RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 FAM196AQ6ZSG2 479 aa5.01□□□□□ -1.61
ATP13A3-206ENST00000461660 OTUD7AQ8TE49 926 aaPredicted RBP5.01□□□□□ -1.61
ATP13A3-206ENST00000461660 UTP14AQ9BVJ6 771 aaKnown RBP5.01□□□□□ -1.61
ATP13A3-206ENST00000461660 CCDC8Q9H0W5 538 aaPredicted RBP5.01□□□□□ -1.61
ATP13A3-206ENST00000461660 SH3TC1Q8TE82 1336 aa5.01□□□□□ -1.61
ATP13A3-206ENST00000461660 BCL9O00512 1426 aa5□□□□□ -1.61
ATP13A3-206ENST00000461660 HIP1O00291 1037 aa5□□□□□ -1.61
ATP13A3-206ENST00000461660 PHF14O94880 888 aa5□□□□□ -1.61
ATP13A3-206ENST00000461660 IGHMBP2P38935 993 aaKnown RBP5□□□□□ -1.61
ATP13A3-206ENST00000461660 IL15P40933 162 aaPredicted RBP5□□□□□ -1.61
ATP13A3-206ENST00000461660 TBC1D9Q6ZT07 1266 aa5□□□□□ -1.61
ATP13A3-206ENST00000461660 KRT27Q7Z3Y8 459 aa5□□□□□ -1.61
ATP13A3-206ENST00000461660 DNAJC2Q99543 621 aaKnown RBP5□□□□□ -1.61
ATP13A3-206ENST00000461660 AKAP2Q9Y2D5 859 aa5□□□□□ -1.61
ATP13A3-206ENST00000461660 PARP4Q9UKK3 1724 aaKnown RBP5□□□□□ -1.61
ATP13A3-206ENST00000461660 RGPD2P0DJD1 1756 aa5□□□□□ -1.61
ATP13A3-206ENST00000461660 ERVV-1B6SEH8 477 aa5□□□□□ -1.61
ATP13A3-206ENST00000461660 MAP4K4O95819 1239 aaPredicted RBP5□□□□□ -1.61
ATP13A3-206ENST00000461660 PCCAP05165 728 aaPredicted RBP5□□□□□ -1.61
ATP13A3-206ENST00000461660 SDSP20132 328 aa5□□□□□ -1.61
ATP13A3-206ENST00000461660 SF3B2Q13435 895 aaKnown RBP5□□□□□ -1.61
ATP13A3-206ENST00000461660 MTX1Q13505 466 aa5□□□□□ -1.61
ATP13A3-206ENST00000461660 POLA2Q14181 598 aa5□□□□□ -1.61
ATP13A3-206ENST00000461660 CCDC158Q5M9N0 1113 aa5□□□□□ -1.61
ATP13A3-206ENST00000461660 LDHAL6AQ6ZMR3 332 aa5□□□□□ -1.61
ATP13A3-206ENST00000461660 DISP2A7MBM2 1401 aa5□□□□□ -1.61
ATP13A3-206ENST00000461660 CCDC152Q4G0S7 254 aa5□□□□□ -1.61
ATP13A3-206ENST00000461660 NBPF5PQ86XG9 351 aaPredicted RBP5□□□□□ -1.61
ATP13A3-206ENST00000461660 ZBTB38Q8NAP3 1195 aaPredicted RBP5□□□□□ -1.61
ATP13A3-206ENST00000461660 SETDB2Q96T68 719 aa5□□□□□ -1.61
ATP13A3-206ENST00000461660 TMX4Q9H1E5 349 aaPredicted RBP5□□□□□ -1.61
ATP13A3-206ENST00000461660 LRRC37A3O60309 1634 aa4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 RGPD5Q99666 1765 aa4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 SLIT2O94813 1529 aa4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 ST18O60284 1047 aa4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 FRAT2O75474 233 aaPredicted RBP4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 RBM6P78332 1123 aaKnown RBP4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 TTC39AQ5SRH9 613 aa4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 KLHDC4Q8TBB5 520 aa4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 CDC5LQ99459 802 aaKnown RBP4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 BOLA2Q9H3K6 86 aa4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 AOX1Q06278 1338 aa4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 TTC41PQ6P2S7 1318 aa4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 MRC1P22897 1456 aa4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 COL18A1P39060 1754 aa4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 H7C1W4 665 aa4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 EYA2O00167 538 aa4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 FGD1P98174 961 aa4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 TRIM28Q13263 835 aaKnown RBP4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 NLRP10Q86W26 655 aa4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 VPS37DQ86XT2 251 aa4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 ISCA1Q9BUE6 129 aa4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 NYXQ9GZU5 481 aa4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 COPRSQ9NQ92 184 aa4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 COL16A1Q07092 1604 aaPredicted RBP4.99□□□□□ -1.61
ATP13A3-206ENST00000461660 PDE8AO60658 829 aa4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 RXRBP28702 533 aa4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 KCNQ4P56696 695 aa4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 TRAPPC3LQ5T215 181 aa4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 TRIM37O94972 964 aa4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 HCLS1P14317 486 aaPredicted RBP4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 ZKSCAN1P17029 563 aaPredicted RBP4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 SLC4A3P48751 1232 aa4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 EIF5P55010 431 aaKnown RBP4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 TFCP2Q12800 502 aa4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 HLFQ16534 295 aa4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 EVI5LQ96CN4 794 aa4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 TBC1D32Q96NH3 1257 aa4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 BCL11BQ9C0K0 894 aaPredicted RBP4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 UTYO14607 1347 aa4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 IFIT1P09914 478 aaKnown RBP4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 CTSWP56202 376 aa4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 ITPK1Q13572 414 aa4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 RABEP1Q15276 862 aa4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 ATP2B3Q16720 1220 aa4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 EPHA10Q5JZY3 1008 aa4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 RNF20Q5VTR2 975 aa4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 TPTE2Q6XPS3 522 aa4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 SPRYD3Q8NCJ5 442 aa4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 SLKQ9H2G2 1235 aaPredicted RBP4.98□□□□□ -1.61
ATP13A3-206ENST00000461660 COL15A1P39059 1388 aa4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 SLC5A1P13866 664 aa4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 GSPT1P15170 499 aaKnown RBP4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 ITGA6P23229 1130 aa4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 FKBP4Q02790 459 aaKnown RBP eCLIP4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 TNNI3KQ59H18 835 aa4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 CWC27Q6UX04 472 aaKnown RBP4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 ZNF594Q96JF6 807 aaPredicted RBP4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 NLRP3Q96P20 1036 aa4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 STAP2Q9UGK3 403 aa4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 FPGT-TNNI3KV9GXZ4 949 aa4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 RPS6KA4O75676 772 aa4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 SEC24BO95487 1268 aa4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 APBA3O96018 575 aa4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 NBR1Q14596 966 aa4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 WASHC4Q2M389 1173 aa4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 OSBPL3Q9H4L5 887 aa4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 GNL3LQ9NVN8 582 aaKnown RBP4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 TFCP2L1Q9NZI6 479 aa4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 FBXO3Q9UK99 471 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms