RNA–Protein interactions for RNA: ENST00000366999.8

NEK2-202, Transcript of NIMA related kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK2, Length 2,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-202ENST00000366999 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.45■□□□□ 0.222e-16■■■■■ 141.2
NEK2-202ENST00000366999 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.09■□□□□ 0.493e-9■■■■■ 134.7
NEK2-202ENST00000366999 SUB1P53999 127 aaKnown RBP eCLIP13.18□□□□□ -0.31e-6■■■■■ 30.7
NEK2-202ENST00000366999 DDX3XO00571 662 aaKnown RBP eCLIP18.05■□□□□ 0.481e-23■■■■□ 26.7
NEK2-202ENST00000366999 NCBP2P52298 156 aaKnown RBP eCLIP15.71■□□□□ 0.117e-7■■■■□ 26.1
NEK2-202ENST00000366999 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.01■□□□□ 0.951e-6■■■■□ 25.6
NEK2-202ENST00000366999 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.74■□□□□ 0.276e-7■■■■□ 21.9
NEK2-202ENST00000366999 PABPC4Q13310 644 aaKnown RBP eCLIP18.56■□□□□ 0.563e-7■■■■□ 21.6
NEK2-202ENST00000366999 KHSRPQ92945 711 aaKnown RBP eCLIP17.54■□□□□ 0.41e-6■■■■□ 21.1
NEK2-202ENST00000366999 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.98■□□□□ 0.153e-17■■■■□ 20.7
NEK2-202ENST00000366999 TIA1P31483 386 aaKnown RBP eCLIP15.98■□□□□ 0.155e-6■■■■□ 20.5
NEK2-202ENST00000366999 SF3B4Q15427 424 aaKnown RBP eCLIP14.18□□□□□ -0.143e-6■■■□□ 17.2
NEK2-202ENST00000366999 AQRO60306 1485 aaKnown RBP eCLIP25.98■■□□□ 1.752e-6■■■□□ 15.6
NEK2-202ENST00000366999 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.79■■□□□ 1.43e-10■■□□□ 13.1
NEK2-202ENST00000366999 EFTUD2Q15029 972 aaKnown RBP eCLIP17.17■□□□□ 0.341e-7■■□□□ 12.9
NEK2-202ENST00000366999 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.46■■□□□ 1.512e-8■■□□□ 12.7
NEK2-202ENST00000366999 YBX3P16989 372 aaKnown RBP eCLIP18.75■□□□□ 0.595e-8■□□□□ 10
NEK2-202ENST00000366999 LSM11P83369 360 aaKnown RBP eCLIP15.53■□□□□ 0.082e-6■□□□□ 9.8
NEK2-202ENST00000366999 ZNF622Q969S3 477 aaKnown RBP eCLIP19.49■□□□□ 0.712e-7■□□□□ 9.6
NEK2-202ENST00000366999 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.4■□□□□ 0.545e-8■□□□□ 9.2
Retrieved 20 of 20 RNA–protein pairs in 5 ms