RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 SMC3Q9UQE7 1217 aa5.7□□□□□ -1.5
ZNF560-201ENST00000301480 NAT1P18440 290 aa5.69□□□□□ -1.5
ZNF560-201ENST00000301480 LIG1P18858 919 aa5.69□□□□□ -1.5
ZNF560-201ENST00000301480 SF3A1Q15459 793 aaKnown RBP5.69□□□□□ -1.5
ZNF560-201ENST00000301480 UVSSAQ2YD98 709 aa5.69□□□□□ -1.5
ZNF560-201ENST00000301480 CD163L1Q9NR16 1453 aa5.69□□□□□ -1.5
ZNF560-201ENST00000301480 PSDA5PKW4 1024 aaPredicted RBP5.69□□□□□ -1.5
ZNF560-201ENST00000301480 MPHOSPH10O00566 681 aaKnown RBP5.69□□□□□ -1.5
ZNF560-201ENST00000301480 U2SURPO15042 1029 aaKnown RBP5.69□□□□□ -1.5
ZNF560-201ENST00000301480 GYS2P54840 703 aa5.69□□□□□ -1.5
ZNF560-201ENST00000301480 IRX5P78411 483 aaPredicted RBP5.69□□□□□ -1.5
ZNF560-201ENST00000301480 SMC5Q8IY18 1101 aa5.69□□□□□ -1.5
ZNF560-201ENST00000301480 MARCH10Q8NA82 808 aaPredicted RBP5.69□□□□□ -1.5
ZNF560-201ENST00000301480 TPX2Q9ULW0 747 aaKnown RBP5.69□□□□□ -1.5
ZNF560-201ENST00000301480 PDZRN3Q9UPQ7 1066 aa5.69□□□□□ -1.5
ZNF560-201ENST00000301480 NHSQ6T4R5 1651 aa5.69□□□□□ -1.5
ZNF560-201ENST00000301480 NSD2O96028 1365 aa5.68□□□□□ -1.5
ZNF560-201ENST00000301480 ANKRD36BQ8N2N9 1353 aa5.68□□□□□ -1.5
ZNF560-201ENST00000301480 CCDC194A0A1B0GVG4 234 aa5.68□□□□□ -1.5
ZNF560-201ENST00000301480 HDGFL1Q5TGJ6 251 aa5.68□□□□□ -1.5
ZNF560-201ENST00000301480 C11orf96Q7Z7L8 435 aa5.68□□□□□ -1.5
ZNF560-201ENST00000301480 RPAINQ86UA6 219 aa5.68□□□□□ -1.5
ZNF560-201ENST00000301480 MTFR1LQ9H019 292 aa5.68□□□□□ -1.5
ZNF560-201ENST00000301480 IRF2BPLQ9H1B7 796 aa5.68□□□□□ -1.5
ZNF560-201ENST00000301480 SBF2Q86WG5 1849 aa5.68□□□□□ -1.5
ZNF560-201ENST00000301480 ZRANB2O95218 330 aaKnown RBP eCLIP5.68□□□□□ -1.5
ZNF560-201ENST00000301480 ZSCAN20P17040 1043 aaPredicted RBP5.68□□□□□ -1.5
ZNF560-201ENST00000301480 CAPN2P17655 700 aa5.68□□□□□ -1.5
ZNF560-201ENST00000301480 PDE6BP35913 854 aa5.68□□□□□ -1.5
ZNF560-201ENST00000301480 SLC15A2Q16348 729 aa5.68□□□□□ -1.5
ZNF560-201ENST00000301480 TXNRD1Q16881 649 aa5.68□□□□□ -1.5
ZNF560-201ENST00000301480 MICALL1Q8N3F8 863 aa5.68□□□□□ -1.5
ZNF560-201ENST00000301480 COG3Q96JB2 828 aa5.68□□□□□ -1.5
ZNF560-201ENST00000301480 GNL3LQ9NVN8 582 aaKnown RBP5.68□□□□□ -1.5
ZNF560-201ENST00000301480 AXIN2Q9Y2T1 843 aa5.68□□□□□ -1.5
ZNF560-201ENST00000301480 CASZ1Q86V15 1759 aa5.68□□□□□ -1.5
ZNF560-201ENST00000301480 CARNS1A5YM72 827 aa5.67□□□□□ -1.5
ZNF560-201ENST00000301480 SMAPO00193 183 aa5.67□□□□□ -1.5
ZNF560-201ENST00000301480 TMF1P82094 1093 aa5.67□□□□□ -1.5
ZNF560-201ENST00000301480 DRC1Q96MC2 740 aa5.67□□□□□ -1.5
ZNF560-201ENST00000301480 FAM13BQ9NYF5 915 aa5.67□□□□□ -1.5
ZNF560-201ENST00000301480 CEP126Q9P2H0 1117 aa5.67□□□□□ -1.5
ZNF560-201ENST00000301480 SMG6Q86US8 1419 aaKnown RBP5.67□□□□□ -1.5
ZNF560-201ENST00000301480 CFAP69A5D8W1 941 aa5.67□□□□□ -1.5
ZNF560-201ENST00000301480 WDHD1O75717 1129 aaPredicted RBP5.67□□□□□ -1.5
ZNF560-201ENST00000301480 GSE1Q14687 1217 aa5.67□□□□□ -1.5
ZNF560-201ENST00000301480 QSER1Q2KHR3 1735 aa5.66□□□□□ -1.5
ZNF560-201ENST00000301480 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.66□□□□□ -1.5
ZNF560-201ENST00000301480 COQ9O75208 318 aa5.66□□□□□ -1.5
ZNF560-201ENST00000301480 IGHDP01880 384 aa5.66□□□□□ -1.5
ZNF560-201ENST00000301480 FLAD1Q8NFF5 587 aa5.66□□□□□ -1.5
ZNF560-201ENST00000301480 ANKRD24Q8TF21 1146 aa5.66□□□□□ -1.5
ZNF560-201ENST00000301480 CCDC85AQ96PX6 553 aaPredicted RBP5.66□□□□□ -1.5
ZNF560-201ENST00000301480 TESK2Q96S53 571 aa5.66□□□□□ -1.5
ZNF560-201ENST00000301480 SIN3AQ96ST3 1273 aa5.66□□□□□ -1.5
ZNF560-201ENST00000301480 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.66□□□□□ -1.5
ZNF560-201ENST00000301480 A0A1W2PP64 1363 aa5.66□□□□□ -1.5
ZNF560-201ENST00000301480 NSD3Q9BZ95 1437 aa5.66□□□□□ -1.5
ZNF560-201ENST00000301480 PES1O00541 588 aaKnown RBP5.66□□□□□ -1.5
ZNF560-201ENST00000301480 LETM1O95202 739 aaPredicted RBP5.66□□□□□ -1.5
ZNF560-201ENST00000301480 CCDC172P0C7W6 258 aa5.66□□□□□ -1.5
ZNF560-201ENST00000301480 PAX7P23759 505 aa5.66□□□□□ -1.5
ZNF560-201ENST00000301480 FAM182BQ5T319 152 aa5.66□□□□□ -1.5
ZNF560-201ENST00000301480 IFFO2Q5TF58 517 aa5.66□□□□□ -1.5
ZNF560-201ENST00000301480 ARPC5LQ9BPX5 153 aa5.66□□□□□ -1.5
ZNF560-201ENST00000301480 PAIP2Q9BPZ3 127 aaKnown RBP5.66□□□□□ -1.5
ZNF560-201ENST00000301480 RBM28Q9NW13 759 aaKnown RBP5.66□□□□□ -1.5
ZNF560-201ENST00000301480 ANAPC4Q9UJX5 808 aa5.66□□□□□ -1.5
ZNF560-201ENST00000301480 CCDC189A1A4V9 331 aa5.65□□□□□ -1.5
ZNF560-201ENST00000301480 FAM117AQ9C073 453 aa5.65□□□□□ -1.5
ZNF560-201ENST00000301480 NLRP2Q9NX02 1062 aa5.65□□□□□ -1.5
ZNF560-201ENST00000301480 PAPPAQ13219 1627 aa5.65□□□□□ -1.5
ZNF560-201ENST00000301480 EP400Q96L91 3159 aa5.65□□□□□ -1.5
ZNF560-201ENST00000301480 TPM2P07951 284 aa5.65□□□□□ -1.51
ZNF560-201ENST00000301480 FAM200BP0CF97 657 aa5.65□□□□□ -1.51
ZNF560-201ENST00000301480 MS4A1P11836 297 aa5.65□□□□□ -1.51
ZNF560-201ENST00000301480 TTC30AQ86WT1 665 aa5.65□□□□□ -1.51
ZNF560-201ENST00000301480 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.65□□□□□ -1.51
ZNF560-201ENST00000301480 AMOTL1Q8IY63 956 aa5.65□□□□□ -1.51
ZNF560-201ENST00000301480 PROM2Q8N271 834 aa5.65□□□□□ -1.51
ZNF560-201ENST00000301480 TMC1Q8TDI8 760 aa5.65□□□□□ -1.51
ZNF560-201ENST00000301480 SREK1Q8WXA9 508 aaKnown RBP5.65□□□□□ -1.51
ZNF560-201ENST00000301480 MRRFQ96E11 262 aaKnown RBP5.65□□□□□ -1.51
ZNF560-201ENST00000301480 MAP7D2Q96T17 732 aa5.65□□□□□ -1.51
ZNF560-201ENST00000301480 MYCBPQ99417 103 aaPredicted RBP5.65□□□□□ -1.51
ZNF560-201ENST00000301480 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.65□□□□□ -1.51
ZNF560-201ENST00000301480 KLF15Q9UIH9 416 aa5.65□□□□□ -1.51
ZNF560-201ENST00000301480 INSRP06213 1382 aa5.64□□□□□ -1.51
ZNF560-201ENST00000301480 NAP1L1P55209 391 aaKnown RBP5.64□□□□□ -1.51
ZNF560-201ENST00000301480 PPP4CP60510 307 aa5.64□□□□□ -1.51
ZNF560-201ENST00000301480 NME9Q86XW9 330 aa5.64□□□□□ -1.51
ZNF560-201ENST00000301480 SLC12A5Q9H2X9 1139 aa5.64□□□□□ -1.51
ZNF560-201ENST00000301480 MAP3K20Q9NYL2 800 aaKnown RBP5.64□□□□□ -1.51
ZNF560-201ENST00000301480 FAN1Q9Y2M0 1017 aa5.64□□□□□ -1.51
ZNF560-201ENST00000301480 COL24A1Q17RW2 1714 aa5.64□□□□□ -1.51
ZNF560-201ENST00000301480 NAT2P11245 290 aa5.64□□□□□ -1.51
ZNF560-201ENST00000301480 LMNB1P20700 586 aa5.64□□□□□ -1.51
ZNF560-201ENST00000301480 HOXC9P31274 260 aa5.64□□□□□ -1.51
ZNF560-201ENST00000301480 CLCN1P35523 988 aa5.64□□□□□ -1.51
ZNF560-201ENST00000301480 PTGER2P43116 358 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms