RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 HDAC9Q9UKV0 1011 aa4.85□□□□□ -1.63
SMC1B-201ENST00000357450 CEP350Q5VT06 3117 aa4.85□□□□□ -1.63
SMC1B-201ENST00000357450 RBBP6Q7Z6E9 1792 aaKnown RBP4.85□□□□□ -1.63
SMC1B-201ENST00000357450 COL5A3P25940 1745 aaPredicted RBP4.85□□□□□ -1.63
SMC1B-201ENST00000357450 CCDC85CA6NKD9 419 aa4.85□□□□□ -1.63
SMC1B-201ENST00000357450 LSM11P83369 360 aaKnown RBP eCLIP4.85□□□□□ -1.63
SMC1B-201ENST00000357450 PRKG1Q13976 671 aa4.85□□□□□ -1.63
SMC1B-201ENST00000357450 TNS4Q8IZW8 715 aa4.85□□□□□ -1.63
SMC1B-201ENST00000357450 CARD10Q9BWT7 1032 aa4.85□□□□□ -1.63
SMC1B-201ENST00000357450 CACNA1GO43497 2377 aa4.85□□□□□ -1.63
SMC1B-201ENST00000357450 ADAMTS13Q76LX8 1427 aa4.84□□□□□ -1.63
SMC1B-201ENST00000357450 SNPHO15079 494 aa4.84□□□□□ -1.63
SMC1B-201ENST00000357450 C2CD5Q86YS7 1000 aa4.84□□□□□ -1.63
SMC1B-201ENST00000357450 NFATC2IPQ8NCF5 419 aa4.84□□□□□ -1.63
SMC1B-201ENST00000357450 MKRN1Q9UHC7 482 aaKnown RBP4.84□□□□□ -1.63
SMC1B-201ENST00000357450 SPATA31A5Q5VU36 1347 aa4.84□□□□□ -1.63
SMC1B-201ENST00000357450 SPATA31A7Q8IWB4 1347 aa4.84□□□□□ -1.63
SMC1B-201ENST00000357450 PIM2Q9P1W9 311 aa4.84□□□□□ -1.63
SMC1B-201ENST00000357450 ANKIB1Q9P2G1 1089 aa4.84□□□□□ -1.63
SMC1B-201ENST00000357450 THRAP3Q9Y2W1 955 aaKnown RBP4.84□□□□□ -1.63
SMC1B-201ENST00000357450 DDX60LQ5H9U9 1706 aaKnown RBP4.84□□□□□ -1.63
SMC1B-201ENST00000357450 ATP10DQ9P241 1426 aa4.84□□□□□ -1.63
SMC1B-201ENST00000357450 SPATA31A1Q5TZJ5 1347 aa4.84□□□□□ -1.63
SMC1B-201ENST00000357450 WDR17Q8IZU2 1322 aa4.84□□□□□ -1.63
SMC1B-201ENST00000357450 PBX2P40425 430 aa4.84□□□□□ -1.64
SMC1B-201ENST00000357450 RIC3Q7Z5B4 369 aa4.84□□□□□ -1.64
SMC1B-201ENST00000357450 CNBD1Q8NA66 436 aa4.84□□□□□ -1.64
SMC1B-201ENST00000357450 ZBTB3Q9H5J0 574 aa4.84□□□□□ -1.64
SMC1B-201ENST00000357450 TTC21AQ8NDW8 1320 aa4.83□□□□□ -1.64
SMC1B-201ENST00000357450 LOC102724428A0A0B4J2F2 783 aa4.83□□□□□ -1.64
SMC1B-201ENST00000357450 SEC24BO95487 1268 aa4.83□□□□□ -1.64
SMC1B-201ENST00000357450 SIK1P57059 783 aa4.83□□□□□ -1.64
SMC1B-201ENST00000357450 NEXNQ0ZGT2 675 aa4.83□□□□□ -1.64
SMC1B-201ENST00000357450 TSPYL4Q9UJ04 414 aa4.83□□□□□ -1.64
SMC1B-201ENST00000357450 ZNF831Q5JPB2 1677 aa4.83□□□□□ -1.64
SMC1B-201ENST00000357450 PCDH11XQ9BZA7 1347 aa4.83□□□□□ -1.64
SMC1B-201ENST00000357450 PCDH11YQ9BZA8 1340 aa4.83□□□□□ -1.64
SMC1B-201ENST00000357450 BTBD11A6QL63 1104 aa4.83□□□□□ -1.64
SMC1B-201ENST00000357450 FOCADQ5VW36 1801 aa4.83□□□□□ -1.64
SMC1B-201ENST00000357450 ABCC6O95255 1503 aa4.83□□□□□ -1.64
SMC1B-201ENST00000357450 NUTM1Q86Y26 1132 aa4.83□□□□□ -1.64
SMC1B-201ENST00000357450 CCDC146Q8IYE0 955 aa4.83□□□□□ -1.64
SMC1B-201ENST00000357450 MARCH10Q8NA82 808 aaPredicted RBP4.83□□□□□ -1.64
SMC1B-201ENST00000357450 TRIM34Q9BYJ4 488 aa4.83□□□□□ -1.64
SMC1B-201ENST00000357450 NIP7Q9Y221 180 aaKnown RBP eCLIP4.83□□□□□ -1.64
SMC1B-201ENST00000357450 GAS2L2Q8NHY3 880 aa4.83□□□□□ -1.64
SMC1B-201ENST00000357450 ABCC11Q96J66 1382 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 DOK7Q18PE1 504 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 AMOTQ4VCS5 1084 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 TNS3Q68CZ2 1445 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 IP6K1Q92551 441 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 CDCA7LQ96GN5 454 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 MRS2Q9HD23 443 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 MIS18AQ9NYP9 233 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 VPS9D1Q9Y2B5 631 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 POLR3AO14802 1390 aaPredicted RBP4.82□□□□□ -1.64
SMC1B-201ENST00000357450 MAP3K19Q56UN5 1328 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 RIMBP2O15034 1052 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 NF2P35240 595 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 C1QTNF8P60827 252 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 C9orf131Q5VYM1 1079 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 TPTE2Q6XPS3 522 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 BCL2L12Q9HB09 334 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 ASAP1Q9ULH1 1129 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 LTBP1Q14766 1721 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 OVOS2A0A0J9YW53 1432 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 OVOS2Q6IE36 1432 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 PRKAR2BP31323 418 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 SLC4A3P48751 1232 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 WDR78Q5VTH9 848 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 SLC16A10Q8TF71 515 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 NRAPQ86VF7 1730 aa4.82□□□□□ -1.64
SMC1B-201ENST00000357450 SLIT3O75094 1523 aa4.81□□□□□ -1.64
SMC1B-201ENST00000357450 A0A087WZG4 1122 aa4.81□□□□□ -1.64
SMC1B-201ENST00000357450 C21orf2O43822 256 aa4.81□□□□□ -1.64
SMC1B-201ENST00000357450 DDX46Q7L014 1031 aaKnown RBP4.81□□□□□ -1.64
SMC1B-201ENST00000357450 RRAGCQ9HB90 399 aa4.81□□□□□ -1.64
SMC1B-201ENST00000357450 FAM198AQ9UFP1 575 aa4.81□□□□□ -1.64
SMC1B-201ENST00000357450 NSFL1CQ9UNZ2 370 aaKnown RBP4.81□□□□□ -1.64
SMC1B-201ENST00000357450 AFDNP55196 1824 aaKnown RBP4.81□□□□□ -1.64
SMC1B-201ENST00000357450 LRP5O75197 1615 aa4.81□□□□□ -1.64
SMC1B-201ENST00000357450 ZNF784Q8NCA9 323 aaPredicted RBP4.81□□□□□ -1.64
SMC1B-201ENST00000357450 TRMT112Q9UI30 125 aaKnown RBP4.81□□□□□ -1.64
SMC1B-201ENST00000357450 AXIN2Q9Y2T1 843 aa4.81□□□□□ -1.64
SMC1B-201ENST00000357450 IGSF1Q8N6C5 1336 aa4.81□□□□□ -1.64
SMC1B-201ENST00000357450 TULP1O00294 542 aaPredicted RBP4.81□□□□□ -1.64
SMC1B-201ENST00000357450 CHRNA5P30532 468 aa4.81□□□□□ -1.64
SMC1B-201ENST00000357450 HOXC9P31274 260 aa4.81□□□□□ -1.64
SMC1B-201ENST00000357450 USPL1Q5W0Q7 1092 aa4.81□□□□□ -1.64
SMC1B-201ENST00000357450 DZIP3Q86Y13 1208 aaKnown RBP4.81□□□□□ -1.64
SMC1B-201ENST00000357450 ZSCAN29Q8IWY8 852 aaPredicted RBP4.81□□□□□ -1.64
SMC1B-201ENST00000357450 DNAJC10Q8IXB1 793 aa4.81□□□□□ -1.64
SMC1B-201ENST00000357450 PDGFDQ9GZP0 370 aaPredicted RBP4.81□□□□□ -1.64
SMC1B-201ENST00000357450 SRP68Q9UHB9 627 aaKnown RBP4.81□□□□□ -1.64
SMC1B-201ENST00000357450 PRR36Q9H6K5 1346 aa4.81□□□□□ -1.64
SMC1B-201ENST00000357450 ARHGEF25Q86VW2 580 aa4.8□□□□□ -1.64
SMC1B-201ENST00000357450 OGFOD1Q8N543 542 aa4.8□□□□□ -1.64
SMC1B-201ENST00000357450 TTLL6Q8N841 843 aa4.8□□□□□ -1.64
SMC1B-201ENST00000357450 COL9A1P20849 921 aa4.8□□□□□ -1.64
SMC1B-201ENST00000357450 MKRN3Q13064 507 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms