RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 ITM2BQ9Y287 266 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 TMEM98Q9Y2Y6 226 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 ATP6V0A2Q9Y487 856 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 PLEKHG2Q9H7P9 1386 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 NPC1L1Q9UHC9 1359 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 KIF14Q15058 1648 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 TCOF1Q13428 1488 aaKnown RBP4.49□□□□□ -1.69
LSM2-211ENST00000475835 RNF123Q5XPI4 1314 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 SETD1BQ9UPS6 1966 aaKnown RBP4.49□□□□□ -1.69
LSM2-211ENST00000475835 NAIPQ13075 1403 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 DDX11L8A8MPP1 907 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 MYO1CO00159 1063 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 SLC27A2O14975 620 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 ZSCAN9O15535 394 aaPredicted RBP4.49□□□□□ -1.69
LSM2-211ENST00000475835 PPFIA3O75145 1194 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 BBOX1O75936 387 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 COL6A1P12109 1028 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 ZNF24P17028 368 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 CD53P19397 219 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 IBSPP21815 317 aaPredicted RBP4.49□□□□□ -1.69
LSM2-211ENST00000475835 ABL2P42684 1182 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 MAGEA9P43362 315 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 SH3BGRP55822 239 aaPredicted RBP4.49□□□□□ -1.69
LSM2-211ENST00000475835 RBM6P78332 1123 aaKnown RBP4.49□□□□□ -1.69
LSM2-211ENST00000475835 WASHC5Q12768 1159 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 GRIK3Q13003 919 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 PTK7Q13308 1070 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 TRIM29Q14134 588 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 NOLC1Q14978 699 aaKnown RBP eCLIP4.49□□□□□ -1.69
LSM2-211ENST00000475835 MAPRE1Q15691 268 aaKnown RBP4.49□□□□□ -1.69
LSM2-211ENST00000475835 PKN1Q16512 942 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 PTPROQ16827 1216 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 INF2Q27J81 1249 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 TBC1D25Q3MII6 688 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 CCDC152Q4G0S7 254 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 HHATQ5VTY9 493 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 TTC30AQ86WT1 665 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 SLF2Q8IX21 1173 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 ZNF710Q8N1W2 664 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 LARGE2Q8N3Y3 721 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 ANKRD24Q8TF21 1146 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 TCP11Q8WWU5 503 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 TAF4BQ92750 862 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 NACC2Q96BF6 587 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 DHTKD1Q96HY7 919 aaPredicted RBP4.49□□□□□ -1.69
LSM2-211ENST00000475835 FAXDC2Q96IV6 333 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 RPS6KC1Q96S38 1066 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 MPHOSPH6Q99547 160 aaKnown RBP4.49□□□□□ -1.69
LSM2-211ENST00000475835 UTP14AQ9BVJ6 771 aaKnown RBP4.49□□□□□ -1.69
LSM2-211ENST00000475835 PANK2Q9BZ23 570 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 TRIM6Q9C030 488 aaPredicted RBP4.49□□□□□ -1.69
LSM2-211ENST00000475835 C6orf203Q9P0P8 240 aaPredicted RBP4.49□□□□□ -1.69
LSM2-211ENST00000475835 KIAA1522Q9P206 1035 aaPredicted RBP4.49□□□□□ -1.69
LSM2-211ENST00000475835 ZKSCAN5Q9Y2L8 839 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 CHMP3Q9Y3E7 222 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 KDM5BQ9UGL1 1544 aa4.49□□□□□ -1.69
LSM2-211ENST00000475835 DNMT1P26358 1616 aaKnown RBP4.49□□□□□ -1.69
LSM2-211ENST00000475835 EVC2Q86UK5 1308 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 CROCC2H7BZ55 1655 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 PDLIM1O00151 329 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 CHL1O00533 1208 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 HOXA2O43364 376 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 HIP1RO75146 1068 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 MMEP08473 750 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 TGFB3P10600 412 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 MNAT1P51948 309 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 ZNF131P52739 623 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 ZC3H6P61129 1189 aaKnown RBP4.48□□□□□ -1.69
LSM2-211ENST00000475835 PSME1Q06323 249 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 GOLGA2Q08379 1002 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 KCTD2Q14681 263 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 CRYMQ14894 314 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 POSTNQ15063 836 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 DBN1Q16643 649 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 CCDC144BQ3MJ40 725 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 TSGA10IPQ3SY00 556 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 KBTBD12Q3ZCT8 623 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 NUTM2GQ5VZR2 741 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 FAAH2Q6GMR7 532 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 CC2D1AQ6P1N0 951 aaPredicted RBP4.48□□□□□ -1.69
LSM2-211ENST00000475835 PPP4R3CPQ6ZMV5 832 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 RSPH3Q86UC2 560 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 CCDC144CPQ8IYA2 1237 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 CCDC146Q8IYE0 955 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 CHCHD4Q8N4Q1 142 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 IQUBQ8NA54 791 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 ZNF280CQ8ND82 737 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 SVIPQ8NHG7 77 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 ERMNQ8TAM6 284 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 NEK9Q8TD19 979 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 CENPTQ96BT3 561 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 MIEF2Q96C03 454 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 MRRFQ96E11 262 aaKnown RBP4.48□□□□□ -1.69
LSM2-211ENST00000475835 CDHR1Q96JP9 859 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 FAM81BQ96LP2 452 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 RNPC3Q96LT9 517 aaKnown RBP4.48□□□□□ -1.69
LSM2-211ENST00000475835 RPAP3Q9H6T3 665 aaPredicted RBP4.48□□□□□ -1.69
LSM2-211ENST00000475835 NRDE2Q9H7Z3 1164 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 HOMER3Q9NSC5 361 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 SPATA7Q9P0W8 599 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 329.6 ms