RNA–Protein interactions for RNA: ENST00000410092.7

SPIRE1-203, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-203ENST00000410092 METAP2P50579 478 aaKnown RBP eCLIP28.3■■■□□ 2.12
SPIRE1-203ENST00000410092 KLHL10Q6JEL2 608 aa28.3■■■□□ 2.12
SPIRE1-203ENST00000410092 MTHFSDQ2M296 383 aaKnown RBP28.3■■■□□ 2.12
SPIRE1-203ENST00000410092 IL15P40933 162 aaPredicted RBP28.3■■■□□ 2.12
SPIRE1-203ENST00000410092 CNNM3Q8NE01 707 aa28.3■■■□□ 2.12
SPIRE1-203ENST00000410092 WDR78Q5VTH9 848 aa28.29■■■□□ 2.12
SPIRE1-203ENST00000410092 JAKMIP3Q5VZ66 844 aa28.29■■■□□ 2.12
SPIRE1-203ENST00000410092 SHANK2Q9UPX8 1470 aa28.29■■■□□ 2.12
SPIRE1-203ENST00000410092 MYO1BO43795 1136 aa28.29■■■□□ 2.12
SPIRE1-203ENST00000410092 TBC1D2Q9BYX2 928 aa28.29■■■□□ 2.12
SPIRE1-203ENST00000410092 ZFYVE9O95405 1425 aa28.29■■■□□ 2.12
SPIRE1-203ENST00000410092 IGHDP01880 384 aa28.29■■■□□ 2.12
SPIRE1-203ENST00000410092 TSHZ3Q63HK5 1081 aa28.29■■■□□ 2.12
SPIRE1-203ENST00000410092 C8orf58Q8NAV2 365 aa28.29■■■□□ 2.12
SPIRE1-203ENST00000410092 UBA5Q9GZZ9 404 aa28.29■■■□□ 2.12
SPIRE1-203ENST00000410092 ANKRD44Q8N8A2 993 aa28.28■■■□□ 2.12
SPIRE1-203ENST00000410092 ORC3Q9UBD5 711 aaPredicted RBP28.28■■■□□ 2.12
SPIRE1-203ENST00000410092 WDR62O43379 1518 aa28.28■■■□□ 2.12
SPIRE1-203ENST00000410092 ATP8B2P98198 1209 aa28.28■■■□□ 2.12
SPIRE1-203ENST00000410092 MCM5P33992 734 aa28.28■■■□□ 2.12
SPIRE1-203ENST00000410092 DDX19AQ9NUU7 478 aaKnown RBP28.28■■■□□ 2.12
SPIRE1-203ENST00000410092 SFPQP23246 707 aaKnown RBP eCLIP28.28■■■□□ 2.12
SPIRE1-203ENST00000410092 C8orf37Q96NL8 207 aa28.28■■■□□ 2.12
SPIRE1-203ENST00000410092 ZRANB1Q9UGI0 708 aa28.28■■■□□ 2.12
SPIRE1-203ENST00000410092 CCDC178Q5BJE1 867 aa28.27■■■□□ 2.12
SPIRE1-203ENST00000410092 LMBR1LQ6UX01 489 aa28.27■■■□□ 2.12
SPIRE1-203ENST00000410092 MICU3Q86XE3 530 aa28.27■■■□□ 2.12
SPIRE1-203ENST00000410092 LRRC59Q96AG4 307 aaKnown RBP28.27■■■□□ 2.12
SPIRE1-203ENST00000410092 SPA17Q15506 151 aa28.27■■■□□ 2.12
SPIRE1-203ENST00000410092 UTP14AQ9BVJ6 771 aaKnown RBP28.27■■■□□ 2.12
SPIRE1-203ENST00000410092 SSFA2P28290 1259 aa28.27■■■□□ 2.12
SPIRE1-203ENST00000410092 TCP11L1Q9NUJ3 509 aa28.27■■■□□ 2.12
SPIRE1-203ENST00000410092 ZMYM3Q14202 1370 aa28.27■■■□□ 2.12
SPIRE1-203ENST00000410092 FSIP1Q8NA03 581 aa28.27■■■□□ 2.12
SPIRE1-203ENST00000410092 KRT23Q9C075 422 aa28.27■■■□□ 2.12
SPIRE1-203ENST00000410092 STX6O43752 255 aa28.26■■■□□ 2.12
SPIRE1-203ENST00000410092 PYM1Q9BRP8 204 aaKnown RBP28.26■■■□□ 2.12
SPIRE1-203ENST00000410092 SEPT7Q16181 437 aaKnown RBP28.26■■■□□ 2.11
SPIRE1-203ENST00000410092 CALML4Q96GE6 196 aa28.26■■■□□ 2.11
SPIRE1-203ENST00000410092 NIP7Q9Y221 180 aaKnown RBP eCLIP28.26■■■□□ 2.11
SPIRE1-203ENST00000410092 NYXQ9GZU5 481 aa28.26■■■□□ 2.11
SPIRE1-203ENST00000410092 PARD3Q8TEW0 1356 aa28.26■■■□□ 2.11
SPIRE1-203ENST00000410092 MAP3K5Q99683 1374 aa28.25■■■□□ 2.11
SPIRE1-203ENST00000410092 CETN2P41208 172 aa28.25■■■□□ 2.11
SPIRE1-203ENST00000410092 AMPD3Q01432 767 aa28.25■■■□□ 2.11
SPIRE1-203ENST00000410092 CCDC144CPQ8IYA2 1237 aa28.25■■■□□ 2.11
SPIRE1-203ENST00000410092 CABLES1Q8TDN4 633 aa28.25■■■□□ 2.11
SPIRE1-203ENST00000410092 LARP6Q9BRS8 491 aaKnown RBP28.25■■■□□ 2.11
SPIRE1-203ENST00000410092 CACNA2D4Q7Z3S7 1137 aa28.25■■■□□ 2.11
SPIRE1-203ENST00000410092 CYP7A1P22680 504 aa28.25■■■□□ 2.11
SPIRE1-203ENST00000410092 VPS36Q86VN1 386 aa28.24■■■□□ 2.11
SPIRE1-203ENST00000410092 CCDC148Q8NFR7 591 aa28.24■■■□□ 2.11
SPIRE1-203ENST00000410092 LINS1Q8NG48 757 aa28.24■■■□□ 2.11
SPIRE1-203ENST00000410092 VAT1LQ9HCJ6 419 aa28.24■■■□□ 2.11
SPIRE1-203ENST00000410092 DCAF5Q96JK2 942 aa28.24■■■□□ 2.11
SPIRE1-203ENST00000410092 H0YHG0 523 aa28.23■■■□□ 2.11
SPIRE1-203ENST00000410092 EIF3JO75822 258 aaKnown RBP28.23■■■□□ 2.11
SPIRE1-203ENST00000410092 GCP02774 474 aa28.23■■■□□ 2.11
SPIRE1-203ENST00000410092 PPP4R3BQ5MIZ7 849 aa28.23■■■□□ 2.11
SPIRE1-203ENST00000410092 SSR1P43307 286 aaKnown RBP28.23■■■□□ 2.11
SPIRE1-203ENST00000410092 SLC26A6Q9BXS9 759 aa28.23■■■□□ 2.11
SPIRE1-203ENST00000410092 ZSCAN12O43309 604 aa28.23■■■□□ 2.11
SPIRE1-203ENST00000410092 DZIP3Q86Y13 1208 aaKnown RBP28.23■■■□□ 2.11
SPIRE1-203ENST00000410092 CNNM2Q9H8M5 875 aa28.23■■■□□ 2.11
SPIRE1-203ENST00000410092 TBX22Q9Y458 520 aa28.23■■■□□ 2.11
SPIRE1-203ENST00000410092 MAPKBP1O60336 1514 aa28.23■■■□□ 2.11
SPIRE1-203ENST00000410092 KIF2AO00139 706 aaPredicted RBP28.23■■■□□ 2.11
SPIRE1-203ENST00000410092 WTAPQ15007 396 aa28.23■■■□□ 2.11
SPIRE1-203ENST00000410092 SIRT1Q96EB6 747 aa28.23■■■□□ 2.11
SPIRE1-203ENST00000410092 PDE1AP54750 535 aa28.22■■■□□ 2.11
SPIRE1-203ENST00000410092 NEBLO76041 1014 aa28.22■■■□□ 2.11
SPIRE1-203ENST00000410092 SDSP20132 328 aa28.22■■■□□ 2.11
SPIRE1-203ENST00000410092 TMTC2Q8N394 836 aa28.22■■■□□ 2.11
SPIRE1-203ENST00000410092 NFATC2IPQ8NCF5 419 aa28.22■■■□□ 2.11
SPIRE1-203ENST00000410092 TNPO1Q92973 898 aaKnown RBP28.22■■■□□ 2.11
SPIRE1-203ENST00000410092 TOP1P11387 765 aaKnown RBP28.22■■■□□ 2.11
SPIRE1-203ENST00000410092 NCKAP5LQ9HCH0 1330 aa28.22■■■□□ 2.11
SPIRE1-203ENST00000410092 IBSPP21815 317 aaPredicted RBP28.21■■■□□ 2.11
SPIRE1-203ENST00000410092 CHMP4BP1P59074 171 aa28.21■■■□□ 2.11
SPIRE1-203ENST00000410092 ABCC2Q92887 1545 aa28.21■■■□□ 2.11
SPIRE1-203ENST00000410092 LEKR1Q6ZMV7 388 aa28.21■■■□□ 2.11
SPIRE1-203ENST00000410092 HDAC9Q9UKV0 1011 aa28.21■■■□□ 2.11
SPIRE1-203ENST00000410092 ZRSR2Q15696 482 aaKnown RBP28.21■■■□□ 2.11
SPIRE1-203ENST00000410092 SLC4A4Q9Y6R1 1079 aa28.21■■■□□ 2.11
SPIRE1-203ENST00000410092 ESR2Q92731 530 aa28.2■■■□□ 2.11
SPIRE1-203ENST00000410092 MCMDC2Q4G0Z9 681 aa28.2■■■□□ 2.1
SPIRE1-203ENST00000410092 YTHDC2Q9H6S0 1430 aaKnown RBP28.2■■■□□ 2.1
SPIRE1-203ENST00000410092 KCNA6P17658 529 aa28.19■■■□□ 2.1
SPIRE1-203ENST00000410092 ZNF804AQ7Z570 1209 aa28.19■■■□□ 2.1
SPIRE1-203ENST00000410092 PCDH11XQ9BZA7 1347 aa28.19■■■□□ 2.1
SPIRE1-203ENST00000410092 PCDH11YQ9BZA8 1340 aa28.19■■■□□ 2.1
SPIRE1-203ENST00000410092 TSPY3P0CV98 308 aa28.19■■■□□ 2.1
SPIRE1-203ENST00000410092 TSPY8P0CW00 308 aa28.19■■■□□ 2.1
SPIRE1-203ENST00000410092 CCDC191Q8NCU4 936 aa28.19■■■□□ 2.1
SPIRE1-203ENST00000410092 KANK3Q6NY19 840 aa28.19■■■□□ 2.1
SPIRE1-203ENST00000410092 IP6K1Q92551 441 aa28.19■■■□□ 2.1
SPIRE1-203ENST00000410092 EYA1Q99502 592 aa28.19■■■□□ 2.1
SPIRE1-203ENST00000410092 NAA16Q6N069 864 aaPredicted RBP28.18■■■□□ 2.1
SPIRE1-203ENST00000410092 CCDC150Q8NCX0 1101 aa28.18■■■□□ 2.1
SPIRE1-203ENST00000410092 KLF18A0A0U1RQI7 1052 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms