RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 ERVH48-1M5A8F1 160 aa9.76□□□□□ -0.85
CLK4-202ENST00000519132 OSBPL7Q9BZF2 842 aa9.76□□□□□ -0.85
CLK4-202ENST00000519132 G3BP2Q9UN86 482 aaKnown RBP9.76□□□□□ -0.85
CLK4-202ENST00000519132 MMP16P51512 607 aa9.75□□□□□ -0.85
CLK4-202ENST00000519132 PCGF6Q9BYE7 350 aa9.75□□□□□ -0.85
CLK4-202ENST00000519132 OSBPL3Q9H4L5 887 aa9.75□□□□□ -0.85
CLK4-202ENST00000519132 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.75□□□□□ -0.85
CLK4-202ENST00000519132 PAK2Q13177 524 aa9.75□□□□□ -0.85
CLK4-202ENST00000519132 CRELD1Q96HD1 420 aa9.75□□□□□ -0.85
CLK4-202ENST00000519132 GPATCH8Q9UKJ3 1502 aaKnown RBP9.75□□□□□ -0.85
CLK4-202ENST00000519132 ABCA9Q8IUA7 1624 aa9.74□□□□□ -0.85
CLK4-202ENST00000519132 CDC42BPBQ9Y5S2 1711 aa9.74□□□□□ -0.85
CLK4-202ENST00000519132 TTC37Q6PGP7 1564 aa9.74□□□□□ -0.85
CLK4-202ENST00000519132 RBM10P98175 930 aaKnown RBP9.74□□□□□ -0.85
CLK4-202ENST00000519132 ARAP3Q8WWN8 1544 aa9.74□□□□□ -0.85
CLK4-202ENST00000519132 PEX14O75381 377 aa9.73□□□□□ -0.85
CLK4-202ENST00000519132 ZNF511Q8NB15 262 aa9.73□□□□□ -0.85
CLK4-202ENST00000519132 ARMC2Q8NEN0 867 aa9.73□□□□□ -0.85
CLK4-202ENST00000519132 EDEM1Q92611 657 aa9.73□□□□□ -0.85
CLK4-202ENST00000519132 GPKOWQ92917 476 aaPredicted RBP eCLIP9.73□□□□□ -0.852e-6■■■■■ 29.1
CLK4-202ENST00000519132 USP20Q9Y2K6 914 aa9.73□□□□□ -0.85
CLK4-202ENST00000519132 FOXO3O43524 673 aa9.73□□□□□ -0.85
CLK4-202ENST00000519132 MAP4K4O95819 1239 aaPredicted RBP9.73□□□□□ -0.85
CLK4-202ENST00000519132 ATP2B2Q01814 1243 aa9.73□□□□□ -0.85
CLK4-202ENST00000519132 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.73□□□□□ -0.85
CLK4-202ENST00000519132 RPUSD2Q8IZ73 545 aaKnown RBP9.73□□□□□ -0.85
CLK4-202ENST00000519132 EPS8L3Q8TE67 593 aaKnown RBP9.73□□□□□ -0.85
CLK4-202ENST00000519132 STAG1Q8WVM7 1258 aa9.73□□□□□ -0.85
CLK4-202ENST00000519132 KCNB2Q92953 911 aa9.73□□□□□ -0.85
CLK4-202ENST00000519132 ASXL2Q76L83 1435 aa9.73□□□□□ -0.85
CLK4-202ENST00000519132 ZBTB24O43167 697 aaPredicted RBP9.73□□□□□ -0.85
CLK4-202ENST00000519132 SLC9A9Q8IVB4 645 aa9.73□□□□□ -0.85
CLK4-202ENST00000519132 NAP1L5Q96NT1 182 aaPredicted RBP9.73□□□□□ -0.85
CLK4-202ENST00000519132 ATF4P18848 351 aaPredicted RBP9.72□□□□□ -0.85
CLK4-202ENST00000519132 DMRTB1Q96MA1 342 aa9.72□□□□□ -0.85
CLK4-202ENST00000519132 C2orf49Q9BVC5 232 aaPredicted RBP9.72□□□□□ -0.85
CLK4-202ENST00000519132 NLRP2Q9NX02 1062 aa9.72□□□□□ -0.85
CLK4-202ENST00000519132 WBP1LQ9NX94 342 aa9.72□□□□□ -0.85
CLK4-202ENST00000519132 GNL2Q13823 731 aaKnown RBP9.72□□□□□ -0.85
CLK4-202ENST00000519132 ZNF408Q9H9D4 720 aa9.72□□□□□ -0.85
CLK4-202ENST00000519132 IFT57Q9NWB7 429 aa9.72□□□□□ -0.85
CLK4-202ENST00000519132 GABBR1Q9UBS5 961 aa9.72□□□□□ -0.85
CLK4-202ENST00000519132 EIF1AYO14602 144 aaKnown RBP9.71□□□□□ -0.85
CLK4-202ENST00000519132 INTS6LQ5JSJ4 861 aaKnown RBP9.71□□□□□ -0.85
CLK4-202ENST00000519132 MRPL50Q8N5N7 158 aaKnown RBP9.71□□□□□ -0.85
CLK4-202ENST00000519132 GGNBP2Q9H3C7 697 aa9.71□□□□□ -0.85
CLK4-202ENST00000519132 K7ELQ4 463 aaPredicted RBP9.71□□□□□ -0.85
CLK4-202ENST00000519132 C8orf34Q49A92 452 aa9.71□□□□□ -0.85
CLK4-202ENST00000519132 FILIP1Q7Z7B0 1213 aa9.71□□□□□ -0.85
CLK4-202ENST00000519132 STK10O94804 968 aaKnown RBP9.71□□□□□ -0.86
CLK4-202ENST00000519132 PPP4CP60510 307 aa9.71□□□□□ -0.86
CLK4-202ENST00000519132 GJD3Q8N144 294 aa9.71□□□□□ -0.86
CLK4-202ENST00000519132 COL26A1Q96A83 441 aa9.71□□□□□ -0.86
CLK4-202ENST00000519132 KCTD15Q96SI1 283 aaPredicted RBP9.71□□□□□ -0.86
CLK4-202ENST00000519132 MSS51Q4VC12 460 aa9.7□□□□□ -0.86
CLK4-202ENST00000519132 CYB5RLQ6IPT4 315 aa9.7□□□□□ -0.86
CLK4-202ENST00000519132 TRIM56Q9BRZ2 755 aaKnown RBP9.7□□□□□ -0.86
CLK4-202ENST00000519132 DNMT1P26358 1616 aaKnown RBP9.7□□□□□ -0.86
CLK4-202ENST00000519132 FAM221BA6H8Z2 402 aa9.7□□□□□ -0.86
CLK4-202ENST00000519132 IGBP1P78318 339 aa9.7□□□□□ -0.86
CLK4-202ENST00000519132 IRX6P78412 446 aaPredicted RBP9.7□□□□□ -0.86
CLK4-202ENST00000519132 GPR152Q8TDT2 470 aa9.7□□□□□ -0.86
CLK4-202ENST00000519132 MARVELD3Q96A59 401 aa9.7□□□□□ -0.86
CLK4-202ENST00000519132 NBPF3Q9H094 633 aa9.7□□□□□ -0.86
CLK4-202ENST00000519132 BPHLQ86WA6 291 aaPredicted RBP9.69□□□□□ -0.86
CLK4-202ENST00000519132 COL4A3BPQ9Y5P4 624 aa9.69□□□□□ -0.86
CLK4-202ENST00000519132 GLI2P10070 1586 aa9.69□□□□□ -0.86
CLK4-202ENST00000519132 NR1I2O75469 434 aa9.69□□□□□ -0.86
CLK4-202ENST00000519132 ETFBP38117 255 aa9.69□□□□□ -0.86
CLK4-202ENST00000519132 CROCC2H7BZ55 1655 aa9.69□□□□□ -0.86
CLK4-202ENST00000519132 AK5Q9Y6K8 562 aa9.69□□□□□ -0.86
CLK4-202ENST00000519132 PLCH2O75038 1416 aa9.68□□□□□ -0.86
CLK4-202ENST00000519132 CAMSAP2Q08AD1 1489 aa9.68□□□□□ -0.86
CLK4-202ENST00000519132 MCCD1P59942 119 aaPredicted RBP9.68□□□□□ -0.86
CLK4-202ENST00000519132 DGKZQ13574 1117 aa9.68□□□□□ -0.86
CLK4-202ENST00000519132 ALKBH8Q96BT7 664 aaKnown RBP9.68□□□□□ -0.86
CLK4-202ENST00000519132 HCN4Q9Y3Q4 1203 aa9.68□□□□□ -0.86
CLK4-202ENST00000519132 M0R2N6 131 aa9.68□□□□□ -0.86
CLK4-202ENST00000519132 PDGFAP04085 211 aa9.68□□□□□ -0.86
CLK4-202ENST00000519132 INHAP05111 366 aa9.68□□□□□ -0.86
CLK4-202ENST00000519132 NUDT16Q96DE0 195 aaKnown RBP9.68□□□□□ -0.86
CLK4-202ENST00000519132 SAMD9LQ8IVG5 1584 aa9.68□□□□□ -0.86
CLK4-202ENST00000519132 ARHGEF5Q12774 1597 aa9.67□□□□□ -0.86
CLK4-202ENST00000519132 SH3BP2P78314 561 aa9.67□□□□□ -0.86
CLK4-202ENST00000519132 FOXD3Q9UJU5 478 aaPredicted RBP9.67□□□□□ -0.86
CLK4-202ENST00000519132 LOC102724159A0A0B4J2E5 919 aa9.67□□□□□ -0.86
CLK4-202ENST00000519132 ZAP70P43403 619 aa9.67□□□□□ -0.86
CLK4-202ENST00000519132 PWP2Q15269 919 aaKnown RBP9.67□□□□□ -0.86
CLK4-202ENST00000519132 HS2ST1Q7LGA3 356 aa9.67□□□□□ -0.86
CLK4-202ENST00000519132 ZNF516Q92618 1163 aa9.67□□□□□ -0.86
CLK4-202ENST00000519132 RNPC3Q96LT9 517 aaKnown RBP9.67□□□□□ -0.86
CLK4-202ENST00000519132 MAP3K4Q9Y6R4 1608 aa9.67□□□□□ -0.86
CLK4-202ENST00000519132 MYCP01106 439 aaPredicted RBP9.67□□□□□ -0.86
CLK4-202ENST00000519132 RNF20Q5VTR2 975 aa9.67□□□□□ -0.86
CLK4-202ENST00000519132 ZNF654Q8IZM8 581 aa9.67□□□□□ -0.86
CLK4-202ENST00000519132 SCHIP1Q9P0W5 487 aaPredicted RBP9.67□□□□□ -0.86
CLK4-202ENST00000519132 CFAP74Q9C0B2 1584 aa9.66□□□□□ -0.86
CLK4-202ENST00000519132 ZNF784Q8NCA9 323 aaPredicted RBP9.66□□□□□ -0.86
CLK4-202ENST00000519132 PCDH12Q9NPG4 1184 aa9.66□□□□□ -0.86
CLK4-202ENST00000519132 KBTBD4Q9NVX7 518 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms