RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 DDNO94850 711 aaPredicted RBP16.92■□□□□ 0.3
SEC13-209ENST00000397117 KRT24Q2M2I5 525 aa16.92■□□□□ 0.3
SEC13-209ENST00000397117 ALDH1L2Q3SY69 923 aa16.92■□□□□ 0.3
SEC13-209ENST00000397117 BCL2L13Q9BXK5 485 aa16.92■□□□□ 0.3
SEC13-209ENST00000397117 POTEIP0CG38 1075 aa16.91■□□□□ 0.3
SEC13-209ENST00000397117 POTEJP0CG39 1038 aa16.91■□□□□ 0.3
SEC13-209ENST00000397117 PRPF40BQ6NWY9 871 aaKnown RBP16.91■□□□□ 0.3
SEC13-209ENST00000397117 C7orf43Q8WVR3 580 aa16.91■□□□□ 0.3
SEC13-209ENST00000397117 SSH1Q8WYL5 1049 aa16.91■□□□□ 0.3
SEC13-209ENST00000397117 MASTLQ96GX5 879 aa16.91■□□□□ 0.3
SEC13-209ENST00000397117 CREBZFQ9NS37 354 aa16.91■□□□□ 0.3
SEC13-209ENST00000397117 EIF4A1P60842 406 aaKnown RBP16.9■□□□□ 0.3
SEC13-209ENST00000397117 IRX6P78412 446 aaPredicted RBP16.9■□□□□ 0.3
SEC13-209ENST00000397117 DZIP3Q86Y13 1208 aaKnown RBP16.9■□□□□ 0.3
SEC13-209ENST00000397117 USP16Q9Y5T5 823 aa16.9■□□□□ 0.3
SEC13-209ENST00000397117 SCN4AP35499 1836 aa16.89■□□□□ 0.3
SEC13-209ENST00000397117 PLIN1O60240 522 aa16.89■□□□□ 0.29
SEC13-209ENST00000397117 ST5P78524 1137 aa16.89■□□□□ 0.29
SEC13-209ENST00000397117 SOGA3Q5TF21 947 aa16.89■□□□□ 0.29
SEC13-209ENST00000397117 KDM3BQ7LBC6 1761 aa16.89■□□□□ 0.29
SEC13-209ENST00000397117 CLEC4GQ6UXB4 293 aa16.88■□□□□ 0.29
SEC13-209ENST00000397117 NPM2Q86SE8 214 aaKnown RBP16.88■□□□□ 0.29
SEC13-209ENST00000397117 FRAT1Q92837 279 aaPredicted RBP16.88■□□□□ 0.29
SEC13-209ENST00000397117 CHMP4AQ9BY43 222 aa16.88■□□□□ 0.29
SEC13-209ENST00000397117 KLRG2A4D1S0 409 aaPredicted RBP16.87■□□□□ 0.29
SEC13-209ENST00000397117 NPHP1O15259 732 aa16.87■□□□□ 0.29
SEC13-209ENST00000397117 HOXB7P09629 217 aa16.87■□□□□ 0.29
SEC13-209ENST00000397117 L3MBTL3Q96JM7 780 aaPredicted RBP16.87■□□□□ 0.29
SEC13-209ENST00000397117 MKRN1Q9UHC7 482 aaKnown RBP16.87■□□□□ 0.29
SEC13-209ENST00000397117 KIF16BQ96L93 1317 aa16.87■□□□□ 0.29
SEC13-209ENST00000397117 PRAMEF22A3QJZ6 481 aa16.86■□□□□ 0.29
SEC13-209ENST00000397117 PIP4K2AP48426 406 aaPredicted RBP16.86■□□□□ 0.29
SEC13-209ENST00000397117 PASKQ96RG2 1323 aa16.86■□□□□ 0.29
SEC13-209ENST00000397117 TCERG1O14776 1098 aaKnown RBP16.85■□□□□ 0.29
SEC13-209ENST00000397117 IPO8O15397 1037 aaKnown RBP16.85■□□□□ 0.29
SEC13-209ENST00000397117 NPR1P16066 1061 aa16.85■□□□□ 0.29
SEC13-209ENST00000397117 CCDC30Q5VVM6 783 aa16.85■□□□□ 0.29
SEC13-209ENST00000397117 NBPF5PQ86XG9 351 aaPredicted RBP16.85■□□□□ 0.29
SEC13-209ENST00000397117 TAF1DQ9H5J8 278 aaPredicted RBP16.85■□□□□ 0.29
SEC13-209ENST00000397117 IQCA1LA6NCM1 817 aa16.85■□□□□ 0.29
SEC13-209ENST00000397117 BRPF1P55201 1214 aaPredicted RBP16.85■□□□□ 0.29
SEC13-209ENST00000397117 CCDC93Q567U6 631 aa16.85■□□□□ 0.29
SEC13-209ENST00000397117 LDHDQ86WU2 507 aa16.85■□□□□ 0.29
SEC13-209ENST00000397117 MRPL50Q8N5N7 158 aaKnown RBP16.85■□□□□ 0.29
SEC13-209ENST00000397117 STK31Q9BXU1 1019 aa16.85■□□□□ 0.29
SEC13-209ENST00000397117 RGL2O15211 777 aa16.84■□□□□ 0.29
SEC13-209ENST00000397117 SNRPA1P09661 255 aaKnown RBP16.84■□□□□ 0.29
SEC13-209ENST00000397117 HDGFL1Q5TGJ6 251 aa16.84■□□□□ 0.29
SEC13-209ENST00000397117 ZKSCAN2Q63HK3 967 aa16.84■□□□□ 0.29
SEC13-209ENST00000397117 NOB1Q9ULX3 412 aaKnown RBP16.84■□□□□ 0.29
SEC13-209ENST00000397117 CNTNAP1P78357 1384 aa16.84■□□□□ 0.29
SEC13-209ENST00000397117 NBPF26B4DH59 902 aa16.83■□□□□ 0.28
SEC13-209ENST00000397117 ITGBL1O95965 494 aaPredicted RBP16.83■□□□□ 0.28
SEC13-209ENST00000397117 EIF2S2P20042 333 aaKnown RBP16.83■□□□□ 0.28
SEC13-209ENST00000397117 FKBP4Q02790 459 aaKnown RBP eCLIP16.83■□□□□ 0.28
SEC13-209ENST00000397117 NBPF10Q6P3W6 841 aaKnown RBP16.83■□□□□ 0.28
SEC13-209ENST00000397117 NBPF15Q8N660 670 aa16.83■□□□□ 0.28
SEC13-209ENST00000397117 ZNF652Q9Y2D9 606 aa16.83■□□□□ 0.28
SEC13-209ENST00000397117 MS4A1P11836 297 aa16.82■□□□□ 0.28
SEC13-209ENST00000397117 ERICH6BQ5W0A0 696 aa16.82■□□□□ 0.28
SEC13-209ENST00000397117 TPTE2Q6XPS3 522 aa16.82■□□□□ 0.28
SEC13-209ENST00000397117 NECTIN2Q92692 538 aa16.82■□□□□ 0.28
SEC13-209ENST00000397117 FOXN1O15353 648 aa16.81■□□□□ 0.28
SEC13-209ENST00000397117 SLC4A2P04920 1241 aa16.81■□□□□ 0.28
SEC13-209ENST00000397117 PDE3AQ14432 1141 aa16.81■□□□□ 0.28
SEC13-209ENST00000397117 OLFM4Q6UX06 510 aa16.81■□□□□ 0.28
SEC13-209ENST00000397117 FTSJ3Q8IY81 847 aaKnown RBP16.81■□□□□ 0.28
SEC13-209ENST00000397117 ZNF277Q9NRM2 450 aaPredicted RBP16.81■□□□□ 0.28
SEC13-209ENST00000397117 NIP7Q9Y221 180 aaKnown RBP eCLIP16.81■□□□□ 0.28
SEC13-209ENST00000397117 ZNF541Q9H0D2 1346 aa16.81■□□□□ 0.28
SEC13-209ENST00000397117 ADAMTSL1Q8N6G6 1762 aa16.81■□□□□ 0.28
SEC13-209ENST00000397117 C20orf194Q5TEA3 1177 aa16.81■□□□□ 0.28
SEC13-209ENST00000397117 RTKN2Q8IZC4 609 aa16.81■□□□□ 0.28
SEC13-209ENST00000397117 ATF7IPQ6VMQ6 1270 aa16.8■□□□□ 0.28
SEC13-209ENST00000397117 ARHGAP45Q92619 1136 aa16.8■□□□□ 0.28
SEC13-209ENST00000397117 HACL1Q9UJ83 578 aa16.8■□□□□ 0.28
SEC13-209ENST00000397117 TMEM88BA6NKF7 163 aa16.79■□□□□ 0.28
SEC13-209ENST00000397117 FZD9O00144 591 aa16.79■□□□□ 0.28
SEC13-209ENST00000397117 VEGFBP49765 207 aa16.79■□□□□ 0.28
SEC13-209ENST00000397117 HLFQ16534 295 aa16.79■□□□□ 0.28
SEC13-209ENST00000397117 PRDM10Q9NQV6 1147 aa16.79■□□□□ 0.28
SEC13-209ENST00000397117 ALDH1B1P30837 517 aa16.78■□□□□ 0.28
SEC13-209ENST00000397117 DZIP1LQ8IYY4 767 aaKnown RBP16.78■□□□□ 0.28
SEC13-209ENST00000397117 SYNE4Q8N205 404 aa16.78■□□□□ 0.28
SEC13-209ENST00000397117 TRIM27P14373 513 aa16.78■□□□□ 0.28
SEC13-209ENST00000397117 EPHX2P34913 555 aa16.78■□□□□ 0.28
SEC13-209ENST00000397117 IARSP41252 1262 aaKnown RBP16.78■□□□□ 0.28
SEC13-209ENST00000397117 EAPPQ56P03 285 aaPredicted RBP16.78■□□□□ 0.28
SEC13-209ENST00000397117 PANK1Q8TE04 598 aa16.78■□□□□ 0.28
SEC13-209ENST00000397117 CLUAP1Q96AJ1 413 aa16.78■□□□□ 0.28
SEC13-209ENST00000397117 CRBNQ96SW2 442 aa16.78■□□□□ 0.28
SEC13-209ENST00000397117 API5Q9BZZ5 524 aaKnown RBP16.78■□□□□ 0.28
SEC13-209ENST00000397117 NUP98P52948 1817 aa16.77■□□□□ 0.28
SEC13-209ENST00000397117 SNED1Q8TER0 1413 aa16.77■□□□□ 0.28
SEC13-209ENST00000397117 PTPRCP08575 1304 aa16.77■□□□□ 0.27
SEC13-209ENST00000397117 FAM177BA6PVY3 158 aa16.77■□□□□ 0.27
SEC13-209ENST00000397117 CHPF2Q9P2E5 772 aa16.77■□□□□ 0.27
SEC13-209ENST00000397117 DBF4Q9UBU7 674 aaPredicted RBP16.77■□□□□ 0.27
SEC13-209ENST00000397117 CTCFP49711 727 aaPredicted RBP16.76■□□□□ 0.27
SEC13-209ENST00000397117 PNMA8AQ86V59 439 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms