RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 COPS6Q7L5N1 327 aa13.68□□□□□ -0.22
SSBP1-210ENST00000481508 PHAXQ9H814 394 aaKnown RBP13.68□□□□□ -0.22
SSBP1-210ENST00000481508 PARP3Q9Y6F1 533 aa13.68□□□□□ -0.22
SSBP1-210ENST00000481508 PXDNLA1KZ92 1463 aa13.67□□□□□ -0.22
SSBP1-210ENST00000481508 VAMP4O75379 141 aa13.67□□□□□ -0.22
SSBP1-210ENST00000481508 GOLGA2Q08379 1002 aa13.67□□□□□ -0.22
SSBP1-210ENST00000481508 SLFN5Q08AF3 891 aa13.67□□□□□ -0.22
SSBP1-210ENST00000481508 CCDC24Q8N4L8 307 aa13.67□□□□□ -0.22
SSBP1-210ENST00000481508 CACNA1SQ13698 1873 aa13.67□□□□□ -0.22
SSBP1-210ENST00000481508 SERPINB2P05120 415 aa13.66□□□□□ -0.22
SSBP1-210ENST00000481508 KIF6Q6ZMV9 814 aa13.66□□□□□ -0.22
SSBP1-210ENST00000481508 NPM2Q86SE8 214 aaKnown RBP13.66□□□□□ -0.22
SSBP1-210ENST00000481508 RBM46Q8TBY0 533 aaKnown RBP13.66□□□□□ -0.22
SSBP1-210ENST00000481508 MYH16Q9H6N6 1097 aa13.66□□□□□ -0.22
SSBP1-210ENST00000481508 DBF4Q9UBU7 674 aaPredicted RBP13.66□□□□□ -0.22
SSBP1-210ENST00000481508 UBN2Q6ZU65 1347 aa13.65□□□□□ -0.22
SSBP1-210ENST00000481508 TIAM2Q8IVF5 1701 aa13.65□□□□□ -0.22
SSBP1-210ENST00000481508 ERVV-1B6SEH8 477 aa13.65□□□□□ -0.22
SSBP1-210ENST00000481508 HNRNPUQ00839 825 aaKnown RBP eCLIP13.65□□□□□ -0.22
SSBP1-210ENST00000481508 CLEC4GQ6UXB4 293 aa13.65□□□□□ -0.22
SSBP1-210ENST00000481508 G2E3Q7L622 706 aa13.65□□□□□ -0.22
SSBP1-210ENST00000481508 LAMB2P55268 1798 aa13.65□□□□□ -0.22
SSBP1-210ENST00000481508 E9PSI1 815 aa13.64□□□□□ -0.23
SSBP1-210ENST00000481508 GPTP24298 496 aa13.64□□□□□ -0.23
SSBP1-210ENST00000481508 CCDC30Q5VVM6 783 aa13.64□□□□□ -0.23
SSBP1-210ENST00000481508 PRR5LQ6MZQ0 368 aa13.64□□□□□ -0.23
SSBP1-210ENST00000481508 GIGYF2Q6Y7W6 1299 aaKnown RBP13.64□□□□□ -0.23
SSBP1-210ENST00000481508 TRMT2AQ8IZ69 625 aaKnown RBP13.64□□□□□ -0.23
SSBP1-210ENST00000481508 ZNF428Q96B54 188 aa13.64□□□□□ -0.23
SSBP1-210ENST00000481508 NIP7Q9Y221 180 aaKnown RBP eCLIP13.64□□□□□ -0.23
SSBP1-210ENST00000481508 ABCC12Q96J65 1359 aa13.63□□□□□ -0.23
SSBP1-210ENST00000481508 FAM177BA6PVY3 158 aa13.63□□□□□ -0.23
SSBP1-210ENST00000481508 ZNF34Q8IZ26 560 aa13.63□□□□□ -0.23
SSBP1-210ENST00000481508 SETDB2Q96T68 719 aa13.63□□□□□ -0.23
SSBP1-210ENST00000481508 HYPKQ9NX55 129 aa13.63□□□□□ -0.23
SSBP1-210ENST00000481508 ZNF652Q9Y2D9 606 aa13.63□□□□□ -0.23
SSBP1-210ENST00000481508 DDX60Q8IY21 1712 aaKnown RBP13.62□□□□□ -0.23
SSBP1-210ENST00000481508 A0A0G2JLW4 131 aa13.62□□□□□ -0.23
SSBP1-210ENST00000481508 RGL2O15211 777 aa13.62□□□□□ -0.23
SSBP1-210ENST00000481508 DPEP1P16444 411 aa13.62□□□□□ -0.23
SSBP1-210ENST00000481508 CHRNA5P30532 468 aa13.62□□□□□ -0.23
SSBP1-210ENST00000481508 SUSD4Q5VX71 490 aa13.62□□□□□ -0.23
SSBP1-210ENST00000481508 C16orf71Q8IYS4 520 aaPredicted RBP13.62□□□□□ -0.23
SSBP1-210ENST00000481508 PLBD2Q8NHP8 589 aa13.62□□□□□ -0.23
SSBP1-210ENST00000481508 PRR29P0C7W0 189 aa13.61□□□□□ -0.23
SSBP1-210ENST00000481508 KCNA3P22001 575 aa13.61□□□□□ -0.23
SSBP1-210ENST00000481508 FAM161AQ3B820 660 aa13.6□□□□□ -0.23
SSBP1-210ENST00000481508 NBPF5PQ86XG9 351 aaPredicted RBP13.6□□□□□ -0.23
SSBP1-210ENST00000481508 NUTM1Q86Y26 1132 aa13.6□□□□□ -0.23
SSBP1-210ENST00000481508 CNBD1Q8NA66 436 aa13.6□□□□□ -0.23
SSBP1-210ENST00000481508 ATP5J2-PTCD1G3V325 749 aa13.59□□□□□ -0.23
SSBP1-210ENST00000481508 NTSR2O95665 410 aa13.59□□□□□ -0.23
SSBP1-210ENST00000481508 FSTL1Q12841 308 aa13.59□□□□□ -0.23
SSBP1-210ENST00000481508 TCIRG1Q13488 830 aa13.59□□□□□ -0.23
SSBP1-210ENST00000481508 ANKRD13DQ6ZTN6 518 aa13.59□□□□□ -0.23
SSBP1-210ENST00000481508 NLRP10Q86W26 655 aa13.59□□□□□ -0.23
SSBP1-210ENST00000481508 STK31Q9BXU1 1019 aa13.59□□□□□ -0.23
SSBP1-210ENST00000481508 BCS1LQ9Y276 419 aa13.59□□□□□ -0.23
SSBP1-210ENST00000481508 SLX4Q8IY92 1834 aa13.59□□□□□ -0.23
SSBP1-210ENST00000481508 TAF1P21675 1872 aa13.59□□□□□ -0.23
SSBP1-210ENST00000481508 IBTKQ9P2D0 1353 aaPredicted RBP13.58□□□□□ -0.23
SSBP1-210ENST00000481508 TNRC18O15417 2968 aaPredicted RBP13.58□□□□□ -0.24
SSBP1-210ENST00000481508 TGFB2P61812 414 aa13.58□□□□□ -0.24
SSBP1-210ENST00000481508 FLIIQ13045 1269 aa13.58□□□□□ -0.24
SSBP1-210ENST00000481508 ERFEQ4G0M1 354 aa13.58□□□□□ -0.24
SSBP1-210ENST00000481508 SYNE4Q8N205 404 aa13.58□□□□□ -0.24
SSBP1-210ENST00000481508 ISCA1Q9BUE6 129 aa13.58□□□□□ -0.24
SSBP1-210ENST00000481508 PDE4DIPQ5VU43 2346 aa13.58□□□□□ -0.24
SSBP1-210ENST00000481508 ZBED9Q6R2W3 1325 aa13.58□□□□□ -0.24
SSBP1-210ENST00000481508 COL4A1P02462 1669 aa13.57□□□□□ -0.24
SSBP1-210ENST00000481508 EVX2Q03828 476 aa13.57□□□□□ -0.24
SSBP1-210ENST00000481508 ARHGAP27Q6ZUM4 889 aa13.57□□□□□ -0.24
SSBP1-210ENST00000481508 C3orf67Q6ZVT6 689 aa13.57□□□□□ -0.24
SSBP1-210ENST00000481508 RIC3Q7Z5B4 369 aa13.57□□□□□ -0.24
SSBP1-210ENST00000481508 C2CD5Q86YS7 1000 aa13.57□□□□□ -0.24
SSBP1-210ENST00000481508 MYD88Q99836 296 aa13.57□□□□□ -0.24
SSBP1-210ENST00000481508 BCL2L13Q9BXK5 485 aa13.57□□□□□ -0.24
SSBP1-210ENST00000481508 MAP3K2Q9Y2U5 619 aa13.57□□□□□ -0.24
SSBP1-210ENST00000481508 PI4KAP2A4QPH2 592 aa13.56□□□□□ -0.24
SSBP1-210ENST00000481508 ST5P78524 1137 aa13.56□□□□□ -0.24
SSBP1-210ENST00000481508 C9orf131Q5VYM1 1079 aa13.56□□□□□ -0.24
SSBP1-210ENST00000481508 KSR2Q6VAB6 950 aa13.56□□□□□ -0.24
SSBP1-210ENST00000481508 MRPL50Q8N5N7 158 aaKnown RBP13.56□□□□□ -0.24
SSBP1-210ENST00000481508 PI4KAP1Q8N8J0 262 aa13.56□□□□□ -0.24
SSBP1-210ENST00000481508 SSH1Q8WYL5 1049 aa13.56□□□□□ -0.24
SSBP1-210ENST00000481508 BRIP1Q9BX63 1249 aa13.56□□□□□ -0.24
SSBP1-210ENST00000481508 RRAGCQ9HB90 399 aa13.56□□□□□ -0.24
SSBP1-210ENST00000481508 C19orf67A6NJJ6 358 aa13.55□□□□□ -0.24
SSBP1-210ENST00000481508 F6X3S4 739 aa13.55□□□□□ -0.24
SSBP1-210ENST00000481508 IGKV5-2P06315 115 aa13.55□□□□□ -0.24
SSBP1-210ENST00000481508 PARP10Q53GL7 1025 aa13.55□□□□□ -0.24
SSBP1-210ENST00000481508 HSP90AB3PQ58FF7 597 aa13.55□□□□□ -0.24
SSBP1-210ENST00000481508 TPTE2Q6XPS3 522 aa13.55□□□□□ -0.24
SSBP1-210ENST00000481508 SLC51AQ86UW1 340 aa13.55□□□□□ -0.24
SSBP1-210ENST00000481508 METTL22Q9BUU2 404 aaPredicted RBP13.55□□□□□ -0.24
SSBP1-210ENST00000481508 NPHP1O15259 732 aa13.54□□□□□ -0.24
SSBP1-210ENST00000481508 FKBP5Q13451 457 aaPredicted RBP13.54□□□□□ -0.24
SSBP1-210ENST00000481508 JARID2Q92833 1246 aaPredicted RBP13.54□□□□□ -0.24
SSBP1-210ENST00000481508 UTP14AQ9BVJ6 771 aaKnown RBP13.54□□□□□ -0.24
SSBP1-210ENST00000481508 PCDH10Q9P2E7 1040 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 623.2 ms