RNA–Protein interactions for RNA: ENST00000461636.1

THUMPD3-207, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-207ENST00000461636 ELOA3BQ3SY89 546 aa9.22□□□□□ -0.93
THUMPD3-207ENST00000461636 SYT9Q86SS6 491 aa9.22□□□□□ -0.93
THUMPD3-207ENST00000461636 OGFOD1Q8N543 542 aa9.22□□□□□ -0.93
THUMPD3-207ENST00000461636 ELOA3Q8NG57 546 aa9.22□□□□□ -0.93
THUMPD3-207ENST00000461636 PODXL2Q9NZ53 605 aa9.22□□□□□ -0.93
THUMPD3-207ENST00000461636 ADAMTS12P58397 1594 aa9.21□□□□□ -0.93
THUMPD3-207ENST00000461636 SIN3BO75182 1162 aa9.21□□□□□ -0.94
THUMPD3-207ENST00000461636 HIRAP54198 1017 aaPredicted RBP9.21□□□□□ -0.94
THUMPD3-207ENST00000461636 C1orf53Q5VUE5 145 aa9.21□□□□□ -0.94
THUMPD3-207ENST00000461636 TSPAN10Q9H1Z9 355 aaPredicted RBP9.21□□□□□ -0.94
THUMPD3-207ENST00000461636 ANKIB1Q9P2G1 1089 aa9.21□□□□□ -0.94
THUMPD3-207ENST00000461636 MKRN1Q9UHC7 482 aaKnown RBP9.21□□□□□ -0.94
THUMPD3-207ENST00000461636 SPDYE3A6NKU9 549 aa9.2□□□□□ -0.94
THUMPD3-207ENST00000461636 C1QTNF9BB2RNN3 333 aa9.2□□□□□ -0.94
THUMPD3-207ENST00000461636 ZBTB7BO15156 539 aaPredicted RBP9.2□□□□□ -0.94
THUMPD3-207ENST00000461636 SH3PXD2AQ5TCZ1 1133 aa9.2□□□□□ -0.94
THUMPD3-207ENST00000461636 SIX5Q8N196 739 aa9.2□□□□□ -0.94
THUMPD3-207ENST00000461636 SYNJ2O15056 1496 aa9.2□□□□□ -0.94
THUMPD3-207ENST00000461636 SPATA31C1P0DKV0 1188 aa9.18□□□□□ -0.94
THUMPD3-207ENST00000461636 CD163Q86VB7 1156 aa9.18□□□□□ -0.94
THUMPD3-207ENST00000461636 ZNF594Q96JF6 807 aaPredicted RBP9.18□□□□□ -0.94
THUMPD3-207ENST00000461636 CEP63Q96MT8 703 aa9.18□□□□□ -0.94
THUMPD3-207ENST00000461636 PHACTR1Q9C0D0 580 aa9.18□□□□□ -0.94
THUMPD3-207ENST00000461636 KIF27Q86VH2 1401 aa9.17□□□□□ -0.94
THUMPD3-207ENST00000461636 ADARB2-AS1A8MUL3 147 aa9.17□□□□□ -0.94
THUMPD3-207ENST00000461636 PPP1R12BO60237 982 aaPredicted RBP9.17□□□□□ -0.94
THUMPD3-207ENST00000461636 SPEM2Q0P670 501 aa9.17□□□□□ -0.94
THUMPD3-207ENST00000461636 SFSWAPQ12872 951 aaKnown RBP9.17□□□□□ -0.94
THUMPD3-207ENST00000461636 HIF1AQ16665 826 aa9.17□□□□□ -0.94
THUMPD3-207ENST00000461636 POTEAQ6S8J7 498 aa9.17□□□□□ -0.94
THUMPD3-207ENST00000461636 C7orf43Q8WVR3 580 aa9.17□□□□□ -0.94
THUMPD3-207ENST00000461636 TRIM11Q96F44 468 aa9.17□□□□□ -0.94
THUMPD3-207ENST00000461636 PLVAPQ9BX97 442 aa9.17□□□□□ -0.94
THUMPD3-207ENST00000461636 BRD7Q9NPI1 651 aa9.17□□□□□ -0.94
THUMPD3-207ENST00000461636 CLASP1Q7Z460 1538 aa9.16□□□□□ -0.94
THUMPD3-207ENST00000461636 FURINP09958 794 aa9.16□□□□□ -0.94
THUMPD3-207ENST00000461636 CHRNA4P43681 627 aa9.16□□□□□ -0.94
THUMPD3-207ENST00000461636 TSEN2Q8NCE0 465 aaKnown RBP9.16□□□□□ -0.94
THUMPD3-207ENST00000461636 TNFRSF25Q93038 417 aa9.16□□□□□ -0.94
THUMPD3-207ENST00000461636 HCN4Q9Y3Q4 1203 aa9.16□□□□□ -0.94
THUMPD3-207ENST00000461636 CUL7Q14999 1698 aa9.16□□□□□ -0.94
THUMPD3-207ENST00000461636 FHAD1B1AJZ9 1412 aa9.15□□□□□ -0.94
THUMPD3-207ENST00000461636 PRRT3Q5FWE3 981 aa9.15□□□□□ -0.94
THUMPD3-207ENST00000461636 PROSER2Q86WR7 435 aaPredicted RBP9.15□□□□□ -0.94
THUMPD3-207ENST00000461636 GLMNQ92990 594 aa9.15□□□□□ -0.94
THUMPD3-207ENST00000461636 HSH2DQ96JZ2 352 aa9.15□□□□□ -0.94
THUMPD3-207ENST00000461636 SLC30A3Q99726 388 aa9.15□□□□□ -0.94
THUMPD3-207ENST00000461636 MDFIQ99750 246 aa9.15□□□□□ -0.94
THUMPD3-207ENST00000461636 RUSC2Q8N2Y8 1516 aa9.15□□□□□ -0.95
THUMPD3-207ENST00000461636 GRIN2AQ12879 1464 aa9.15□□□□□ -0.95
THUMPD3-207ENST00000461636 SFI1A8K8P3 1242 aa9.14□□□□□ -0.95
THUMPD3-207ENST00000461636 RASA1P20936 1047 aa9.14□□□□□ -0.95
THUMPD3-207ENST00000461636 TYRO3Q06418 890 aa9.14□□□□□ -0.95
THUMPD3-207ENST00000461636 KCNH4Q9UQ05 1017 aa9.14□□□□□ -0.95
THUMPD3-207ENST00000461636 NUP160Q12769 1436 aa9.14□□□□□ -0.95
THUMPD3-207ENST00000461636 M0R082 166 aa9.13□□□□□ -0.95
THUMPD3-207ENST00000461636 ADH7P40394 386 aa9.13□□□□□ -0.95
THUMPD3-207ENST00000461636 SEC13P55735 322 aa9.13□□□□□ -0.95
THUMPD3-207ENST00000461636 KCNQ4P56696 695 aa9.13□□□□□ -0.95
THUMPD3-207ENST00000461636 STAG2Q8N3U4 1231 aa9.13□□□□□ -0.95
THUMPD3-207ENST00000461636 GAS2L2Q8NHY3 880 aa9.13□□□□□ -0.95
THUMPD3-207ENST00000461636 ZNF417Q8TAU3 575 aa9.13□□□□□ -0.95
THUMPD3-207ENST00000461636 SUSD3Q96L08 255 aa9.13□□□□□ -0.95
THUMPD3-207ENST00000461636 ZNF587Q96SQ5 575 aaPredicted RBP9.13□□□□□ -0.95
THUMPD3-207ENST00000461636 CEP170Q5SW79 1584 aa9.12□□□□□ -0.95
THUMPD3-207ENST00000461636 LARP1Q6PKG0 1096 aaKnown RBP9.12□□□□□ -0.95
THUMPD3-207ENST00000461636 ALDH16A1Q8IZ83 802 aa9.12□□□□□ -0.95
THUMPD3-207ENST00000461636 PRDM6Q9NQX0 595 aa9.12□□□□□ -0.95
THUMPD3-207ENST00000461636 MAFBQ9Y5Q3 323 aaPredicted RBP9.12□□□□□ -0.95
THUMPD3-207ENST00000461636 RAB44Q7Z6P3 723 aaPredicted RBP9.11□□□□□ -0.95
THUMPD3-207ENST00000461636 CLUAP1Q96AJ1 413 aa9.11□□□□□ -0.95
THUMPD3-207ENST00000461636 TFIP11Q9UBB9 837 aaKnown RBP9.11□□□□□ -0.95
THUMPD3-207ENST00000461636 ATAD2Q6PL18 1390 aa9.11□□□□□ -0.95
THUMPD3-207ENST00000461636 C21orf2O43822 256 aa9.1□□□□□ -0.95
THUMPD3-207ENST00000461636 DKK1O94907 266 aa9.1□□□□□ -0.95
THUMPD3-207ENST00000461636 APBA3O96018 575 aa9.1□□□□□ -0.95
THUMPD3-207ENST00000461636 GATA4P43694 442 aa9.1□□□□□ -0.95
THUMPD3-207ENST00000461636 FNBP4Q8N3X1 1017 aaPredicted RBP9.1□□□□□ -0.95
THUMPD3-207ENST00000461636 ZNF280CQ8ND82 737 aa9.1□□□□□ -0.95
THUMPD3-207ENST00000461636 CHMP7Q8WUX9 453 aaPredicted RBP9.1□□□□□ -0.95
THUMPD3-207ENST00000461636 SCG3Q8WXD2 468 aaKnown RBP9.1□□□□□ -0.95
THUMPD3-207ENST00000461636 C2orf49Q9BVC5 232 aaPredicted RBP9.1□□□□□ -0.95
THUMPD3-207ENST00000461636 SHROOM2Q13796 1616 aa9.09□□□□□ -0.95
THUMPD3-207ENST00000461636 PRXQ9BXM0 1461 aa9.09□□□□□ -0.95
THUMPD3-207ENST00000461636 BTLAQ7Z6A9 289 aa9.09□□□□□ -0.95
THUMPD3-207ENST00000461636 NGLY1Q96IV0 654 aa9.09□□□□□ -0.95
THUMPD3-207ENST00000461636 EFCC1Q9HA90 598 aa9.09□□□□□ -0.95
THUMPD3-207ENST00000461636 ALBP02768 609 aa9.08□□□□□ -0.96
THUMPD3-207ENST00000461636 MICALL1Q8N3F8 863 aa9.08□□□□□ -0.96
THUMPD3-207ENST00000461636 BHMTQ93088 406 aa9.08□□□□□ -0.96
THUMPD3-207ENST00000461636 CALR3Q96L12 384 aaKnown RBP9.08□□□□□ -0.96
THUMPD3-207ENST00000461636 NACC1Q96RE7 527 aa9.08□□□□□ -0.96
THUMPD3-207ENST00000461636 IER5Q5VY09 327 aa9.07□□□□□ -0.96
THUMPD3-207ENST00000461636 HINFPQ9BQA5 517 aa9.07□□□□□ -0.96
THUMPD3-207ENST00000461636 UBE2OQ9C0C9 1292 aaKnown RBP9.07□□□□□ -0.96
THUMPD3-207ENST00000461636 STARD13Q9Y3M8 1113 aa9.07□□□□□ -0.96
THUMPD3-207ENST00000461636 CARMIL1Q5VZK9 1371 aa9.07□□□□□ -0.96
THUMPD3-207ENST00000461636 EEA1Q15075 1411 aa9.06□□□□□ -0.96
THUMPD3-207ENST00000461636 TBC1D8BQ0IIM8 1120 aa9.06□□□□□ -0.96
THUMPD3-207ENST00000461636 TRIM28Q13263 835 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms