RNA–Protein interactions for RNA: ENST00000515802.5

SH3BP2-229, Transcript of SH3 domain binding protein 2, humanhuman

TSL 2

Gene SH3BP2, Length 2,247 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-229ENST00000515802 GPATCH3Q96I76 525 aa18.34■□□□□ 0.53
SH3BP2-229ENST00000515802 PALD1Q9ULE6 856 aa18.34■□□□□ 0.53
SH3BP2-229ENST00000515802 EXOC5O00471 708 aa18.34■□□□□ 0.53
SH3BP2-229ENST00000515802 CCDC8Q9H0W5 538 aaPredicted RBP18.34■□□□□ 0.53
SH3BP2-229ENST00000515802 FOXO4P98177 505 aa18.33■□□□□ 0.53
SH3BP2-229ENST00000515802 SGSM2O43147 1006 aa18.33■□□□□ 0.52
SH3BP2-229ENST00000515802 SLC4A9Q96Q91 983 aa18.33■□□□□ 0.52
SH3BP2-229ENST00000515802 BCL11BQ9C0K0 894 aaPredicted RBP18.33■□□□□ 0.52
SH3BP2-229ENST00000515802 FOXD4L1Q9NU39 408 aa18.33■□□□□ 0.52
SH3BP2-229ENST00000515802 LMBR1LQ6UX01 489 aa18.32■□□□□ 0.52
SH3BP2-229ENST00000515802 CCDC191Q8NCU4 936 aa18.32■□□□□ 0.52
SH3BP2-229ENST00000515802 TEX13AQ9BXU3 409 aaPredicted RBP18.32■□□□□ 0.52
SH3BP2-229ENST00000515802 SPATA31A1Q5TZJ5 1347 aa18.32■□□□□ 0.52
SH3BP2-229ENST00000515802 HSP90AA1P07900 732 aaKnown RBP18.31■□□□□ 0.52
SH3BP2-229ENST00000515802 NWD2Q9ULI1 1742 aa18.31■□□□□ 0.52
SH3BP2-229ENST00000515802 CIZ1Q9ULV3 898 aaPredicted RBP18.31■□□□□ 0.52
SH3BP2-229ENST00000515802 ZNF330Q9Y3S2 320 aaPredicted RBP18.31■□□□□ 0.52
SH3BP2-229ENST00000515802 ST18O60284 1047 aa18.3■□□□□ 0.52
SH3BP2-229ENST00000515802 MCCP23508 829 aa18.3■□□□□ 0.52
SH3BP2-229ENST00000515802 IL17RAQ96F46 866 aa18.3■□□□□ 0.52
SH3BP2-229ENST00000515802 EPB41L2O43491 1005 aaKnown RBP18.3■□□□□ 0.52
SH3BP2-229ENST00000515802 STARD3NLO95772 234 aa18.3■□□□□ 0.52
SH3BP2-229ENST00000515802 ANAPC15P60006 121 aa18.3■□□□□ 0.52
SH3BP2-229ENST00000515802 CWC27Q6UX04 472 aaKnown RBP18.3■□□□□ 0.52
SH3BP2-229ENST00000515802 ISCA1Q9BUE6 129 aa18.3■□□□□ 0.52
SH3BP2-229ENST00000515802 RAD50Q92878 1312 aa18.3■□□□□ 0.52
SH3BP2-229ENST00000515802 TFCP2Q12800 502 aa18.29■□□□□ 0.52
SH3BP2-229ENST00000515802 KLHL34Q8N239 644 aa18.29■□□□□ 0.52
SH3BP2-229ENST00000515802 SYTL4Q96C24 671 aaPredicted RBP18.29■□□□□ 0.52
SH3BP2-229ENST00000515802 EVI5LQ96CN4 794 aa18.29■□□□□ 0.52
SH3BP2-229ENST00000515802 LSG1Q9H089 658 aaKnown RBP18.29■□□□□ 0.52
SH3BP2-229ENST00000515802 ANKRD36CQ5JPF3 1778 aa18.28■□□□□ 0.52
SH3BP2-229ENST00000515802 HSPA4P34932 840 aa18.28■□□□□ 0.52
SH3BP2-229ENST00000515802 PIP4K2BP78356 416 aa18.28■□□□□ 0.52
SH3BP2-229ENST00000515802 TCIRG1Q13488 830 aa18.28■□□□□ 0.52
SH3BP2-229ENST00000515802 TNNI3KQ59H18 835 aa18.28■□□□□ 0.52
SH3BP2-229ENST00000515802 FPGT-TNNI3KV9GXZ4 949 aa18.28■□□□□ 0.52
SH3BP2-229ENST00000515802 NUTM2BA6NNL0 878 aaPredicted RBP18.27■□□□□ 0.52
SH3BP2-229ENST00000515802 NUTM2EB1AL46 878 aaPredicted RBP18.27■□□□□ 0.52
SH3BP2-229ENST00000515802 CYP19A1P11511 503 aaPredicted RBP18.27■□□□□ 0.52
SH3BP2-229ENST00000515802 PRIM1P49642 420 aaKnown RBP18.27■□□□□ 0.52
SH3BP2-229ENST00000515802 NUTM2AQ8IVF1 878 aaPredicted RBP18.27■□□□□ 0.52
SH3BP2-229ENST00000515802 CDCA7Q9BWT1 371 aaPredicted RBP18.27■□□□□ 0.52
SH3BP2-229ENST00000515802 DIAPH3Q9NSV4 1193 aa18.27■□□□□ 0.52
SH3BP2-229ENST00000515802 DBNLQ9UJU6 430 aaKnown RBP18.27■□□□□ 0.52
SH3BP2-229ENST00000515802 THRAP3Q9Y2W1 955 aaKnown RBP18.27■□□□□ 0.52
SH3BP2-229ENST00000515802 CHMP3Q9Y3E7 222 aa18.27■□□□□ 0.52
SH3BP2-229ENST00000515802 MCM4P33991 863 aa18.27■□□□□ 0.52
SH3BP2-229ENST00000515802 NEK4P51957 841 aa18.27■□□□□ 0.52
SH3BP2-229ENST00000515802 SLIT2O94813 1529 aa18.27■□□□□ 0.51
SH3BP2-229ENST00000515802 RAB3GAP1Q15042 981 aa18.26■□□□□ 0.51
SH3BP2-229ENST00000515802 KIF6Q6ZMV9 814 aa18.26■□□□□ 0.51
SH3BP2-229ENST00000515802 NUP98P52948 1817 aa18.26■□□□□ 0.51
SH3BP2-229ENST00000515802 SPATA31A5Q5VU36 1347 aa18.26■□□□□ 0.51
SH3BP2-229ENST00000515802 SPATA31A7Q8IWB4 1347 aa18.26■□□□□ 0.51
SH3BP2-229ENST00000515802 TRIM28Q13263 835 aaKnown RBP18.26■□□□□ 0.51
SH3BP2-229ENST00000515802 DDB1Q16531 1140 aa18.26■□□□□ 0.51
SH3BP2-229ENST00000515802 AEBP2Q6ZN18 517 aaPredicted RBP18.26■□□□□ 0.51
SH3BP2-229ENST00000515802 BOLA2Q9H3K6 86 aa18.26■□□□□ 0.51
SH3BP2-229ENST00000515802 MAP3K15Q6ZN16 1313 aa18.25■□□□□ 0.51
SH3BP2-229ENST00000515802 GSE1Q14687 1217 aa18.25■□□□□ 0.51
SH3BP2-229ENST00000515802 ATG9AQ7Z3C6 839 aa18.25■□□□□ 0.51
SH3BP2-229ENST00000515802 TNPO1Q92973 898 aaKnown RBP18.25■□□□□ 0.51
SH3BP2-229ENST00000515802 ZBTB1Q9Y2K1 713 aa18.25■□□□□ 0.51
SH3BP2-229ENST00000515802 TOM1O60784 492 aa18.24■□□□□ 0.51
SH3BP2-229ENST00000515802 HLFQ16534 295 aa18.23■□□□□ 0.51
SH3BP2-229ENST00000515802 MARCH10Q8NA82 808 aaPredicted RBP18.23■□□□□ 0.51
SH3BP2-229ENST00000515802 RUFY2Q8WXA3 655 aa18.23■□□□□ 0.51
SH3BP2-229ENST00000515802 GIGYF2Q6Y7W6 1299 aaKnown RBP18.23■□□□□ 0.51
SH3BP2-229ENST00000515802 DBNDD2Q9BQY9 259 aa18.23■□□□□ 0.51
SH3BP2-229ENST00000515802 ATP5JP18859 108 aa18.22■□□□□ 0.51
SH3BP2-229ENST00000515802 KIAA1211Q6ZU35 1233 aa18.22■□□□□ 0.51
SH3BP2-229ENST00000515802 ZNF594Q96JF6 807 aaPredicted RBP18.22■□□□□ 0.51
SH3BP2-229ENST00000515802 FAM227BQ96M60 508 aa18.22■□□□□ 0.51
SH3BP2-229ENST00000515802 UPF3BQ9BZI7 483 aaKnown RBP18.22■□□□□ 0.51
SH3BP2-229ENST00000515802 MYH3P11055 1940 aa18.22■□□□□ 0.51
SH3BP2-229ENST00000515802 PCCAP05165 728 aaPredicted RBP18.22■□□□□ 0.51
SH3BP2-229ENST00000515802 PTH1RQ03431 593 aa18.22■□□□□ 0.51
SH3BP2-229ENST00000515802 RASEFQ8IZ41 740 aa18.22■□□□□ 0.51
SH3BP2-229ENST00000515802 EDC3Q96F86 508 aaKnown RBP18.22■□□□□ 0.51
SH3BP2-229ENST00000515802 FAM89AQ96GI7 184 aa18.22■□□□□ 0.51
SH3BP2-229ENST00000515802 ARXQ96QS3 562 aa18.22■□□□□ 0.51
SH3BP2-229ENST00000515802 SNX14Q9Y5W7 946 aa18.22■□□□□ 0.51
SH3BP2-229ENST00000515802 NMIQ13287 307 aaPredicted RBP18.21■□□□□ 0.51
SH3BP2-229ENST00000515802 ZGPATQ8N5A5 531 aaKnown RBP18.21■□□□□ 0.51
SH3BP2-229ENST00000515802 LRRC24Q50LG9 513 aa18.21■□□□□ 0.5
SH3BP2-229ENST00000515802 ACSBG1Q96GR2 724 aa18.21■□□□□ 0.5
SH3BP2-229ENST00000515802 TMX3Q96JJ7 454 aa18.21■□□□□ 0.5
SH3BP2-229ENST00000515802 FSD1Q9BTV5 496 aa18.21■□□□□ 0.5
SH3BP2-229ENST00000515802 ZNF609O15014 1411 aa18.2■□□□□ 0.5
SH3BP2-229ENST00000515802 CICQ96RK0 1608 aaPredicted RBP18.2■□□□□ 0.5
SH3BP2-229ENST00000515802 A0A0D9SFI3 127 aa18.2■□□□□ 0.5
SH3BP2-229ENST00000515802 EYA2O00167 538 aa18.2■□□□□ 0.5
SH3BP2-229ENST00000515802 HIP1O00291 1037 aa18.2■□□□□ 0.5
SH3BP2-229ENST00000515802 SSFA2P28290 1259 aa18.2■□□□□ 0.5
SH3BP2-229ENST00000515802 MCM2P49736 904 aa18.2■□□□□ 0.5
SH3BP2-229ENST00000515802 BARGINQ6ZT62 677 aa18.2■□□□□ 0.5
SH3BP2-229ENST00000515802 ZBTB38Q8NAP3 1195 aaPredicted RBP18.2■□□□□ 0.5
SH3BP2-229ENST00000515802 SNRKQ9NRH2 765 aa18.2■□□□□ 0.5
SH3BP2-229ENST00000515802 RREB1Q92766 1687 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms