RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 AIMP1Q12904 312 aaKnown RBP12.25□□□□□ -0.45
CD46-214ENST00000480003 KSR2Q6VAB6 950 aa12.25□□□□□ -0.45
CD46-214ENST00000480003 DZIP3Q86Y13 1208 aaKnown RBP12.25□□□□□ -0.45
CD46-214ENST00000480003 PLBD2Q8NHP8 589 aa12.25□□□□□ -0.45
CD46-214ENST00000480003 BCL2L12Q9HB09 334 aa12.25□□□□□ -0.45
CD46-214ENST00000480003 RREB1Q92766 1687 aa12.25□□□□□ -0.45
CD46-214ENST00000480003 LRP5O75197 1615 aa12.24□□□□□ -0.45
CD46-214ENST00000480003 COL15A1P39059 1388 aa12.24□□□□□ -0.45
CD46-214ENST00000480003 R3HDM1Q15032 1099 aaKnown RBP12.24□□□□□ -0.45
CD46-214ENST00000480003 HLFQ16534 295 aa12.24□□□□□ -0.45
CD46-214ENST00000480003 CLEC4GQ6UXB4 293 aa12.24□□□□□ -0.45
CD46-214ENST00000480003 MAP3K15Q6ZN16 1313 aa12.24□□□□□ -0.45
CD46-214ENST00000480003 PTPRCP08575 1304 aa12.23□□□□□ -0.45
CD46-214ENST00000480003 PI4KAP2A4QPH2 592 aa12.23□□□□□ -0.45
CD46-214ENST00000480003 PHF14O94880 888 aa12.23□□□□□ -0.45
CD46-214ENST00000480003 RFC4P35249 363 aa12.23□□□□□ -0.45
CD46-214ENST00000480003 GIGYF2Q6Y7W6 1299 aaKnown RBP12.23□□□□□ -0.45
CD46-214ENST00000480003 NPM2Q86SE8 214 aaKnown RBP12.23□□□□□ -0.45
CD46-214ENST00000480003 PI4KAP1Q8N8J0 262 aa12.23□□□□□ -0.45
CD46-214ENST00000480003 PDGFDQ9GZP0 370 aaPredicted RBP12.23□□□□□ -0.45
CD46-214ENST00000480003 SRP68Q9UHB9 627 aaKnown RBP12.23□□□□□ -0.45
CD46-214ENST00000480003 ZNF330Q9Y3S2 320 aaPredicted RBP12.23□□□□□ -0.45
CD46-214ENST00000480003 CACNA1FO60840 1977 aa12.23□□□□□ -0.45
CD46-214ENST00000480003 RNF123Q5XPI4 1314 aa12.22□□□□□ -0.45
CD46-214ENST00000480003 USP42Q9H9J4 1324 aaKnown RBP12.22□□□□□ -0.45
CD46-214ENST00000480003 IPO8O15397 1037 aaKnown RBP12.22□□□□□ -0.45
CD46-214ENST00000480003 ZPR1O75312 459 aa12.22□□□□□ -0.45
CD46-214ENST00000480003 DDX58O95786 925 aaKnown RBP12.22□□□□□ -0.45
CD46-214ENST00000480003 GYS1P13807 737 aa12.22□□□□□ -0.45
CD46-214ENST00000480003 TM4SF1P30408 202 aa12.22□□□□□ -0.45
CD46-214ENST00000480003 TRIM28Q13263 835 aaKnown RBP12.22□□□□□ -0.45
CD46-214ENST00000480003 FKBP5Q13451 457 aaPredicted RBP12.22□□□□□ -0.45
CD46-214ENST00000480003 TCIRG1Q13488 830 aa12.22□□□□□ -0.45
CD46-214ENST00000480003 USPL1Q5W0Q7 1092 aa12.22□□□□□ -0.45
CD46-214ENST00000480003 SLAIN1Q8ND83 568 aa12.22□□□□□ -0.45
CD46-214ENST00000480003 SLC16A10Q8TF71 515 aa12.22□□□□□ -0.45
CD46-214ENST00000480003 LAMB4A4D0S4 1761 aa12.22□□□□□ -0.45
CD46-214ENST00000480003 NUP188Q5SRE5 1749 aa12.22□□□□□ -0.45
CD46-214ENST00000480003 ADCY9O60503 1353 aa12.21□□□□□ -0.45
CD46-214ENST00000480003 F6X3S4 739 aa12.21□□□□□ -0.45
CD46-214ENST00000480003 ATF7IPQ6VMQ6 1270 aa12.21□□□□□ -0.45
CD46-214ENST00000480003 RIC3Q7Z5B4 369 aa12.21□□□□□ -0.45
CD46-214ENST00000480003 ZNF34Q8IZ26 560 aa12.21□□□□□ -0.45
CD46-214ENST00000480003 DNAAF4Q8WXU2 420 aa12.21□□□□□ -0.45
CD46-214ENST00000480003 ARXQ96QS3 562 aa12.21□□□□□ -0.45
CD46-214ENST00000480003 METTL22Q9BUU2 404 aaPredicted RBP12.21□□□□□ -0.45
CD46-214ENST00000480003 ZBTB3Q9H5J0 574 aa12.21□□□□□ -0.45
CD46-214ENST00000480003 MAP3K2Q9Y2U5 619 aa12.21□□□□□ -0.45
CD46-214ENST00000480003 UBR3Q6ZT12 1888 aa12.21□□□□□ -0.46
CD46-214ENST00000480003 KIF16BQ96L93 1317 aa12.2□□□□□ -0.46
CD46-214ENST00000480003 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.2□□□□□ -0.46
CD46-214ENST00000480003 TRIM27P14373 513 aa12.2□□□□□ -0.46
CD46-214ENST00000480003 BEND3Q5T5X7 828 aa12.2□□□□□ -0.46
CD46-214ENST00000480003 LCE2DQ5TA82 110 aaPredicted RBP12.2□□□□□ -0.46
CD46-214ENST00000480003 ZKSCAN2Q63HK3 967 aa12.2□□□□□ -0.46
CD46-214ENST00000480003 KIF6Q6ZMV9 814 aa12.2□□□□□ -0.46
CD46-214ENST00000480003 ZFP91Q96JP5 570 aaPredicted RBP12.2□□□□□ -0.46
CD46-214ENST00000480003 ISCA1Q9BUE6 129 aa12.2□□□□□ -0.46
CD46-214ENST00000480003 API5Q9BZZ5 524 aaKnown RBP12.2□□□□□ -0.46
CD46-214ENST00000480003 TNNQ9UQP3 1299 aa12.2□□□□□ -0.46
CD46-214ENST00000480003 PLIN1O60240 522 aa12.19□□□□□ -0.46
CD46-214ENST00000480003 IGKV5-2P06315 115 aa12.19□□□□□ -0.46
CD46-214ENST00000480003 NLGN1Q8N2Q7 840 aa12.19□□□□□ -0.46
CD46-214ENST00000480003 FRAT1Q92837 279 aaPredicted RBP12.19□□□□□ -0.46
CD46-214ENST00000480003 SUPT16HQ9Y5B9 1047 aaKnown RBP12.19□□□□□ -0.46
CD46-214ENST00000480003 CENPBP07199 599 aaPredicted RBP12.18□□□□□ -0.46
CD46-214ENST00000480003 HSP90AB3PQ58FF7 597 aa12.18□□□□□ -0.46
CD46-214ENST00000480003 TBC1D9BQ66K14 1250 aa12.18□□□□□ -0.46
CD46-214ENST00000480003 INTS3Q68E01 1043 aaKnown RBP12.18□□□□□ -0.46
CD46-214ENST00000480003 EFCAB3Q8N7B9 438 aa12.18□□□□□ -0.46
CD46-214ENST00000480003 ATP5J2-PTCD1G3V325 749 aa12.17□□□□□ -0.46
CD46-214ENST00000480003 RLBP1P12271 317 aa12.17□□□□□ -0.46
CD46-214ENST00000480003 RRP1P56182 461 aaKnown RBP12.17□□□□□ -0.46
CD46-214ENST00000480003 PDE3AQ14432 1141 aa12.17□□□□□ -0.46
CD46-214ENST00000480003 NFIXQ14938 502 aa12.17□□□□□ -0.46
CD46-214ENST00000480003 DZIP1LQ8IYY4 767 aaKnown RBP12.17□□□□□ -0.46
CD46-214ENST00000480003 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.17□□□□□ -0.46
CD46-214ENST00000480003 LINS1Q8NG48 757 aa12.17□□□□□ -0.46
CD46-214ENST00000480003 MYD88Q99836 296 aa12.17□□□□□ -0.46
CD46-214ENST00000480003 ZNF652Q9Y2D9 606 aa12.17□□□□□ -0.46
CD46-214ENST00000480003 ABCC4O15439 1325 aa12.16□□□□□ -0.46
CD46-214ENST00000480003 ALDH1L1O75891 902 aa12.16□□□□□ -0.46
CD46-214ENST00000480003 ECM2O94769 699 aaPredicted RBP12.16□□□□□ -0.46
CD46-214ENST00000480003 MS4A1P11836 297 aa12.16□□□□□ -0.46
CD46-214ENST00000480003 DPY19L2Q6NUT2 758 aa12.16□□□□□ -0.46
CD46-214ENST00000480003 NLRP10Q86W26 655 aa12.16□□□□□ -0.46
CD46-214ENST00000480003 CCDC191Q8NCU4 936 aa12.16□□□□□ -0.46
CD46-214ENST00000480003 L3MBTL3Q96JM7 780 aaPredicted RBP12.16□□□□□ -0.46
CD46-214ENST00000480003 SETDB2Q96T68 719 aa12.16□□□□□ -0.46
CD46-214ENST00000480003 NIP7Q9Y221 180 aaKnown RBP eCLIP12.16□□□□□ -0.46
CD46-214ENST00000480003 UBN2Q6ZU65 1347 aa12.15□□□□□ -0.46
CD46-214ENST00000480003 ATP10DQ9P241 1426 aa12.15□□□□□ -0.46
CD46-214ENST00000480003 POTEMA6NI47 508 aa12.15□□□□□ -0.46
CD46-214ENST00000480003 NEURL1BA8MQ27 555 aa12.15□□□□□ -0.46
CD46-214ENST00000480003 NEXNQ0ZGT2 675 aa12.15□□□□□ -0.46
CD46-214ENST00000480003 PARP10Q53GL7 1025 aa12.15□□□□□ -0.46
CD46-214ENST00000480003 C20orf194Q5TEA3 1177 aa12.15□□□□□ -0.46
CD46-214ENST00000480003 SUSD4Q5VX71 490 aa12.15□□□□□ -0.46
CD46-214ENST00000480003 SLC4A10Q6U841 1118 aa12.15□□□□□ -0.46
CD46-214ENST00000480003 CLUAP1Q96AJ1 413 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms