423 1086 aa10.79□□□□□ -0.68
NEDD8-203ENST00000524927 ADAMTS19Q8TE59 1207 aa10.79□□□□□ -0.68
NEDD8-203ENST00000524927 SOX11P35716 441 aa10.78□□□□□ -0.68
NEDD8-203ENST00000524927 EIF4G2P78344 907 aaKnown RBP eCLIP10.78□□□□□ -0.68
NEDD8-203ENST00000524927 TCP11L2Q8N4U5 519 aa10.78□□□□□ -0.68
NEDD8-203ENST00000524927 USP35Q9P2H5 1018 aa10.78□□□□□ -0.68
NEDD8-203ENST00000524927 SBF2Q86WG5 1849 aa10.78□□□□□ -0.68
NEDD8-203ENST00000524927 VARSP26640 1264 aaKnown RBP10.77□□□□□ -0.69
NEDD8-203ENST00000524927 NR1H3Q13133 447 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms