RNA–Protein interactions for RNA: ENST00000366999.8

NEK2-202, Transcript of NIMA related kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK2, Length 2,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-202ENST00000366999 ITPK1Q13572 414 aa20.42■□□□□ 0.86
NEK2-202ENST00000366999 COPRSQ9NQ92 184 aa20.42■□□□□ 0.86
NEK2-202ENST00000366999 SPATA31A6Q5VVP1 1343 aa20.42■□□□□ 0.86
NEK2-202ENST00000366999 RILPL2Q969X0 211 aa20.41■□□□□ 0.86
NEK2-202ENST00000366999 USP26Q9BXU7 913 aa20.41■□□□□ 0.86
NEK2-202ENST00000366999 IL25Q9H293 177 aa20.41■□□□□ 0.86
NEK2-202ENST00000366999 TRIM6-TRIM34B2RNG4 842 aa20.41■□□□□ 0.86
NEK2-202ENST00000366999 G3BP1Q13283 466 aaKnown RBP eCLIP20.4■□□□□ 0.86
NEK2-202ENST00000366999 INTS5Q6P9B9 1019 aaKnown RBP20.4■□□□□ 0.86
NEK2-202ENST00000366999 ERC1Q8IUD2 1116 aa20.4■□□□□ 0.86
NEK2-202ENST00000366999 CLASRPQ8N2M8 674 aaKnown RBP20.4■□□□□ 0.86
NEK2-202ENST00000366999 USP21Q9UK80 565 aa20.4■□□□□ 0.86
NEK2-202ENST00000366999 CHMLP26374 656 aa20.39■□□□□ 0.86
NEK2-202ENST00000366999 KIF6Q6ZMV9 814 aa20.39■□□□□ 0.86
NEK2-202ENST00000366999 AACSQ86V21 672 aa20.39■□□□□ 0.86
NEK2-202ENST00000366999 SYNE4Q8N205 404 aa20.39■□□□□ 0.86
NEK2-202ENST00000366999 PALLDQ8WX93 1383 aa20.39■□□□□ 0.85
NEK2-202ENST00000366999 GIGYF2Q6Y7W6 1299 aaKnown RBP20.39■□□□□ 0.85
NEK2-202ENST00000366999 ARXQ96QS3 562 aa20.39■□□□□ 0.85
NEK2-202ENST00000366999 CCDC8Q9H0W5 538 aaPredicted RBP20.39■□□□□ 0.85
NEK2-202ENST00000366999 LOC102724428A0A0B4J2F2 783 aa20.38■□□□□ 0.85
NEK2-202ENST00000366999 SIK1P57059 783 aa20.38■□□□□ 0.85
NEK2-202ENST00000366999 CD2BP2O95400 341 aaKnown RBP20.38■□□□□ 0.85
NEK2-202ENST00000366999 GPTP24298 496 aa20.38■□□□□ 0.85
NEK2-202ENST00000366999 TRIM28Q13263 835 aaKnown RBP20.38■□□□□ 0.85
NEK2-202ENST00000366999 ESYT1Q9BSJ8 1104 aa20.38■□□□□ 0.85
NEK2-202ENST00000366999 TBC1D2BQ9UPU7 963 aa20.38■□□□□ 0.85
NEK2-202ENST00000366999 BTAF1O14981 1849 aa20.37■□□□□ 0.85
NEK2-202ENST00000366999 ATP6V1AP38606 617 aa20.37■□□□□ 0.85
NEK2-202ENST00000366999 DAXXQ9UER7 740 aaPredicted RBP20.37■□□□□ 0.85
NEK2-202ENST00000366999 TTC41PQ6P2S7 1318 aa20.37■□□□□ 0.85
NEK2-202ENST00000366999 CRKLP46109 303 aaKnown RBP20.36■□□□□ 0.85
NEK2-202ENST00000366999 FAM182BQ5T319 152 aa20.36■□□□□ 0.85
NEK2-202ENST00000366999 MYH3P11055 1940 aa20.36■□□□□ 0.85
NEK2-202ENST00000366999 ERC2O15083 957 aa20.36■□□□□ 0.85
NEK2-202ENST00000366999 IL6STP40189 918 aaPredicted RBP20.36■□□□□ 0.85
NEK2-202ENST00000366999 TFCP2Q12800 502 aa20.36■□□□□ 0.85
NEK2-202ENST00000366999 BECN1Q14457 450 aa20.36■□□□□ 0.85
NEK2-202ENST00000366999 AEBP2Q6ZN18 517 aaPredicted RBP20.36■□□□□ 0.85
NEK2-202ENST00000366999 FAM89AQ96GI7 184 aa20.36■□□□□ 0.85
NEK2-202ENST00000366999 IFIT2P09913 472 aaKnown RBP20.35■□□□□ 0.85
NEK2-202ENST00000366999 EIF5P55010 431 aaKnown RBP20.35■□□□□ 0.85
NEK2-202ENST00000366999 NLRP10Q86W26 655 aa20.35■□□□□ 0.85
NEK2-202ENST00000366999 ZNF594Q96JF6 807 aaPredicted RBP20.35■□□□□ 0.85
NEK2-202ENST00000366999 ECHDC1Q9NTX5 307 aa20.35■□□□□ 0.85
NEK2-202ENST00000366999 CHMP3Q9Y3E7 222 aa20.35■□□□□ 0.85
NEK2-202ENST00000366999 ZNF831Q5JPB2 1677 aa20.35■□□□□ 0.85
NEK2-202ENST00000366999 ATG9AQ7Z3C6 839 aa20.35■□□□□ 0.85
NEK2-202ENST00000366999 DZIP3Q86Y13 1208 aaKnown RBP20.35■□□□□ 0.85
NEK2-202ENST00000366999 CCDC87Q9NVE4 849 aa20.35■□□□□ 0.85
NEK2-202ENST00000366999 NHSQ6T4R5 1651 aa20.34■□□□□ 0.85
NEK2-202ENST00000366999 UBN2Q6ZU65 1347 aa20.34■□□□□ 0.85
NEK2-202ENST00000366999 PCCAP05165 728 aaPredicted RBP20.34■□□□□ 0.85
NEK2-202ENST00000366999 KCNQ4P56696 695 aa20.34■□□□□ 0.85
NEK2-202ENST00000366999 CASC1Q6TDU7 716 aa20.34■□□□□ 0.85
NEK2-202ENST00000366999 SBF2Q86WG5 1849 aa20.34■□□□□ 0.85
NEK2-202ENST00000366999 GLRX3O76003 335 aaKnown RBP20.33■□□□□ 0.84
NEK2-202ENST00000366999 MYT1Q01538 1121 aa20.33■□□□□ 0.84
NEK2-202ENST00000366999 NBR1Q14596 966 aa20.33■□□□□ 0.84
NEK2-202ENST00000366999 AFF2P51816 1311 aa20.32■□□□□ 0.84
NEK2-202ENST00000366999 DBNLQ9UJU6 430 aaKnown RBP20.32■□□□□ 0.84
NEK2-202ENST00000366999 BCORQ6W2J9 1755 aa20.32■□□□□ 0.84
NEK2-202ENST00000366999 LRRC24Q50LG9 513 aa20.32■□□□□ 0.84
NEK2-202ENST00000366999 TNNI3KQ59H18 835 aa20.32■□□□□ 0.84
NEK2-202ENST00000366999 PUS3Q9BZE2 481 aaKnown RBP20.32■□□□□ 0.84
NEK2-202ENST00000366999 ANTXR1Q9H6X2 564 aa20.32■□□□□ 0.84
NEK2-202ENST00000366999 FPGT-TNNI3KV9GXZ4 949 aa20.32■□□□□ 0.84
NEK2-202ENST00000366999 ZBTB38Q8NAP3 1195 aaPredicted RBP20.31■□□□□ 0.84
NEK2-202ENST00000366999 SPRYD3Q8NCJ5 442 aa20.31■□□□□ 0.84
NEK2-202ENST00000366999 CCDC85AQ96PX6 553 aaPredicted RBP20.31■□□□□ 0.84
NEK2-202ENST00000366999 SLKQ9H2G2 1235 aaPredicted RBP20.31■□□□□ 0.84
NEK2-202ENST00000366999 LINC00116Q8NCU8 138 aa20.3■□□□□ 0.84
NEK2-202ENST00000366999 SNX21Q969T3 373 aa20.3■□□□□ 0.84
NEK2-202ENST00000366999 REC8O95072 547 aa20.3■□□□□ 0.84
NEK2-202ENST00000366999 PLA2G12BQ9BX93 195 aa20.3■□□□□ 0.84
NEK2-202ENST00000366999 ERVV-1B6SEH8 477 aa20.29■□□□□ 0.84
NEK2-202ENST00000366999 MEX3CQ5U5Q3 659 aaKnown RBP20.29■□□□□ 0.84
NEK2-202ENST00000366999 ZNF34Q8IZ26 560 aa20.29■□□□□ 0.84
NEK2-202ENST00000366999 CNTROBQ8N137 903 aa20.29■□□□□ 0.84
NEK2-202ENST00000366999 ATRNO75882 1429 aa20.29■□□□□ 0.84
NEK2-202ENST00000366999 GJD4Q96KN9 370 aaPredicted RBP20.29■□□□□ 0.84
NEK2-202ENST00000366999 DBNDD2Q9BQY9 259 aa20.29■□□□□ 0.84
NEK2-202ENST00000366999 CDHR2Q9BYE9 1310 aa20.28■□□□□ 0.84
NEK2-202ENST00000366999 DDX60Q8IY21 1712 aaKnown RBP20.28■□□□□ 0.84
NEK2-202ENST00000366999 CAMTA2O94983 1202 aa20.28■□□□□ 0.84
NEK2-202ENST00000366999 CSF1RP07333 972 aa20.28■□□□□ 0.84
NEK2-202ENST00000366999 SMIM5Q71RC9 77 aa20.28■□□□□ 0.84
NEK2-202ENST00000366999 SMARCC1Q92922 1105 aaPredicted RBP20.28■□□□□ 0.84
NEK2-202ENST00000366999 BOLA2Q9H3K6 86 aa20.28■□□□□ 0.84
NEK2-202ENST00000366999 PALD1Q9ULE6 856 aa20.28■□□□□ 0.84
NEK2-202ENST00000366999 EDC3Q96F86 508 aaKnown RBP20.27■□□□□ 0.84
NEK2-202ENST00000366999 EYA2O00167 538 aa20.27■□□□□ 0.84
NEK2-202ENST00000366999 HSP90AB3PQ58FF7 597 aa20.27■□□□□ 0.84
NEK2-202ENST00000366999 GPATCH3Q96I76 525 aa20.27■□□□□ 0.84
NEK2-202ENST00000366999 TAF1LQ8IZX4 1826 aa20.26■□□□□ 0.83
NEK2-202ENST00000366999 SGSM2O43147 1006 aa20.26■□□□□ 0.83
NEK2-202ENST00000366999 HSCBQ8IWL3 235 aa20.26■□□□□ 0.83
NEK2-202ENST00000366999 ANO2Q9NQ90 1003 aa20.26■□□□□ 0.83
NEK2-202ENST00000366999 NDUFB9Q9Y6M9 179 aa20.26■□□□□ 0.83
NEK2-202ENST00000366999 ZNF609O15014 1411 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms