RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 APBA3O96018 575 aa16.8■□□□□ 0.28
COPS7B-221ENST00000488111 GCKRQ14397 625 aa16.8■□□□□ 0.28
COPS7B-221ENST00000488111 CEP85Q6P2H3 762 aa16.8■□□□□ 0.28
COPS7B-221ENST00000488111 GAS2L3Q86XJ1 694 aa16.79■□□□□ 0.28
COPS7B-221ENST00000488111 HDAC1Q13547 482 aaPredicted RBP16.79■□□□□ 0.28
COPS7B-221ENST00000488111 HSCBQ8IWL3 235 aa16.79■□□□□ 0.28
COPS7B-221ENST00000488111 MYH14Q7Z406 1995 aaKnown RBP16.78■□□□□ 0.28
COPS7B-221ENST00000488111 GRM8O00222 908 aa16.78■□□□□ 0.28
COPS7B-221ENST00000488111 GNPATO15228 680 aa16.78■□□□□ 0.28
COPS7B-221ENST00000488111 TCIRG1Q13488 830 aa16.78■□□□□ 0.28
COPS7B-221ENST00000488111 AMIGO3Q86WK7 504 aa16.78■□□□□ 0.28
COPS7B-221ENST00000488111 PROM2Q8N271 834 aa16.78■□□□□ 0.28
COPS7B-221ENST00000488111 ANKRD44Q8N8A2 993 aa16.78■□□□□ 0.28
COPS7B-221ENST00000488111 CNTNAP4Q9C0A0 1308 aa16.77■□□□□ 0.28
COPS7B-221ENST00000488111 GPTP24298 496 aa16.77■□□□□ 0.28
COPS7B-221ENST00000488111 GIGYF2Q6Y7W6 1299 aaKnown RBP16.77■□□□□ 0.28
COPS7B-221ENST00000488111 RPAP2Q8IXW5 612 aaPredicted RBP16.77■□□□□ 0.28
COPS7B-221ENST00000488111 CIZ1Q9ULV3 898 aaPredicted RBP16.77■□□□□ 0.28
COPS7B-221ENST00000488111 ARFGEF2Q9Y6D5 1785 aa16.77■□□□□ 0.27
COPS7B-221ENST00000488111 A0A087WZG4 1122 aa16.77■□□□□ 0.27
COPS7B-221ENST00000488111 MFAP1P55081 439 aaKnown RBP16.77■□□□□ 0.27
COPS7B-221ENST00000488111 TXNRD1Q16881 649 aa16.77■□□□□ 0.27
COPS7B-221ENST00000488111 COL15A1P39059 1388 aa16.76■□□□□ 0.27
COPS7B-221ENST00000488111 SKOR2Q2VWA4 1001 aaPredicted RBP16.76■□□□□ 0.27
COPS7B-221ENST00000488111 PNMA6EA0A0J9YXQ4 647 aa16.75■□□□□ 0.27
COPS7B-221ENST00000488111 PTMSP20962 102 aa16.75■□□□□ 0.27
COPS7B-221ENST00000488111 RC3H1Q5TC82 1133 aaKnown RBP16.75■□□□□ 0.27
COPS7B-221ENST00000488111 KIAA1211Q6ZU35 1233 aa16.75■□□□□ 0.27
COPS7B-221ENST00000488111 UBE3BQ7Z3V4 1068 aa16.75■□□□□ 0.27
COPS7B-221ENST00000488111 SNX21Q969T3 373 aa16.75■□□□□ 0.27
COPS7B-221ENST00000488111 SUCLG2Q96I99 432 aa16.75■□□□□ 0.27
COPS7B-221ENST00000488111 PPP1R9BQ96SB3 815 aa16.75■□□□□ 0.27
COPS7B-221ENST00000488111 CWC25Q9NXE8 425 aaPredicted RBP16.75■□□□□ 0.27
COPS7B-221ENST00000488111 LY75O60449 1722 aa16.75■□□□□ 0.27
COPS7B-221ENST00000488111 COL5A3P25940 1745 aaPredicted RBP16.75■□□□□ 0.27
COPS7B-221ENST00000488111 RPS6KA4O75676 772 aa16.75■□□□□ 0.27
COPS7B-221ENST00000488111 SMC5Q8IY18 1101 aa16.75■□□□□ 0.27
COPS7B-221ENST00000488111 TNPO1Q92973 898 aaKnown RBP16.75■□□□□ 0.27
COPS7B-221ENST00000488111 ISCA1Q9BUE6 129 aa16.75■□□□□ 0.27
COPS7B-221ENST00000488111 CICQ96RK0 1608 aaPredicted RBP16.75■□□□□ 0.27
COPS7B-221ENST00000488111 N4BP2Q86UW6 1770 aaPredicted RBP16.75■□□□□ 0.27
COPS7B-221ENST00000488111 ERVV-1B6SEH8 477 aa16.74■□□□□ 0.27
COPS7B-221ENST00000488111 PHF14O94880 888 aa16.74■□□□□ 0.27
COPS7B-221ENST00000488111 CAMTA2O94983 1202 aa16.74■□□□□ 0.27
COPS7B-221ENST00000488111 TERF1P54274 439 aa16.74■□□□□ 0.27
COPS7B-221ENST00000488111 CCDC173Q0VFZ6 552 aa16.74■□□□□ 0.27
COPS7B-221ENST00000488111 ZNF831Q5JPB2 1677 aa16.74■□□□□ 0.27
COPS7B-221ENST00000488111 ATP8B2P98198 1209 aa16.74■□□□□ 0.27
COPS7B-221ENST00000488111 SLC27A3Q5K4L6 730 aa16.74■□□□□ 0.27
COPS7B-221ENST00000488111 CCDC191Q8NCU4 936 aa16.74■□□□□ 0.27
COPS7B-221ENST00000488111 KAZALD1Q96I82 304 aa16.74■□□□□ 0.27
COPS7B-221ENST00000488111 AK7Q96M32 723 aa16.74■□□□□ 0.27
COPS7B-221ENST00000488111 RTCBQ9Y3I0 505 aaKnown RBP16.74■□□□□ 0.27
COPS7B-221ENST00000488111 NUP188Q5SRE5 1749 aa16.74■□□□□ 0.27
COPS7B-221ENST00000488111 OFD1O75665 1012 aa16.73■□□□□ 0.27
COPS7B-221ENST00000488111 GBP4Q96PP9 640 aa16.73■□□□□ 0.27
COPS7B-221ENST00000488111 UTYO14607 1347 aa16.73■□□□□ 0.27
COPS7B-221ENST00000488111 PLSCR1O15162 318 aa16.73■□□□□ 0.27
COPS7B-221ENST00000488111 RAB3GAP1Q15042 981 aa16.73■□□□□ 0.27
COPS7B-221ENST00000488111 PPP1R42Q7Z4L9 355 aa16.73■□□□□ 0.27
COPS7B-221ENST00000488111 EPHA10Q5JZY3 1008 aa16.72■□□□□ 0.27
COPS7B-221ENST00000488111 ZSCAN30Q86W11 494 aa16.72■□□□□ 0.27
COPS7B-221ENST00000488111 BICC1Q9H694 974 aaKnown RBP16.72■□□□□ 0.27
COPS7B-221ENST00000488111 SRP68Q9UHB9 627 aaKnown RBP16.72■□□□□ 0.27
COPS7B-221ENST00000488111 RREB1Q92766 1687 aa16.72■□□□□ 0.27
COPS7B-221ENST00000488111 FAM177BA6PVY3 158 aa16.72■□□□□ 0.27
COPS7B-221ENST00000488111 RBM25P49756 843 aaKnown RBP16.72■□□□□ 0.27
COPS7B-221ENST00000488111 HSP90AB3PQ58FF7 597 aa16.72■□□□□ 0.27
COPS7B-221ENST00000488111 ARHGEF1Q92888 912 aaKnown RBP16.72■□□□□ 0.27
COPS7B-221ENST00000488111 H7C1W4 665 aa16.71■□□□□ 0.27
COPS7B-221ENST00000488111 APBB1O00213 710 aa16.71■□□□□ 0.27
COPS7B-221ENST00000488111 SRGAP3O43295 1099 aa16.71■□□□□ 0.27
COPS7B-221ENST00000488111 CASP7P55210 303 aa16.71■□□□□ 0.27
COPS7B-221ENST00000488111 NLRP10Q86W26 655 aa16.71■□□□□ 0.27
COPS7B-221ENST00000488111 SYNE4Q8N205 404 aa16.71■□□□□ 0.27
COPS7B-221ENST00000488111 FAM89AQ96GI7 184 aa16.71■□□□□ 0.27
COPS7B-221ENST00000488111 HMMRO75330 724 aa16.71■□□□□ 0.26
COPS7B-221ENST00000488111 USPL1Q5W0Q7 1092 aa16.71■□□□□ 0.26
COPS7B-221ENST00000488111 TRIM28Q13263 835 aaKnown RBP16.7■□□□□ 0.26
COPS7B-221ENST00000488111 UBN2Q6ZU65 1347 aa16.7■□□□□ 0.26
COPS7B-221ENST00000488111 C4BP0C0L5 1744 aa16.7■□□□□ 0.26
COPS7B-221ENST00000488111 TRAPPC3LQ5T215 181 aa16.7■□□□□ 0.26
COPS7B-221ENST00000488111 ANKRD45Q5TZF3 282 aa16.7■□□□□ 0.26
COPS7B-221ENST00000488111 ZNF34Q8IZ26 560 aa16.7■□□□□ 0.26
COPS7B-221ENST00000488111 DCTPP1Q9H773 170 aa16.7■□□□□ 0.26
COPS7B-221ENST00000488111 AFDNP55196 1824 aaKnown RBP16.69■□□□□ 0.26
COPS7B-221ENST00000488111 IBTKQ9P2D0 1353 aaPredicted RBP16.69■□□□□ 0.26
COPS7B-221ENST00000488111 EN1Q05925 392 aaPredicted RBP16.69■□□□□ 0.26
COPS7B-221ENST00000488111 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.69■□□□□ 0.26
COPS7B-221ENST00000488111 GCC1Q96CN9 775 aa16.69■□□□□ 0.26
COPS7B-221ENST00000488111 PRDM4Q9UKN5 801 aa16.69■□□□□ 0.26
COPS7B-221ENST00000488111 NIP7Q9Y221 180 aaKnown RBP eCLIP16.69■□□□□ 0.26
COPS7B-221ENST00000488111 EXOC6BQ9Y2D4 811 aa16.69■□□□□ 0.26
COPS7B-221ENST00000488111 TAF1LQ8IZX4 1826 aa16.69■□□□□ 0.26
COPS7B-221ENST00000488111 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.69■□□□□ 0.26
COPS7B-221ENST00000488111 BICDL1Q6ZP65 573 aa16.69■□□□□ 0.26
COPS7B-221ENST00000488111 BCL2L12Q9HB09 334 aa16.69■□□□□ 0.26
COPS7B-221ENST00000488111 NARFQ9UHQ1 456 aa16.69■□□□□ 0.26
COPS7B-221ENST00000488111 HDAC5Q9UQL6 1122 aa16.69■□□□□ 0.26
COPS7B-221ENST00000488111 ZPR1O75312 459 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms