RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 OVOS2Q6IE36 1432 aa9.64□□□□□ -0.87
HMGN1-205ENST00000419378 ANKRD36BQ8N2N9 1353 aa9.63□□□□□ -0.87
HMGN1-205ENST00000419378 SPATA31A1Q5TZJ5 1347 aa9.63□□□□□ -0.87
HMGN1-205ENST00000419378 ZBTB7CA1YPR0 619 aa9.63□□□□□ -0.87
HMGN1-205ENST00000419378 CCNYL3P0C7X3 344 aa9.63□□□□□ -0.87
HMGN1-205ENST00000419378 VAC14Q08AM6 782 aa9.63□□□□□ -0.87
HMGN1-205ENST00000419378 WASHC4Q2M389 1173 aa9.63□□□□□ -0.87
HMGN1-205ENST00000419378 CDCA8Q53HL2 280 aa9.63□□□□□ -0.87
HMGN1-205ENST00000419378 KCNH5Q8NCM2 988 aa9.63□□□□□ -0.87
HMGN1-205ENST00000419378 NKX2-3Q8TAU0 364 aa9.63□□□□□ -0.87
HMGN1-205ENST00000419378 NUDT12Q9BQG2 462 aa9.63□□□□□ -0.87
HMGN1-205ENST00000419378 ABCC6O95255 1503 aa9.62□□□□□ -0.87
HMGN1-205ENST00000419378 A0A0G2JS52 829 aa9.62□□□□□ -0.87
HMGN1-205ENST00000419378 EVA1CP58658 441 aa9.62□□□□□ -0.87
HMGN1-205ENST00000419378 MYT1Q01538 1121 aa9.62□□□□□ -0.87
HMGN1-205ENST00000419378 PNMA1Q8ND90 353 aa9.62□□□□□ -0.87
HMGN1-205ENST00000419378 SLC6A16Q9GZN6 736 aa9.62□□□□□ -0.87
HMGN1-205ENST00000419378 EVA1BQ9NVM1 165 aa9.62□□□□□ -0.87
HMGN1-205ENST00000419378 LTN1O94822 1766 aa9.61□□□□□ -0.87
HMGN1-205ENST00000419378 EIF4G2P78344 907 aaKnown RBP eCLIP9.61□□□□□ -0.871e-6■□□□□ 9.4
HMGN1-205ENST00000419378 LARP1Q6PKG0 1096 aaKnown RBP9.61□□□□□ -0.87
HMGN1-205ENST00000419378 ARHGEF25Q86VW2 580 aa9.61□□□□□ -0.87
HMGN1-205ENST00000419378 RNF166Q96A37 237 aaPredicted RBP9.61□□□□□ -0.87
HMGN1-205ENST00000419378 CCDC97Q96F63 343 aaPredicted RBP9.61□□□□□ -0.87
HMGN1-205ENST00000419378 FKBPLQ9UIM3 349 aa9.61□□□□□ -0.87
HMGN1-205ENST00000419378 CRB1P82279 1406 aa9.6□□□□□ -0.87
HMGN1-205ENST00000419378 HSPA5P11021 654 aaKnown RBP9.6□□□□□ -0.87
HMGN1-205ENST00000419378 KCNH2Q12809 1159 aa9.6□□□□□ -0.87
HMGN1-205ENST00000419378 KRT27Q7Z3Y8 459 aa9.6□□□□□ -0.87
HMGN1-205ENST00000419378 HOMEZQ8IX15 550 aa9.6□□□□□ -0.87
HMGN1-205ENST00000419378 GLMNQ92990 594 aa9.6□□□□□ -0.87
HMGN1-205ENST00000419378 CALR3Q96L12 384 aaKnown RBP9.6□□□□□ -0.87
HMGN1-205ENST00000419378 USP35Q9P2H5 1018 aa9.6□□□□□ -0.87
HMGN1-205ENST00000419378 HCSTQ9UBK5 93 aa9.6□□□□□ -0.87
HMGN1-205ENST00000419378 RGPD5Q99666 1765 aa9.6□□□□□ -0.87
HMGN1-205ENST00000419378 KIF20BQ96Q89 1820 aa9.59□□□□□ -0.87
HMGN1-205ENST00000419378 CCDC24Q8N4L8 307 aa9.59□□□□□ -0.87
HMGN1-205ENST00000419378 SERPINA10Q9UK55 444 aa9.59□□□□□ -0.87
HMGN1-205ENST00000419378 WNK3Q9BYP7 1800 aa9.59□□□□□ -0.88
HMGN1-205ENST00000419378 WDR17Q8IZU2 1322 aa9.58□□□□□ -0.88
HMGN1-205ENST00000419378 HDGFL1Q5TGJ6 251 aa9.58□□□□□ -0.88
HMGN1-205ENST00000419378 TCP11L2Q8N4U5 519 aa9.58□□□□□ -0.88
HMGN1-205ENST00000419378 ADAMTS19Q8TE59 1207 aa9.58□□□□□ -0.88
HMGN1-205ENST00000419378 PARP4Q9UKK3 1724 aaKnown RBP9.58□□□□□ -0.88
HMGN1-205ENST00000419378 BLMP54132 1417 aaPredicted RBP9.57□□□□□ -0.88
HMGN1-205ENST00000419378 NSD3Q9BZ95 1437 aa9.57□□□□□ -0.88
HMGN1-205ENST00000419378 LRRC37A3O60309 1634 aa9.57□□□□□ -0.88
HMGN1-205ENST00000419378 S1PR4O95977 384 aa9.57□□□□□ -0.88
HMGN1-205ENST00000419378 TOM1L2Q6ZVM7 507 aa9.57□□□□□ -0.88
HMGN1-205ENST00000419378 COG3Q96JB2 828 aa9.57□□□□□ -0.88
HMGN1-205ENST00000419378 THRAP3Q9Y2W1 955 aaKnown RBP9.57□□□□□ -0.88
HMGN1-205ENST00000419378 FYB1O15117 783 aa9.56□□□□□ -0.88
HMGN1-205ENST00000419378 CSB-PGBD3P0DP91 1061 aa9.56□□□□□ -0.88
HMGN1-205ENST00000419378 PTCRAQ6ISU1 281 aaPredicted RBP9.56□□□□□ -0.88
HMGN1-205ENST00000419378 CCDC125Q86Z20 511 aa9.56□□□□□ -0.88
HMGN1-205ENST00000419378 POLR3GLQ9BT43 218 aa9.56□□□□□ -0.88
HMGN1-205ENST00000419378 CARD14Q9BXL6 1004 aa9.56□□□□□ -0.88
HMGN1-205ENST00000419378 GGNBP2Q9H3C7 697 aa9.56□□□□□ -0.88
HMGN1-205ENST00000419378 SRCAPQ6ZRS2 3230 aa9.55□□□□□ -0.88
HMGN1-205ENST00000419378 FBXO45P0C2W1 286 aa9.55□□□□□ -0.88
HMGN1-205ENST00000419378 NR1H3Q13133 447 aa9.55□□□□□ -0.88
HMGN1-205ENST00000419378 FAM182BQ5T319 152 aa9.55□□□□□ -0.88
HMGN1-205ENST00000419378 DISP2A7MBM2 1401 aa9.55□□□□□ -0.88
HMGN1-205ENST00000419378 MAP3K19Q56UN5 1328 aa9.55□□□□□ -0.88
HMGN1-205ENST00000419378 ZC3H4Q9UPT8 1303 aaKnown RBP9.55□□□□□ -0.88
HMGN1-205ENST00000419378 RGPD1P0DJD0 1748 aa9.54□□□□□ -0.88
HMGN1-205ENST00000419378 TNS1Q9HBL0 1735 aaKnown RBP9.54□□□□□ -0.88
HMGN1-205ENST00000419378 KCNC4Q03721 635 aa9.54□□□□□ -0.88
HMGN1-205ENST00000419378 ARMC2Q8NEN0 867 aa9.54□□□□□ -0.88
HMGN1-205ENST00000419378 CARD10Q9BWT7 1032 aa9.54□□□□□ -0.88
HMGN1-205ENST00000419378 UNC93B1Q9H1C4 597 aa9.54□□□□□ -0.88
HMGN1-205ENST00000419378 ALG2Q9H553 416 aa9.54□□□□□ -0.88
HMGN1-205ENST00000419378 FAM208AQ9UK61 1670 aaKnown RBP9.54□□□□□ -0.88
HMGN1-205ENST00000419378 RTL1A6NKG5 1358 aa9.53□□□□□ -0.88
HMGN1-205ENST00000419378 CCDC7Q96M83 1385 aa9.53□□□□□ -0.88
HMGN1-205ENST00000419378 ZBBXA8MT70 800 aa9.53□□□□□ -0.88
HMGN1-205ENST00000419378 PDE3BQ13370 1112 aa9.53□□□□□ -0.88
HMGN1-205ENST00000419378 ANKRD24Q8TF21 1146 aa9.53□□□□□ -0.88
HMGN1-205ENST00000419378 IP6K1Q92551 441 aa9.53□□□□□ -0.88
HMGN1-205ENST00000419378 FCF1Q9Y324 198 aaKnown RBP9.53□□□□□ -0.88
HMGN1-205ENST00000419378 C11orf95C9JLR9 678 aaPredicted RBP9.52□□□□□ -0.89
HMGN1-205ENST00000419378 ITGBL1O95965 494 aaPredicted RBP9.52□□□□□ -0.89
HMGN1-205ENST00000419378 FBLN1P23142 703 aa9.52□□□□□ -0.89
HMGN1-205ENST00000419378 HOXC9P31274 260 aa9.52□□□□□ -0.89
HMGN1-205ENST00000419378 SF3B2Q13435 895 aaKnown RBP9.52□□□□□ -0.89
HMGN1-205ENST00000419378 DEFB132Q7Z7B7 95 aa9.52□□□□□ -0.89
HMGN1-205ENST00000419378 CDCA7Q9BWT1 371 aaPredicted RBP9.52□□□□□ -0.89
HMGN1-205ENST00000419378 PEAK1Q9H792 1746 aa9.52□□□□□ -0.89
HMGN1-205ENST00000419378 ANKRD26Q9UPS8 1709 aa9.52□□□□□ -0.89
HMGN1-205ENST00000419378 CGNL1Q0VF96 1302 aa9.52□□□□□ -0.89
HMGN1-205ENST00000419378 OVOS2A0A0G2JMS6 1433 aa9.51□□□□□ -0.89
HMGN1-205ENST00000419378 TNS2Q63HR2 1409 aa9.51□□□□□ -0.89
HMGN1-205ENST00000419378 PPEF1O14829 653 aaPredicted RBP9.51□□□□□ -0.89
HMGN1-205ENST00000419378 SOX11P35716 441 aa9.51□□□□□ -0.89
HMGN1-205ENST00000419378 AMPHP49418 695 aa9.51□□□□□ -0.89
HMGN1-205ENST00000419378 SEMA3FQ13275 785 aa9.51□□□□□ -0.89
HMGN1-205ENST00000419378 RRS1Q15050 365 aaKnown RBP9.51□□□□□ -0.89
HMGN1-205ENST00000419378 DDB1Q16531 1140 aa9.51□□□□□ -0.89
HMGN1-205ENST00000419378 NBPF14Q5TI25 921 aa9.51□□□□□ -0.89
HMGN1-205ENST00000419378 PDXDC2PQ6P474 469 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 1619 ms