RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 HYPKQ9NX55 129 aa12.12□□□□□ -0.47
USP11-203ENST00000377080 PALD1Q9ULE6 856 aa12.12□□□□□ -0.47
USP11-203ENST00000377080 LIMCH1Q9UPQ0 1083 aa12.12□□□□□ -0.47
USP11-203ENST00000377080 RGPD3A6NKT7 1758 aaPredicted RBP12.12□□□□□ -0.47
USP11-203ENST00000377080 RGPD4Q7Z3J3 1758 aa12.12□□□□□ -0.47
USP11-203ENST00000377080 SOX12O15370 315 aa12.11□□□□□ -0.47
USP11-203ENST00000377080 SRGAP3O43295 1099 aa12.11□□□□□ -0.47
USP11-203ENST00000377080 PRIM1P49642 420 aaKnown RBP12.11□□□□□ -0.47
USP11-203ENST00000377080 CHRNA2Q15822 529 aa12.11□□□□□ -0.47
USP11-203ENST00000377080 NBPF6Q5VWK0 638 aa12.11□□□□□ -0.47
USP11-203ENST00000377080 CLASRPQ8N2M8 674 aaKnown RBP12.11□□□□□ -0.47
USP11-203ENST00000377080 NBPF4Q96M43 638 aa12.11□□□□□ -0.47
USP11-203ENST00000377080 ECHDC1Q9NTX5 307 aa12.11□□□□□ -0.47
USP11-203ENST00000377080 CEP350Q5VT06 3117 aa12.11□□□□□ -0.47
USP11-203ENST00000377080 ERBB4Q15303 1308 aa12.11□□□□□ -0.47
USP11-203ENST00000377080 ADCY9O60503 1353 aa12.1□□□□□ -0.47
USP11-203ENST00000377080 ZBTB7AO95365 584 aa12.1□□□□□ -0.47
USP11-203ENST00000377080 MSNP26038 577 aaKnown RBP12.1□□□□□ -0.47
USP11-203ENST00000377080 ZC3H6P61129 1189 aaKnown RBP12.1□□□□□ -0.47
USP11-203ENST00000377080 TEFQ10587 303 aa12.1□□□□□ -0.47
USP11-203ENST00000377080 VPS53Q5VIR6 699 aa12.1□□□□□ -0.47
USP11-203ENST00000377080 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.1□□□□□ -0.47
USP11-203ENST00000377080 EVI5LQ96CN4 794 aa12.1□□□□□ -0.47
USP11-203ENST00000377080 PHAXQ9H814 394 aaKnown RBP12.1□□□□□ -0.47
USP11-203ENST00000377080 SH2B1Q9NRF2 756 aaPredicted RBP12.1□□□□□ -0.47
USP11-203ENST00000377080 STRN4Q9NRL3 753 aa12.1□□□□□ -0.47
USP11-203ENST00000377080 TMEM63CQ9P1W3 806 aa12.1□□□□□ -0.47
USP11-203ENST00000377080 CCDC39Q9UFE4 941 aa12.1□□□□□ -0.47
USP11-203ENST00000377080 PI4KAP2A4QPH2 592 aa12.09□□□□□ -0.47
USP11-203ENST00000377080 BTBD11A6QL63 1104 aa12.09□□□□□ -0.47
USP11-203ENST00000377080 RNMTO43148 476 aaKnown RBP12.09□□□□□ -0.47
USP11-203ENST00000377080 RRP9O43818 475 aaKnown RBP12.09□□□□□ -0.47
USP11-203ENST00000377080 NBPF7P0C2Y1 421 aaPredicted RBP12.09□□□□□ -0.47
USP11-203ENST00000377080 ARHGEF25Q86VW2 580 aa12.09□□□□□ -0.47
USP11-203ENST00000377080 PI4KAP1Q8N8J0 262 aa12.09□□□□□ -0.47
USP11-203ENST00000377080 LINS1Q8NG48 757 aa12.09□□□□□ -0.47
USP11-203ENST00000377080 SYT17Q9BSW7 474 aa12.09□□□□□ -0.47
USP11-203ENST00000377080 SNX14Q9Y5W7 946 aa12.09□□□□□ -0.47
USP11-203ENST00000377080 COL15A1P39059 1388 aa12.08□□□□□ -0.48
USP11-203ENST00000377080 RPAP1Q9BWH6 1393 aaPredicted RBP12.08□□□□□ -0.48
USP11-203ENST00000377080 DDX58O95786 925 aaKnown RBP12.08□□□□□ -0.48
USP11-203ENST00000377080 NAP1L5Q96NT1 182 aaPredicted RBP12.08□□□□□ -0.48
USP11-203ENST00000377080 ARXQ96QS3 562 aa12.08□□□□□ -0.48
USP11-203ENST00000377080 FHDC1Q9C0D6 1143 aaPredicted RBP12.08□□□□□ -0.48
USP11-203ENST00000377080 PDGFDQ9GZP0 370 aaPredicted RBP12.08□□□□□ -0.48
USP11-203ENST00000377080 TSPY26PQ9H489 355 aa12.08□□□□□ -0.48
USP11-203ENST00000377080 ZSWIM6Q9HCJ5 1215 aa12.08□□□□□ -0.48
USP11-203ENST00000377080 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.08□□□□□ -0.48
USP11-203ENST00000377080 CHPF2Q9P2E5 772 aa12.08□□□□□ -0.48
USP11-203ENST00000377080 ZSCAN22P10073 491 aaPredicted RBP12.07□□□□□ -0.48
USP11-203ENST00000377080 PTGER2P43116 358 aa12.07□□□□□ -0.48
USP11-203ENST00000377080 TSGA10IPQ3SY00 556 aa12.07□□□□□ -0.48
USP11-203ENST00000377080 C1orf141Q5JVX7 400 aa12.07□□□□□ -0.48
USP11-203ENST00000377080 NUTM1Q86Y26 1132 aa12.07□□□□□ -0.48
USP11-203ENST00000377080 LGR6Q9HBX8 967 aa12.07□□□□□ -0.48
USP11-203ENST00000377080 IL1RAPL2Q9NP60 686 aa12.07□□□□□ -0.48
USP11-203ENST00000377080 DDX21Q9NR30 783 aaKnown RBP eCLIP12.07□□□□□ -0.48
USP11-203ENST00000377080 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.07□□□□□ -0.48
USP11-203ENST00000377080 ATF5Q9Y2D1 282 aaPredicted RBP12.07□□□□□ -0.48
USP11-203ENST00000377080 ZKSCAN5Q9Y2L8 839 aa12.07□□□□□ -0.48
USP11-203ENST00000377080 RGPD2P0DJD1 1756 aa12.07□□□□□ -0.48
USP11-203ENST00000377080 SBF2Q86WG5 1849 aa12.07□□□□□ -0.48
USP11-203ENST00000377080 UBE2HP62256 183 aa12.06□□□□□ -0.48
USP11-203ENST00000377080 NECTIN1Q15223 517 aa12.06□□□□□ -0.48
USP11-203ENST00000377080 ZNF530Q6P9A1 599 aaPredicted RBP12.06□□□□□ -0.48
USP11-203ENST00000377080 BARGINQ6ZT62 677 aa12.06□□□□□ -0.48
USP11-203ENST00000377080 DIAPH3Q9NSV4 1193 aa12.06□□□□□ -0.48
USP11-203ENST00000377080 PARP4Q9UKK3 1724 aaKnown RBP12.06□□□□□ -0.48
USP11-203ENST00000377080 RFX7Q2KHR2 1363 aa12.05□□□□□ -0.48
USP11-203ENST00000377080 SYCE3A1L190 88 aa12.05□□□□□ -0.48
USP11-203ENST00000377080 STX6O43752 255 aa12.05□□□□□ -0.48
USP11-203ENST00000377080 EIF2S2P20042 333 aaKnown RBP12.05□□□□□ -0.48
USP11-203ENST00000377080 PSMA5P28066 241 aa12.05□□□□□ -0.48
USP11-203ENST00000377080 AK2P54819 239 aa12.05□□□□□ -0.48
USP11-203ENST00000377080 ANKRD1Q15327 319 aa12.05□□□□□ -0.48
USP11-203ENST00000377080 CCDC183Q5T5S1 534 aa12.05□□□□□ -0.48
USP11-203ENST00000377080 TSHZ3Q63HK5 1081 aa12.05□□□□□ -0.48
USP11-203ENST00000377080 MAP4K1Q92918 833 aa12.05□□□□□ -0.48
USP11-203ENST00000377080 LTV1Q96GA3 475 aaPredicted RBP12.05□□□□□ -0.48
USP11-203ENST00000377080 C9orf78Q9NZ63 289 aaPredicted RBP12.05□□□□□ -0.48
USP11-203ENST00000377080 MRC1P22897 1456 aa12.05□□□□□ -0.48
USP11-203ENST00000377080 TCHHQ07283 1943 aa12.04□□□□□ -0.48
USP11-203ENST00000377080 GRM8O00222 908 aa12.04□□□□□ -0.48
USP11-203ENST00000377080 GCP02774 474 aa12.04□□□□□ -0.48
USP11-203ENST00000377080 IFIT2P09913 472 aaKnown RBP12.04□□□□□ -0.48
USP11-203ENST00000377080 ZKSCAN1P17029 563 aaPredicted RBP12.04□□□□□ -0.48
USP11-203ENST00000377080 PDCP20941 246 aa12.04□□□□□ -0.48
USP11-203ENST00000377080 EVA1CP58658 441 aa12.04□□□□□ -0.48
USP11-203ENST00000377080 LARP1Q6PKG0 1096 aaKnown RBP12.04□□□□□ -0.48
USP11-203ENST00000377080 USP48Q86UV5 1035 aa12.04□□□□□ -0.48
USP11-203ENST00000377080 NECTIN2Q92692 538 aa12.04□□□□□ -0.48
USP11-203ENST00000377080 BCL11BQ9C0K0 894 aaPredicted RBP12.04□□□□□ -0.48
USP11-203ENST00000377080 HMG20BQ9P0W2 317 aa12.04□□□□□ -0.48
USP11-203ENST00000377080 SMC3Q9UQE7 1217 aa12.04□□□□□ -0.48
USP11-203ENST00000377080 MAP3K2Q9Y2U5 619 aa12.04□□□□□ -0.48
USP11-203ENST00000377080 CYP46A1Q9Y6A2 500 aa12.04□□□□□ -0.48
USP11-203ENST00000377080 SCN11AQ9UI33 1791 aa12.04□□□□□ -0.48
USP11-203ENST00000377080 CCDC171Q6TFL3 1326 aa12.04□□□□□ -0.48
USP11-203ENST00000377080 PLSCR1O15162 318 aa12.03□□□□□ -0.48
USP11-203ENST00000377080 F13A1P00488 732 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms